RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 KDM5DQ9BY66 1539 aa27■■□□□ 1.91
UPK3A-202ENST00000396082 NPATQ14207 1427 aa26.99■■□□□ 1.91
UPK3A-202ENST00000396082 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
UPK3A-202ENST00000396082 FAM135AQ9P2D6 1515 aa26.99■■□□□ 1.91
UPK3A-202ENST00000396082 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
UPK3A-202ENST00000396082 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
UPK3A-202ENST00000396082 WASHC2CQ9Y4E1 1318 aa26.96■■□□□ 1.91
UPK3A-202ENST00000396082 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
UPK3A-202ENST00000396082 CHIC2Q9UKJ5 165 aa26.96■■□□□ 1.91
UPK3A-202ENST00000396082 ANKRD30AQ9BXX3 1397 aa26.94■■□□□ 1.9
UPK3A-202ENST00000396082 PTPRKQ15262 1439 aa26.93■■□□□ 1.9
UPK3A-202ENST00000396082 ERBINQ96RT1 1412 aa26.91■■□□□ 1.9
UPK3A-202ENST00000396082 ZC3H13Q5T200 1668 aaKnown RBP26.89■■□□□ 1.9
UPK3A-202ENST00000396082 MYO3AQ8NEV4 1616 aa26.89■■□□□ 1.9
UPK3A-202ENST00000396082 PZPP20742 1482 aa26.87■■□□□ 1.89
UPK3A-202ENST00000396082 ABCC3O15438 1527 aa26.86■■□□□ 1.89
UPK3A-202ENST00000396082 MROH1Q8NDA8 1641 aa26.86■■□□□ 1.89
UPK3A-202ENST00000396082 NCOA1Q15788 1441 aa26.85■■□□□ 1.89
UPK3A-202ENST00000396082 ADGRL2O95490 1459 aa26.85■■□□□ 1.89
UPK3A-202ENST00000396082 CEP152O94986 1710 aa26.84■■□□□ 1.89
UPK3A-202ENST00000396082 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
UPK3A-202ENST00000396082 CEP170BQ9Y4F5 1589 aaPredicted RBP26.83■■□□□ 1.89
UPK3A-202ENST00000396082 PRDM15P57071 1507 aaPredicted RBP26.81■■□□□ 1.88
UPK3A-202ENST00000396082 FBXO31Q5XUX0 539 aaPredicted RBP26.81■■□□□ 1.88
UPK3A-202ENST00000396082 TNRQ92752 1358 aa26.81■■□□□ 1.88
UPK3A-202ENST00000396082 STRCQ7RTU9 1775 aa26.8■■□□□ 1.88
UPK3A-202ENST00000396082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.88
UPK3A-202ENST00000396082 CAMSAP1Q5T5Y3 1602 aa26.79■■□□□ 1.88
UPK3A-202ENST00000396082 DEPDC5O75140 1603 aa26.79■■□□□ 1.88
UPK3A-202ENST00000396082 KANK1Q14678 1352 aa26.78■■□□□ 1.88
UPK3A-202ENST00000396082 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
UPK3A-202ENST00000396082 ITGAEP38570 1179 aa26.76■■□□□ 1.87
UPK3A-202ENST00000396082 A2ML1A8K2U0 1454 aa26.75■■□□□ 1.87
UPK3A-202ENST00000396082 ANKRD50Q9ULJ7 1429 aa26.73■■□□□ 1.87
UPK3A-202ENST00000396082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
UPK3A-202ENST00000396082 CFAP65Q6ZU64 1925 aaKnown RBP26.71■■□□□ 1.87
UPK3A-202ENST00000396082 ERVK-7P63135 1459 aa26.7■■□□□ 1.87
UPK3A-202ENST00000396082 SPATA31D1Q6ZQQ2 1576 aa26.7■■□□□ 1.86
UPK3A-202ENST00000396082 NLRP1Q9C000 1473 aa26.69■■□□□ 1.86
UPK3A-202ENST00000396082 ROCK1Q13464 1354 aa26.69■■□□□ 1.86
UPK3A-202ENST00000396082 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
UPK3A-202ENST00000396082 PTPRTO14522 1441 aa26.66■■□□□ 1.86
UPK3A-202ENST00000396082 RRBP1Q9P2E9 1410 aaKnown RBP26.66■■□□□ 1.86
UPK3A-202ENST00000396082 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
UPK3A-202ENST00000396082 VWDEQ8N2E2 1590 aa26.65■■□□□ 1.86
UPK3A-202ENST00000396082 LMTK2Q8IWU2 1503 aa26.64■■□□□ 1.85
UPK3A-202ENST00000396082 NCKAP5LQ9HCH0 1330 aa26.64■■□□□ 1.85
UPK3A-202ENST00000396082 UGGT1Q9NYU2 1555 aa26.63■■□□□ 1.85
UPK3A-202ENST00000396082 PKD2Q13563 968 aa26.63■■□□□ 1.85
UPK3A-202ENST00000396082 ILDR1Q86SU0 546 aaPredicted RBP26.59■■□□□ 1.85
UPK3A-202ENST00000396082 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
UPK3A-202ENST00000396082 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
UPK3A-202ENST00000396082 UNC13BO14795 1591 aa26.58■■□□□ 1.85
UPK3A-202ENST00000396082 POLR1AO95602 1720 aaPredicted RBP26.58■■□□□ 1.85
UPK3A-202ENST00000396082 TET3O43151 1660 aa26.54■■□□□ 1.84
UPK3A-202ENST00000396082 ANKLE2Q86XL3 938 aa26.52■■□□□ 1.84
UPK3A-202ENST00000396082 CERKQ8TCT0 537 aa26.52■■□□□ 1.84
UPK3A-202ENST00000396082 UBR1Q8IWV7 1749 aa26.51■■□□□ 1.83
UPK3A-202ENST00000396082 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
UPK3A-202ENST00000396082 FBXO41Q8TF61 875 aa26.49■■□□□ 1.83
UPK3A-202ENST00000396082 RPRD2Q5VT52 1461 aaKnown RBP26.49■■□□□ 1.83
UPK3A-202ENST00000396082 PIK3C2BO00750 1634 aa26.48■■□□□ 1.83
UPK3A-202ENST00000396082 IQGAP3Q86VI3 1631 aa26.48■■□□□ 1.83
UPK3A-202ENST00000396082 STAG3Q9UJ98 1225 aa26.48■■□□□ 1.83
UPK3A-202ENST00000396082 NEURL4Q96JN8 1562 aa26.48■■□□□ 1.83
UPK3A-202ENST00000396082 NUP155O75694 1391 aa26.46■■□□□ 1.83
UPK3A-202ENST00000396082 SYNMO15061 1565 aa26.46■■□□□ 1.83
UPK3A-202ENST00000396082 NOS1P29475 1434 aa26.46■■□□□ 1.83
UPK3A-202ENST00000396082 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
UPK3A-202ENST00000396082 NPHP4O75161 1426 aaPredicted RBP26.42■■□□□ 1.82
UPK3A-202ENST00000396082 ZNF335Q9H4Z2 1342 aaPredicted RBP26.41■■□□□ 1.82
UPK3A-202ENST00000396082 E9PCH4 1651 aa26.41■■□□□ 1.82
UPK3A-202ENST00000396082 IDI1Q13907 227 aa26.41■■□□□ 1.82
UPK3A-202ENST00000396082 NAIPQ13075 1403 aa26.4■■□□□ 1.82
UPK3A-202ENST00000396082 KDM5AP29375 1690 aaKnown RBP26.4■■□□□ 1.82
UPK3A-202ENST00000396082 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
UPK3A-202ENST00000396082 MED14O60244 1454 aa26.39■■□□□ 1.82
UPK3A-202ENST00000396082 SLC52A1Q9NWF4 448 aa26.39■■□□□ 1.82
UPK3A-202ENST00000396082 SCAF11Q99590 1463 aaKnown RBP26.38■■□□□ 1.81
UPK3A-202ENST00000396082 SLIT1O75093 1534 aa26.38■■□□□ 1.81
UPK3A-202ENST00000396082 ADGRB3O60242 1522 aa26.37■■□□□ 1.81
UPK3A-202ENST00000396082 ARHGAP23Q9P227 1491 aa26.36■■□□□ 1.81
UPK3A-202ENST00000396082 EID1Q9Y6B2 187 aa26.36■■□□□ 1.81
UPK3A-202ENST00000396082 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
UPK3A-202ENST00000396082 TXNDC2Q86VQ3 553 aa26.35■■□□□ 1.81
UPK3A-202ENST00000396082 TMEM2Q9UHN6 1383 aa26.33■■□□□ 1.81
UPK3A-202ENST00000396082 LTKP29376 864 aa26.31■■□□□ 1.8
UPK3A-202ENST00000396082 IQSEC2Q5JU85 1478 aa26.3■■□□□ 1.8
UPK3A-202ENST00000396082 TRIM52Q96A61 297 aa26.29■■□□□ 1.8
UPK3A-202ENST00000396082 MYO5BQ9ULV0 1848 aa26.28■■□□□ 1.8
UPK3A-202ENST00000396082 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
UPK3A-202ENST00000396082 SPHKAPQ2M3C7 1700 aa26.26■■□□□ 1.79
UPK3A-202ENST00000396082 CPS1P31327 1500 aa26.26■■□□□ 1.79
UPK3A-202ENST00000396082 TMEM131LA2VDJ0 1609 aa26.25■■□□□ 1.79
UPK3A-202ENST00000396082 PPP1R15AO75807 674 aaPredicted RBP26.19■■□□□ 1.78
UPK3A-202ENST00000396082 HDGFP51858 240 aaKnown RBP26.19■■□□□ 1.78
UPK3A-202ENST00000396082 BCANQ96GW7 911 aa26.19■■□□□ 1.78
UPK3A-202ENST00000396082 RIMS2Q9UQ26 1411 aa26.19■■□□□ 1.78
UPK3A-202ENST00000396082 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
UPK3A-202ENST00000396082 ZFYVE9O95405 1425 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms