RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 NPATQ14207 1427 aa28.64■■■□□ 2.17
COLCA2-201ENST00000398035 ADGRL2O95490 1459 aa28.63■■■□□ 2.17
COLCA2-201ENST00000398035 ROCK1Q13464 1354 aa28.61■■■□□ 2.17
COLCA2-201ENST00000398035 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
COLCA2-201ENST00000398035 CROCC2H7BZ55 1655 aa28.6■■■□□ 2.17
COLCA2-201ENST00000398035 ITGAEP38570 1179 aa28.6■■■□□ 2.17
COLCA2-201ENST00000398035 LMTK3Q96Q04 1460 aa28.59■■■□□ 2.17
COLCA2-201ENST00000398035 UHRF1BP1Q6BDS2 1440 aa28.59■■■□□ 2.17
COLCA2-201ENST00000398035 EIF2AK4Q9P2K8 1649 aaKnown RBP28.58■■■□□ 2.17
COLCA2-201ENST00000398035 KDM5DQ9BY66 1539 aa28.57■■■□□ 2.16
COLCA2-201ENST00000398035 KANK1Q14678 1352 aa28.57■■■□□ 2.16
COLCA2-201ENST00000398035 MROH2AA6NES4 1674 aa28.56■■■□□ 2.16
COLCA2-201ENST00000398035 PTPRKQ15262 1439 aa28.56■■■□□ 2.16
COLCA2-201ENST00000398035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.55■■■□□ 2.162e-6■□□□□ 10.7
COLCA2-201ENST00000398035 ANKRD50Q9ULJ7 1429 aa28.54■■■□□ 2.16
COLCA2-201ENST00000398035 HSPA2P54652 639 aa28.52■■■□□ 2.16
COLCA2-201ENST00000398035 C3P01024 1663 aa28.52■■■□□ 2.16
COLCA2-201ENST00000398035 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.15
COLCA2-201ENST00000398035 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.15
COLCA2-201ENST00000398035 CLTCQ00610 1675 aaKnown RBP28.5■■■□□ 2.15
COLCA2-201ENST00000398035 FBXO31Q5XUX0 539 aaPredicted RBP28.49■■■□□ 2.15
COLCA2-201ENST00000398035 PZPP20742 1482 aa28.48■■■□□ 2.15
COLCA2-201ENST00000398035 ABCC3O15438 1527 aa28.45■■■□□ 2.14
COLCA2-201ENST00000398035 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
COLCA2-201ENST00000398035 TNRQ92752 1358 aa28.43■■■□□ 2.14
COLCA2-201ENST00000398035 PREX1Q8TCU6 1659 aa28.43■■■□□ 2.14
COLCA2-201ENST00000398035 PRDM15P57071 1507 aaPredicted RBP28.42■■■□□ 2.14
COLCA2-201ENST00000398035 ARHGAP31Q2M1Z3 1444 aa28.41■■■□□ 2.14
COLCA2-201ENST00000398035 MROH1Q8NDA8 1641 aa28.4■■■□□ 2.14
COLCA2-201ENST00000398035 ZC3H13Q5T200 1668 aaKnown RBP28.39■■■□□ 2.13
COLCA2-201ENST00000398035 LMTK2Q8IWU2 1503 aa28.34■■■□□ 2.13
COLCA2-201ENST00000398035 DEPDC5O75140 1603 aa28.34■■■□□ 2.13
COLCA2-201ENST00000398035 THEMISQ8N1K5 641 aaPredicted RBP28.34■■■□□ 2.13
COLCA2-201ENST00000398035 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
COLCA2-201ENST00000398035 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
COLCA2-201ENST00000398035 VWDEQ8N2E2 1590 aa28.3■■■□□ 2.12
COLCA2-201ENST00000398035 NUP155O75694 1391 aa28.29■■■□□ 2.12
COLCA2-201ENST00000398035 PKD2Q13563 968 aa28.29■■■□□ 2.12
COLCA2-201ENST00000398035 ERVK-7P63135 1459 aa28.28■■■□□ 2.12
COLCA2-201ENST00000398035 SPATA31D1Q6ZQQ2 1576 aa28.27■■■□□ 2.12
COLCA2-201ENST00000398035 NAIPQ13075 1403 aa28.26■■■□□ 2.11
COLCA2-201ENST00000398035 CEP170BQ9Y4F5 1589 aaPredicted RBP28.26■■■□□ 2.11
COLCA2-201ENST00000398035 HFM1A2PYH4 1435 aa28.25■■■□□ 2.11
COLCA2-201ENST00000398035 CAMSAP1Q5T5Y3 1602 aa28.24■■■□□ 2.11
COLCA2-201ENST00000398035 SLC52A1Q9NWF4 448 aa28.24■■■□□ 2.11
COLCA2-201ENST00000398035 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
COLCA2-201ENST00000398035 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
COLCA2-201ENST00000398035 RPRD2Q5VT52 1461 aaKnown RBP28.22■■■□□ 2.11
COLCA2-201ENST00000398035 ANKLE2Q86XL3 938 aa28.21■■■□□ 2.11
COLCA2-201ENST00000398035 ACIN1Q9UKV3 1341 aaKnown RBP28.21■■■□□ 2.11
COLCA2-201ENST00000398035 PTPRTO14522 1441 aa28.2■■■□□ 2.1
COLCA2-201ENST00000398035 CEP152O94986 1710 aa28.19■■■□□ 2.1
COLCA2-201ENST00000398035 STAG3Q9UJ98 1225 aa28.18■■■□□ 2.1
COLCA2-201ENST00000398035 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
COLCA2-201ENST00000398035 UNC13BO14795 1591 aa28.18■■■□□ 2.1
COLCA2-201ENST00000398035 ZNF142P52746 1687 aaPredicted RBP28.17■■■□□ 2.1
COLCA2-201ENST00000398035 UGGT1Q9NYU2 1555 aa28.17■■■□□ 2.1
COLCA2-201ENST00000398035 IDI1Q13907 227 aa28.17■■■□□ 2.1
COLCA2-201ENST00000398035 EFCAB6Q5THR3 1501 aa28.16■■■□□ 2.1
COLCA2-201ENST00000398035 NOS1P29475 1434 aa28.16■■■□□ 2.1
COLCA2-201ENST00000398035 TRIM52Q96A61 297 aa28.15■■■□□ 2.1
COLCA2-201ENST00000398035 TET3O43151 1660 aa28.09■■■□□ 2.09
COLCA2-201ENST00000398035 EID1Q9Y6B2 187 aa28.09■■■□□ 2.09
COLCA2-201ENST00000398035 IQGAP3Q86VI3 1631 aa28.07■■■□□ 2.08
COLCA2-201ENST00000398035 STRCQ7RTU9 1775 aa28.07■■■□□ 2.08
COLCA2-201ENST00000398035 HDGFP51858 240 aaKnown RBP28.05■■■□□ 2.08
COLCA2-201ENST00000398035 TXNDC2Q86VQ3 553 aa28.04■■■□□ 2.08
COLCA2-201ENST00000398035 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
COLCA2-201ENST00000398035 SETD5Q9C0A6 1442 aa28.02■■■□□ 2.08
COLCA2-201ENST00000398035 GCC2Q8IWJ2 1684 aa28.02■■■□□ 2.08
COLCA2-201ENST00000398035 TMEM2Q9UHN6 1383 aa28.01■■■□□ 2.07
COLCA2-201ENST00000398035 MED14O60244 1454 aa27.98■■■□□ 2.07
COLCA2-201ENST00000398035 SYNMO15061 1565 aa27.98■■■□□ 2.07
COLCA2-201ENST00000398035 CFAP65Q6ZU64 1925 aaKnown RBP27.97■■■□□ 2.07
COLCA2-201ENST00000398035 CERKQ8TCT0 537 aa27.97■■■□□ 2.07
COLCA2-201ENST00000398035 LTKP29376 864 aa27.96■■■□□ 2.07
COLCA2-201ENST00000398035 ARHGAP23Q9P227 1491 aa27.96■■■□□ 2.07
COLCA2-201ENST00000398035 NPHP4O75161 1426 aaPredicted RBP27.96■■■□□ 2.07
COLCA2-201ENST00000398035 SLIT1O75093 1534 aa27.96■■■□□ 2.07
COLCA2-201ENST00000398035 CHGAP10645 457 aaKnown RBP27.95■■■□□ 2.07
COLCA2-201ENST00000398035 HRCP23327 699 aa27.95■■■□□ 2.07
COLCA2-201ENST00000398035 SCAF11Q99590 1463 aaKnown RBP27.93■■■□□ 2.06
COLCA2-201ENST00000398035 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.92■■■□□ 2.06
COLCA2-201ENST00000398035 MPHOSPH9Q99550 1183 aa27.92■■■□□ 2.06
COLCA2-201ENST00000398035 E9PCH4 1651 aa27.92■■■□□ 2.06
COLCA2-201ENST00000398035 UBR1Q8IWV7 1749 aa27.91■■■□□ 2.06
COLCA2-201ENST00000398035 PIK3C2BO00750 1634 aa27.91■■■□□ 2.06
COLCA2-201ENST00000398035 KDM5AP29375 1690 aaKnown RBP27.9■■■□□ 2.06
COLCA2-201ENST00000398035 ADGRB3O60242 1522 aa27.89■■■□□ 2.05
COLCA2-201ENST00000398035 ZNF335Q9H4Z2 1342 aaPredicted RBP27.89■■■□□ 2.05
COLCA2-201ENST00000398035 FBXO41Q8TF61 875 aa27.87■■■□□ 2.05
COLCA2-201ENST00000398035 RAB3GAP2Q9H2M9 1393 aa27.87■■■□□ 2.05
COLCA2-201ENST00000398035 NEURL4Q96JN8 1562 aa27.86■■■□□ 2.05
COLCA2-201ENST00000398035 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
COLCA2-201ENST00000398035 BCANQ96GW7 911 aa27.83■■■□□ 2.05
COLCA2-201ENST00000398035 RIMS2Q9UQ26 1411 aa27.81■■■□□ 2.04
COLCA2-201ENST00000398035 POLR1AO95602 1720 aaPredicted RBP27.8■■■□□ 2.04
COLCA2-201ENST00000398035 ZNF326Q5BKZ1 582 aaKnown RBP27.8■■■□□ 2.04
COLCA2-201ENST00000398035 ZFYVE9O95405 1425 aa27.79■■■□□ 2.04
COLCA2-201ENST00000398035 LTBP4Q8N2S1 1624 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms