RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
GTF2A2-202ENST00000396060 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
GTF2A2-202ENST00000396060 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
GTF2A2-202ENST00000396060 ATP10AO60312 1499 aa17.11■□□□□ 0.33
GTF2A2-202ENST00000396060 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
GTF2A2-202ENST00000396060 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
GTF2A2-202ENST00000396060 A2MP01023 1474 aa17.1■□□□□ 0.33
GTF2A2-202ENST00000396060 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
GTF2A2-202ENST00000396060 BCORL1Q5H9F3 1711 aa17.09■□□□□ 0.33
GTF2A2-202ENST00000396060 ZMYM4Q5VZL5 1548 aa17.08■□□□□ 0.32
GTF2A2-202ENST00000396060 RAPGEF3O95398 923 aa17.07■□□□□ 0.32
GTF2A2-202ENST00000396060 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
GTF2A2-202ENST00000396060 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
GTF2A2-202ENST00000396060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
GTF2A2-202ENST00000396060 MYT1LQ9UL68 1186 aa17.06■□□□□ 0.32
GTF2A2-202ENST00000396060 KANK1Q14678 1352 aa17.05■□□□□ 0.32
GTF2A2-202ENST00000396060 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
GTF2A2-202ENST00000396060 KIF3BO15066 747 aa17.05■□□□□ 0.32
GTF2A2-202ENST00000396060 RNF17Q9BXT8 1623 aaKnown RBP17.05■□□□□ 0.32
GTF2A2-202ENST00000396060 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
GTF2A2-202ENST00000396060 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
GTF2A2-202ENST00000396060 MROH1Q8NDA8 1641 aa17.04■□□□□ 0.32
GTF2A2-202ENST00000396060 LMTK2Q8IWU2 1503 aa17.04■□□□□ 0.32
GTF2A2-202ENST00000396060 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
GTF2A2-202ENST00000396060 TET3O43151 1660 aa17.02■□□□□ 0.32
GTF2A2-202ENST00000396060 PTPRTO14522 1441 aa17.01■□□□□ 0.31
GTF2A2-202ENST00000396060 TSPOAP1O95153 1857 aa17.01■□□□□ 0.31
GTF2A2-202ENST00000396060 CCDC144AA2RUR9 1427 aa16.99■□□□□ 0.31
GTF2A2-202ENST00000396060 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
GTF2A2-202ENST00000396060 E9PCH4 1651 aa16.98■□□□□ 0.31
GTF2A2-202ENST00000396060 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
GTF2A2-202ENST00000396060 UHRF1BP1Q6BDS2 1440 aa16.96■□□□□ 0.31
GTF2A2-202ENST00000396060 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
GTF2A2-202ENST00000396060 DIEXFQ68CQ4 756 aaKnown RBP16.95■□□□□ 0.3
GTF2A2-202ENST00000396060 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
GTF2A2-202ENST00000396060 TRPM2O94759 1503 aa16.94■□□□□ 0.3
GTF2A2-202ENST00000396060 AGLP35573 1532 aa16.93■□□□□ 0.3
GTF2A2-202ENST00000396060 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
GTF2A2-202ENST00000396060 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
GTF2A2-202ENST00000396060 NEURL4Q96JN8 1562 aa16.92■□□□□ 0.3
GTF2A2-202ENST00000396060 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
GTF2A2-202ENST00000396060 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
GTF2A2-202ENST00000396060 STAC3Q96MF2 364 aa16.9■□□□□ 0.3
GTF2A2-202ENST00000396060 ABCC3O15438 1527 aa16.9■□□□□ 0.3
GTF2A2-202ENST00000396060 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
GTF2A2-202ENST00000396060 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
GTF2A2-202ENST00000396060 GGT6Q6P531 493 aa16.88■□□□□ 0.29
GTF2A2-202ENST00000396060 ZC3H13Q5T200 1668 aaKnown RBP16.87■□□□□ 0.29
GTF2A2-202ENST00000396060 WASHC2CQ9Y4E1 1318 aa16.86■□□□□ 0.29
GTF2A2-202ENST00000396060 CEP152O94986 1710 aa16.86■□□□□ 0.29
GTF2A2-202ENST00000396060 NPATQ14207 1427 aa16.85■□□□□ 0.29
GTF2A2-202ENST00000396060 ARHGEF40Q8TER5 1519 aa16.85■□□□□ 0.29
GTF2A2-202ENST00000396060 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
GTF2A2-202ENST00000396060 RALGAPBQ86X10 1494 aa16.84■□□□□ 0.29
GTF2A2-202ENST00000396060 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
GTF2A2-202ENST00000396060 DCAF11Q8TEB1 546 aa16.84■□□□□ 0.29
GTF2A2-202ENST00000396060 CLTCL1P53675 1640 aa16.83■□□□□ 0.29
GTF2A2-202ENST00000396060 NOS1P29475 1434 aa16.83■□□□□ 0.28
GTF2A2-202ENST00000396060 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
GTF2A2-202ENST00000396060 PRAG1Q86YV5 1406 aa16.82■□□□□ 0.28
GTF2A2-202ENST00000396060 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
GTF2A2-202ENST00000396060 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
GTF2A2-202ENST00000396060 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
GTF2A2-202ENST00000396060 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
GTF2A2-202ENST00000396060 KIF1BO60333 1816 aa16.75■□□□□ 0.27
GTF2A2-202ENST00000396060 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
GTF2A2-202ENST00000396060 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
GTF2A2-202ENST00000396060 SIGLEC1Q9BZZ2 1709 aa16.74■□□□□ 0.27
GTF2A2-202ENST00000396060 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
GTF2A2-202ENST00000396060 LAMC1P11047 1609 aa16.74■□□□□ 0.27
GTF2A2-202ENST00000396060 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
GTF2A2-202ENST00000396060 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
GTF2A2-202ENST00000396060 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
GTF2A2-202ENST00000396060 ZNF326Q5BKZ1 582 aaKnown RBP16.72■□□□□ 0.27
GTF2A2-202ENST00000396060 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
GTF2A2-202ENST00000396060 MYOM2P54296 1465 aa16.72■□□□□ 0.27
GTF2A2-202ENST00000396060 UGGT1Q9NYU2 1555 aa16.72■□□□□ 0.27
GTF2A2-202ENST00000396060 USP47Q96K76 1375 aa16.72■□□□□ 0.27
GTF2A2-202ENST00000396060 SYNMO15061 1565 aa16.71■□□□□ 0.27
GTF2A2-202ENST00000396060 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
GTF2A2-202ENST00000396060 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
GTF2A2-202ENST00000396060 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
GTF2A2-202ENST00000396060 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
GTF2A2-202ENST00000396060 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
GTF2A2-202ENST00000396060 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
GTF2A2-202ENST00000396060 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
GTF2A2-202ENST00000396060 IFT172Q9UG01 1749 aa16.68■□□□□ 0.26
GTF2A2-202ENST00000396060 KIAA1210Q9ULL0 1709 aa16.68■□□□□ 0.26
GTF2A2-202ENST00000396060 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
GTF2A2-202ENST00000396060 MIER1Q8N108 512 aa16.68■□□□□ 0.26
GTF2A2-202ENST00000396060 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
GTF2A2-202ENST00000396060 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
GTF2A2-202ENST00000396060 IDI1Q13907 227 aa16.66■□□□□ 0.26
GTF2A2-202ENST00000396060 NBPF1Q3BBV0 1214 aa16.66■□□□□ 0.26
GTF2A2-202ENST00000396060 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
GTF2A2-202ENST00000396060 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
GTF2A2-202ENST00000396060 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
GTF2A2-202ENST00000396060 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
GTF2A2-202ENST00000396060 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
GTF2A2-202ENST00000396060 ZFYVE9O95405 1425 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms