RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 UNC13BO14795 1591 aa20.01■□□□□ 0.79
VAPB-202ENST00000395802 KIF3BO15066 747 aa20.01■□□□□ 0.79
VAPB-202ENST00000395802 KANK1Q14678 1352 aa20■□□□□ 0.79
VAPB-202ENST00000395802 ATP10AO60312 1499 aa20■□□□□ 0.79
VAPB-202ENST00000395802 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
VAPB-202ENST00000395802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.792e-8■□□□□ 8.9
VAPB-202ENST00000395802 REREQ9P2R6 1566 aa19.97■□□□□ 0.79
VAPB-202ENST00000395802 PZPP20742 1482 aa19.96■□□□□ 0.79
VAPB-202ENST00000395802 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
VAPB-202ENST00000395802 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
VAPB-202ENST00000395802 FAM135AQ9P2D6 1515 aa19.95■□□□□ 0.78
VAPB-202ENST00000395802 ARHGEF40Q8TER5 1519 aa19.95■□□□□ 0.78
VAPB-202ENST00000395802 IQGAP3Q86VI3 1631 aa19.94■□□□□ 0.78
VAPB-202ENST00000395802 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
VAPB-202ENST00000395802 RNF17Q9BXT8 1623 aaKnown RBP19.92■□□□□ 0.78
VAPB-202ENST00000395802 PKD2Q13563 968 aa19.92■□□□□ 0.78
VAPB-202ENST00000395802 AGLP35573 1532 aa19.91■□□□□ 0.78
VAPB-202ENST00000395802 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
VAPB-202ENST00000395802 GGT6Q6P531 493 aa19.89■□□□□ 0.77
VAPB-202ENST00000395802 TIMELESSQ9UNS1 1208 aa19.88■□□□□ 0.77
VAPB-202ENST00000395802 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
VAPB-202ENST00000395802 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
VAPB-202ENST00000395802 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
VAPB-202ENST00000395802 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
VAPB-202ENST00000395802 LMTK2Q8IWU2 1503 aa19.85■□□□□ 0.77
VAPB-202ENST00000395802 TET3O43151 1660 aa19.83■□□□□ 0.77
VAPB-202ENST00000395802 FOXD1Q16676 465 aa19.83■□□□□ 0.76
VAPB-202ENST00000395802 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
VAPB-202ENST00000395802 ZC3H13Q5T200 1668 aaKnown RBP19.81■□□□□ 0.76
VAPB-202ENST00000395802 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
VAPB-202ENST00000395802 ARID4BQ4LE39 1312 aaPredicted RBP19.8■□□□□ 0.76
VAPB-202ENST00000395802 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
VAPB-202ENST00000395802 ESF1Q9H501 851 aaKnown RBP19.79■□□□□ 0.76
VAPB-202ENST00000395802 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
VAPB-202ENST00000395802 ABCC3O15438 1527 aa19.78■□□□□ 0.76
VAPB-202ENST00000395802 EFCAB6Q5THR3 1501 aa19.77■□□□□ 0.76
VAPB-202ENST00000395802 CCDC144AA2RUR9 1427 aa19.75■□□□□ 0.75
VAPB-202ENST00000395802 E9PCH4 1651 aa19.75■□□□□ 0.75
VAPB-202ENST00000395802 ARHGAP31Q2M1Z3 1444 aa19.74■□□□□ 0.75
VAPB-202ENST00000395802 CEP152O94986 1710 aa19.74■□□□□ 0.75
VAPB-202ENST00000395802 PTPRTO14522 1441 aa19.72■□□□□ 0.75
VAPB-202ENST00000395802 MLECQ14165 292 aa19.72■□□□□ 0.75
VAPB-202ENST00000395802 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
VAPB-202ENST00000395802 CNTLNQ9NXG0 1405 aa19.7■□□□□ 0.74
VAPB-202ENST00000395802 NPATQ14207 1427 aa19.7■□□□□ 0.74
VAPB-202ENST00000395802 TRPM2O94759 1503 aa19.7■□□□□ 0.74
VAPB-202ENST00000395802 SIGLEC1Q9BZZ2 1709 aa19.69■□□□□ 0.74
VAPB-202ENST00000395802 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
VAPB-202ENST00000395802 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
VAPB-202ENST00000395802 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
VAPB-202ENST00000395802 NOS1P29475 1434 aa19.62■□□□□ 0.73
VAPB-202ENST00000395802 PPP1R15AO75807 674 aaPredicted RBP19.62■□□□□ 0.73
VAPB-202ENST00000395802 SLC52A1Q9NWF4 448 aa19.62■□□□□ 0.73
VAPB-202ENST00000395802 ZMYM3Q14202 1370 aa19.62■□□□□ 0.73
VAPB-202ENST00000395802 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
VAPB-202ENST00000395802 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
VAPB-202ENST00000395802 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
VAPB-202ENST00000395802 NEURL4Q96JN8 1562 aa19.59■□□□□ 0.73
VAPB-202ENST00000395802 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
VAPB-202ENST00000395802 PREX1Q8TCU6 1659 aa19.56■□□□□ 0.72
VAPB-202ENST00000395802 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
VAPB-202ENST00000395802 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
VAPB-202ENST00000395802 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
VAPB-202ENST00000395802 SPATA31E1Q6ZUB1 1445 aa19.54■□□□□ 0.72
VAPB-202ENST00000395802 SPATA31D1Q6ZQQ2 1576 aa19.54■□□□□ 0.72
VAPB-202ENST00000395802 KIF1BO60333 1816 aa19.54■□□□□ 0.72
VAPB-202ENST00000395802 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
VAPB-202ENST00000395802 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
VAPB-202ENST00000395802 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
VAPB-202ENST00000395802 FBXO31Q5XUX0 539 aaPredicted RBP19.51■□□□□ 0.71
VAPB-202ENST00000395802 SYNMO15061 1565 aa19.51■□□□□ 0.71
VAPB-202ENST00000395802 RPGRIP1LQ68CZ1 1315 aa19.5■□□□□ 0.71
VAPB-202ENST00000395802 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
VAPB-202ENST00000395802 CHGAP10645 457 aaKnown RBP19.49■□□□□ 0.71
VAPB-202ENST00000395802 IDI1Q13907 227 aa19.49■□□□□ 0.71
VAPB-202ENST00000395802 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
VAPB-202ENST00000395802 ADGRB3O60242 1522 aa19.47■□□□□ 0.71
VAPB-202ENST00000395802 TNRQ92752 1358 aa19.47■□□□□ 0.71
VAPB-202ENST00000395802 UHRF1BP1Q6BDS2 1440 aa19.47■□□□□ 0.71
VAPB-202ENST00000395802 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
VAPB-202ENST00000395802 KDM2AQ9Y2K7 1162 aa19.46■□□□□ 0.71
VAPB-202ENST00000395802 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
VAPB-202ENST00000395802 MADDQ8WXG6 1647 aa19.45■□□□□ 0.7
VAPB-202ENST00000395802 C3P01024 1663 aa19.44■□□□□ 0.7
VAPB-202ENST00000395802 NLRP1Q9C000 1473 aa19.43■□□□□ 0.7
VAPB-202ENST00000395802 RIMS1Q86UR5 1692 aaKnown RBP19.41■□□□□ 0.7
VAPB-202ENST00000395802 MYOM2P54296 1465 aa19.4■□□□□ 0.7
VAPB-202ENST00000395802 PRAG1Q86YV5 1406 aa19.4■□□□□ 0.7
VAPB-202ENST00000395802 VGFO15240 615 aaPredicted RBP19.4■□□□□ 0.7
VAPB-202ENST00000395802 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
VAPB-202ENST00000395802 HDGFP51858 240 aaKnown RBP19.4■□□□□ 0.7
VAPB-202ENST00000395802 TMEM131LA2VDJ0 1609 aa19.39■□□□□ 0.7
VAPB-202ENST00000395802 KDM5AP29375 1690 aaKnown RBP19.39■□□□□ 0.69
VAPB-202ENST00000395802 NBPF8Q3BBV2 869 aa19.39■□□□□ 0.69
VAPB-202ENST00000395802 RALGAPBQ86X10 1494 aa19.36■□□□□ 0.69
VAPB-202ENST00000395802 ZFYVE9O95405 1425 aa19.35■□□□□ 0.69
VAPB-202ENST00000395802 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
VAPB-202ENST00000395802 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
VAPB-202ENST00000395802 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
VAPB-202ENST00000395802 A2ML1A8K2U0 1454 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms