RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 PLEKHH2Q8IVE3 1493 aa30.07■■■□□ 2.4
RARA-202ENST00000394081 ADCY10Q96PN6 1610 aa30.07■■■□□ 2.4
RARA-202ENST00000394081 ANKRD50Q9ULJ7 1429 aa30.04■■■□□ 2.4
RARA-202ENST00000394081 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
RARA-202ENST00000394081 BLMP54132 1417 aaPredicted RBP30.02■■■□□ 2.4
RARA-202ENST00000394081 DISP1Q96F81 1524 aa30.02■■■□□ 2.4
RARA-202ENST00000394081 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.39
RARA-202ENST00000394081 GPATCH8Q9UKJ3 1502 aaKnown RBP30.01■■■□□ 2.39
RARA-202ENST00000394081 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.39
RARA-202ENST00000394081 SHANK2Q9UPX8 1470 aa30.01■■■□□ 2.39
RARA-202ENST00000394081 GSE1Q14687 1217 aa30.01■■■□□ 2.39
RARA-202ENST00000394081 CFDP1Q9UEE9 299 aaPredicted RBP30.01■■■□□ 2.39
RARA-202ENST00000394081 SENP3-EIF4A1A0A087X0R7 540 aa29.96■■■□□ 2.39
RARA-202ENST00000394081 ARID3CA6NKF2 412 aa29.96■■■□□ 2.39
RARA-202ENST00000394081 PTPRGP23470 1445 aa29.92■■■□□ 2.38
RARA-202ENST00000394081 NFKBIBQ15653 356 aa29.91■■■□□ 2.38
RARA-202ENST00000394081 RTN4Q9NQC3 1192 aaKnown RBP29.9■■■□□ 2.38
RARA-202ENST00000394081 NUP155O75694 1391 aa29.9■■■□□ 2.38
RARA-202ENST00000394081 PRG4Q92954 1404 aaPredicted RBP29.9■■■□□ 2.38
RARA-202ENST00000394081 KDM2BQ8NHM5 1336 aa29.89■■■□□ 2.38
RARA-202ENST00000394081 LAMC1P11047 1609 aa29.89■■■□□ 2.38
RARA-202ENST00000394081 TRPM1Q7Z4N2 1603 aa29.89■■■□□ 2.38
RARA-202ENST00000394081 PER1O15534 1290 aaPredicted RBP29.89■■■□□ 2.38
RARA-202ENST00000394081 CRBNQ96SW2 442 aa29.88■■■□□ 2.37
RARA-202ENST00000394081 DNAJC5Q9H3Z4 198 aa29.88■■■□□ 2.37
RARA-202ENST00000394081 CENPQQ7L2Z9 268 aaPredicted RBP29.87■■■□□ 2.37
RARA-202ENST00000394081 CDCA7LQ96GN5 454 aa29.87■■■□□ 2.37
RARA-202ENST00000394081 ZNF608Q9ULD9 1512 aaPredicted RBP29.85■■■□□ 2.37
RARA-202ENST00000394081 GPRASP1Q5JY77 1395 aa29.85■■■□□ 2.37
RARA-202ENST00000394081 DAXXQ9UER7 740 aaPredicted RBP29.84■■■□□ 2.37
RARA-202ENST00000394081 COL17A1Q9UMD9 1497 aaPredicted RBP29.84■■■□□ 2.37
RARA-202ENST00000394081 CDC42BPAQ5VT25 1732 aa29.82■■■□□ 2.36
RARA-202ENST00000394081 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
RARA-202ENST00000394081 C9orf84Q5VXU9 1444 aa29.81■■■□□ 2.36
RARA-202ENST00000394081 DCAF11Q8TEB1 546 aa29.8■■■□□ 2.36
RARA-202ENST00000394081 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
RARA-202ENST00000394081 FAM161AQ3B820 660 aa29.8■■■□□ 2.36
RARA-202ENST00000394081 PLIN1O60240 522 aa29.79■■■□□ 2.36
RARA-202ENST00000394081 BRPF3Q9ULD4 1205 aa29.78■■■□□ 2.36
RARA-202ENST00000394081 KDM2AQ9Y2K7 1162 aa29.76■■■□□ 2.36
RARA-202ENST00000394081 PRDM15P57071 1507 aaPredicted RBP29.75■■■□□ 2.35
RARA-202ENST00000394081 FRAT1Q92837 279 aaPredicted RBP29.75■■■□□ 2.35
RARA-202ENST00000394081 ZNF777Q9ULD5 760 aaPredicted RBP29.72■■■□□ 2.35
RARA-202ENST00000394081 ARHGEF5Q12774 1597 aa29.72■■■□□ 2.35
RARA-202ENST00000394081 C8orf34Q49A92 452 aa29.71■■■□□ 2.35
RARA-202ENST00000394081 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.69■■■□□ 2.34
RARA-202ENST00000394081 EIF2AK4Q9P2K8 1649 aaKnown RBP29.69■■■□□ 2.34
RARA-202ENST00000394081 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
RARA-202ENST00000394081 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
RARA-202ENST00000394081 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
RARA-202ENST00000394081 FAM135AQ9P2D6 1515 aa29.66■■■□□ 2.34
RARA-202ENST00000394081 IFT140Q96RY7 1462 aa29.65■■■□□ 2.34
RARA-202ENST00000394081 UBE2Q2Q8WVN8 375 aa29.65■■■□□ 2.34
RARA-202ENST00000394081 TSPY4P0CV99 314 aa29.65■■■□□ 2.34
RARA-202ENST00000394081 TSPY10P0CW01 314 aa29.65■■■□□ 2.34
RARA-202ENST00000394081 EIF3AQ14152 1382 aaKnown RBP29.64■■■□□ 2.34
RARA-202ENST00000394081 C20orf194Q5TEA3 1177 aa29.64■■■□□ 2.34
RARA-202ENST00000394081 TESK2Q96S53 571 aa29.64■■■□□ 2.34
RARA-202ENST00000394081 CCDC144AA2RUR9 1427 aa29.64■■■□□ 2.34
RARA-202ENST00000394081 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
RARA-202ENST00000394081 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
RARA-202ENST00000394081 NUP160Q12769 1436 aa29.63■■■□□ 2.33
RARA-202ENST00000394081 SKAP1Q86WV1 359 aa29.63■■■□□ 2.33
RARA-202ENST00000394081 FAM43AQ8N2R8 423 aa29.63■■■□□ 2.33
RARA-202ENST00000394081 ERBINQ96RT1 1412 aa29.63■■■□□ 2.33
RARA-202ENST00000394081 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.63■■■□□ 2.33
RARA-202ENST00000394081 DUSP27Q5VZP5 1158 aa29.62■■■□□ 2.33
RARA-202ENST00000394081 ZNF521Q96K83 1311 aa29.61■■■□□ 2.33
RARA-202ENST00000394081 DISP3Q9P2K9 1392 aa29.61■■■□□ 2.33
RARA-202ENST00000394081 VIRMAQ69YN4 1812 aaKnown RBP29.6■■■□□ 2.33
RARA-202ENST00000394081 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
RARA-202ENST00000394081 CC2D1BQ5T0F9 858 aaKnown RBP29.6■■■□□ 2.33
RARA-202ENST00000394081 PANK3Q9H999 370 aa29.59■■■□□ 2.33
RARA-202ENST00000394081 RSPH6AQ9H0K4 717 aa29.58■■■□□ 2.33
RARA-202ENST00000394081 SYNJ2O15056 1496 aa29.58■■■□□ 2.33
RARA-202ENST00000394081 TMF1P82094 1093 aa29.57■■■□□ 2.32
RARA-202ENST00000394081 A2MP01023 1474 aa29.57■■■□□ 2.32
RARA-202ENST00000394081 MAGI1Q96QZ7 1491 aaPredicted RBP29.56■■■□□ 2.32
RARA-202ENST00000394081 CCDC141Q6ZP82 1450 aa29.56■■■□□ 2.32
RARA-202ENST00000394081 ADAMTS8Q9UP79 889 aa29.55■■■□□ 2.32
RARA-202ENST00000394081 FRAT2O75474 233 aaPredicted RBP29.54■■■□□ 2.32
RARA-202ENST00000394081 GOLGA2Q08379 1002 aa29.54■■■□□ 2.32
RARA-202ENST00000394081 PLEKHH1Q9ULM0 1364 aa29.54■■■□□ 2.32
RARA-202ENST00000394081 UNC13BO14795 1591 aa29.53■■■□□ 2.32
RARA-202ENST00000394081 NBPF1Q3BBV0 1214 aa29.53■■■□□ 2.32
RARA-202ENST00000394081 CARMIL2Q6F5E8 1435 aa29.53■■■□□ 2.32
RARA-202ENST00000394081 ABCA8O94911 1581 aa29.52■■■□□ 2.32
RARA-202ENST00000394081 PLEKHD1A6NEE1 506 aa29.51■■■□□ 2.32
RARA-202ENST00000394081 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
RARA-202ENST00000394081 RSPH4AQ5TD94 716 aa29.5■■■□□ 2.31
RARA-202ENST00000394081 MYO5CQ9NQX4 1742 aa29.49■■■□□ 2.31
RARA-202ENST00000394081 WDR43Q15061 677 aaKnown RBP eCLIP29.49■■■□□ 2.31
RARA-202ENST00000394081 TRMT2AQ8IZ69 625 aaKnown RBP29.48■■■□□ 2.31
RARA-202ENST00000394081 PLA2R1Q13018 1463 aa29.48■■■□□ 2.31
RARA-202ENST00000394081 PIK3C2GO75747 1445 aa29.47■■■□□ 2.31
RARA-202ENST00000394081 ATP10AO60312 1499 aa29.47■■■□□ 2.31
RARA-202ENST00000394081 SLFN5Q08AF3 891 aa29.47■■■□□ 2.31
RARA-202ENST00000394081 WDR7Q9Y4E6 1490 aa29.45■■■□□ 2.31
RARA-202ENST00000394081 PPP2R1AP30153 589 aa29.44■■■□□ 2.3
RARA-202ENST00000394081 MAST1Q9Y2H9 1570 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms