RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 E9PCH4 1651 aa16.44■□□□□ 0.22
NUP98-205ENST00000397007 PIK3C2BO00750 1634 aa16.42■□□□□ 0.22
NUP98-205ENST00000397007 ZNF142P52746 1687 aaPredicted RBP16.42■□□□□ 0.22
NUP98-205ENST00000397007 KDM5AP29375 1690 aaKnown RBP16.42■□□□□ 0.22
NUP98-205ENST00000397007 RIMS1Q86UR5 1692 aaKnown RBP16.42■□□□□ 0.22
NUP98-205ENST00000397007 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
NUP98-205ENST00000397007 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
NUP98-205ENST00000397007 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
NUP98-205ENST00000397007 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
NUP98-205ENST00000397007 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
NUP98-205ENST00000397007 PPARGC1BQ86YN6 1023 aaKnown RBP16.39■□□□□ 0.21
NUP98-205ENST00000397007 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
NUP98-205ENST00000397007 ARHGAP31Q2M1Z3 1444 aa16.37■□□□□ 0.21
NUP98-205ENST00000397007 PZPP20742 1482 aa16.36■□□□□ 0.21
NUP98-205ENST00000397007 ZNF777Q9ULD5 760 aaPredicted RBP16.36■□□□□ 0.21
NUP98-205ENST00000397007 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
NUP98-205ENST00000397007 SPHKAPQ2M3C7 1700 aa16.35■□□□□ 0.21
NUP98-205ENST00000397007 SYNMO15061 1565 aa16.33■□□□□ 0.2
NUP98-205ENST00000397007 NEURL4Q96JN8 1562 aa16.32■□□□□ 0.2
NUP98-205ENST00000397007 MYO3AQ8NEV4 1616 aa16.32■□□□□ 0.2
NUP98-205ENST00000397007 RPRD2Q5VT52 1461 aaKnown RBP16.31■□□□□ 0.2
NUP98-205ENST00000397007 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
NUP98-205ENST00000397007 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
NUP98-205ENST00000397007 HRCP23327 699 aa16.29■□□□□ 0.2
NUP98-205ENST00000397007 PTPRMP28827 1452 aa16.28■□□□□ 0.2
NUP98-205ENST00000397007 IFT172Q9UG01 1749 aa16.28■□□□□ 0.2
NUP98-205ENST00000397007 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
NUP98-205ENST00000397007 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 PTPRTO14522 1441 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 NOS1P29475 1434 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 UBR1Q8IWV7 1749 aa16.26■□□□□ 0.19
NUP98-205ENST00000397007 NPATQ14207 1427 aa16.25■□□□□ 0.19
NUP98-205ENST00000397007 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
NUP98-205ENST00000397007 TRPM2O94759 1503 aa16.25■□□□□ 0.19
NUP98-205ENST00000397007 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
NUP98-205ENST00000397007 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
NUP98-205ENST00000397007 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
NUP98-205ENST00000397007 TMEM131LA2VDJ0 1609 aa16.21■□□□□ 0.19
NUP98-205ENST00000397007 CLTCL1P53675 1640 aa16.21■□□□□ 0.19
NUP98-205ENST00000397007 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
NUP98-205ENST00000397007 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
NUP98-205ENST00000397007 SETD1BQ9UPS6 1966 aaKnown RBP16.18■□□□□ 0.18
NUP98-205ENST00000397007 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
NUP98-205ENST00000397007 TRIM26Q12899 539 aaPredicted RBP16.16■□□□□ 0.18
NUP98-205ENST00000397007 CHIC2Q9UKJ5 165 aa16.16■□□□□ 0.18
NUP98-205ENST00000397007 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
NUP98-205ENST00000397007 CEP170BQ9Y4F5 1589 aaPredicted RBP16.15■□□□□ 0.18
NUP98-205ENST00000397007 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
NUP98-205ENST00000397007 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
NUP98-205ENST00000397007 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.18
NUP98-205ENST00000397007 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.17
NUP98-205ENST00000397007 ZMYM3Q14202 1370 aa16.14■□□□□ 0.17
NUP98-205ENST00000397007 PPLO60437 1756 aa16.14■□□□□ 0.17
NUP98-205ENST00000397007 KIF1BO60333 1816 aa16.14■□□□□ 0.17
NUP98-205ENST00000397007 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.17
NUP98-205ENST00000397007 SLIT1O75093 1534 aa16.11■□□□□ 0.17
NUP98-205ENST00000397007 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
NUP98-205ENST00000397007 KIF3BO15066 747 aa16.1■□□□□ 0.17
NUP98-205ENST00000397007 ARHGAP23Q9P227 1491 aa16.1■□□□□ 0.17
NUP98-205ENST00000397007 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
NUP98-205ENST00000397007 NRXN3Q9Y4C0 1643 aa16.08■□□□□ 0.17
NUP98-205ENST00000397007 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
NUP98-205ENST00000397007 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
NUP98-205ENST00000397007 SPATA31E1Q6ZUB1 1445 aa16.04■□□□□ 0.16
NUP98-205ENST00000397007 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
NUP98-205ENST00000397007 NUP155O75694 1391 aa16.04■□□□□ 0.16
NUP98-205ENST00000397007 ANKRD30BQ9BXX2 1392 aa16.04■□□□□ 0.16
NUP98-205ENST00000397007 KANK1Q14678 1352 aa16.03■□□□□ 0.16
NUP98-205ENST00000397007 ZFYVE9O95405 1425 aa16.02■□□□□ 0.16
NUP98-205ENST00000397007 NRXN1Q9ULB1 1477 aa16.02■□□□□ 0.16
NUP98-205ENST00000397007 MED14O60244 1454 aa16.01■□□□□ 0.15
NUP98-205ENST00000397007 ITGAEP38570 1179 aa15.99■□□□□ 0.15
NUP98-205ENST00000397007 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
NUP98-205ENST00000397007 IQGAP1P46940 1657 aa15.98■□□□□ 0.15
NUP98-205ENST00000397007 SETBP1Q9Y6X0 1596 aa15.98■□□□□ 0.15
NUP98-205ENST00000397007 WASHC2CQ9Y4E1 1318 aa15.97■□□□□ 0.15
NUP98-205ENST00000397007 TNRQ92752 1358 aa15.97■□□□□ 0.15
NUP98-205ENST00000397007 GGT6Q6P531 493 aa15.97■□□□□ 0.15
NUP98-205ENST00000397007 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
NUP98-205ENST00000397007 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
NUP98-205ENST00000397007 MYOM2P54296 1465 aa15.93■□□□□ 0.14
NUP98-205ENST00000397007 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
NUP98-205ENST00000397007 ARID4BQ4LE39 1312 aaPredicted RBP15.93■□□□□ 0.14
NUP98-205ENST00000397007 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
NUP98-205ENST00000397007 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
NUP98-205ENST00000397007 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
NUP98-205ENST00000397007 LAMC1P11047 1609 aa15.92■□□□□ 0.14
NUP98-205ENST00000397007 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
NUP98-205ENST00000397007 UHRF1BP1Q6BDS2 1440 aa15.91■□□□□ 0.14
NUP98-205ENST00000397007 CHD2O14647 1828 aaKnown RBP15.91■□□□□ 0.14
NUP98-205ENST00000397007 XIRP1Q702N8 1843 aaKnown RBP15.91■□□□□ 0.14
NUP98-205ENST00000397007 CEBPAP49715 358 aaPredicted RBP15.9■□□□□ 0.14
NUP98-205ENST00000397007 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
NUP98-205ENST00000397007 MLECQ14165 292 aa15.89■□□□□ 0.13
NUP98-205ENST00000397007 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
NUP98-205ENST00000397007 TRPM1Q7Z4N2 1603 aa15.88■□□□□ 0.13
NUP98-205ENST00000397007 ASXL1Q8IXJ9 1541 aa15.87■□□□□ 0.13
NUP98-205ENST00000397007 PKD2Q13563 968 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms