RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 PTPRKQ15262 1439 aa27.53■■■□□ 2
CDKN1C-201ENST00000380725 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
CDKN1C-201ENST00000380725 RRP7BPQ9NSQ0 103 aa27.53■■■□□ 2
CDKN1C-201ENST00000380725 SHANK2Q9UPX8 1470 aa27.52■■■□□ 2
CDKN1C-201ENST00000380725 CHIC2Q9UKJ5 165 aa27.51■■□□□ 1.99
CDKN1C-201ENST00000380725 DUOX2Q9NRD8 1548 aa27.51■■□□□ 1.99
CDKN1C-201ENST00000380725 ILDR1Q86SU0 546 aaPredicted RBP27.49■■□□□ 1.99
CDKN1C-201ENST00000380725 KDM5DQ9BY66 1539 aa27.49■■□□□ 1.99
CDKN1C-201ENST00000380725 KIF15Q9NS87 1388 aa27.48■■□□□ 1.99
CDKN1C-201ENST00000380725 FAM135AQ9P2D6 1515 aa27.48■■□□□ 1.99
CDKN1C-201ENST00000380725 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
CDKN1C-201ENST00000380725 EIF2AK4Q9P2K8 1649 aaKnown RBP27.48■■□□□ 1.99
CDKN1C-201ENST00000380725 STRCQ7RTU9 1775 aa27.48■■□□□ 1.99
CDKN1C-201ENST00000380725 RNF17Q9BXT8 1623 aaKnown RBP27.46■■□□□ 1.99
CDKN1C-201ENST00000380725 FBXO31Q5XUX0 539 aaPredicted RBP27.46■■□□□ 1.99
CDKN1C-201ENST00000380725 DMRT2Q9Y5R5 561 aa27.46■■□□□ 1.99
CDKN1C-201ENST00000380725 ANKRD30AQ9BXX3 1397 aa27.45■■□□□ 1.98
CDKN1C-201ENST00000380725 MYO3AQ8NEV4 1616 aa27.41■■□□□ 1.98
CDKN1C-201ENST00000380725 PZPP20742 1482 aa27.4■■□□□ 1.98
CDKN1C-201ENST00000380725 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
CDKN1C-201ENST00000380725 ERBINQ96RT1 1412 aa27.4■■□□□ 1.98
CDKN1C-201ENST00000380725 MROH1Q8NDA8 1641 aa27.38■■□□□ 1.97
CDKN1C-201ENST00000380725 CFAP65Q6ZU64 1925 aaKnown RBP27.37■■□□□ 1.97
CDKN1C-201ENST00000380725 TNRQ92752 1358 aa27.37■■□□□ 1.97
CDKN1C-201ENST00000380725 ABCC3O15438 1527 aa27.37■■□□□ 1.97
CDKN1C-201ENST00000380725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.37■■□□□ 1.97
CDKN1C-201ENST00000380725 CAMSAP1Q5T5Y3 1602 aa27.37■■□□□ 1.97
CDKN1C-201ENST00000380725 ZNF142P52746 1687 aaPredicted RBP27.36■■□□□ 1.97
CDKN1C-201ENST00000380725 ZC3H13Q5T200 1668 aaKnown RBP27.36■■□□□ 1.97
CDKN1C-201ENST00000380725 CEP170BQ9Y4F5 1589 aaPredicted RBP27.36■■□□□ 1.97
CDKN1C-201ENST00000380725 CEP152O94986 1710 aa27.34■■□□□ 1.97
CDKN1C-201ENST00000380725 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.97
CDKN1C-201ENST00000380725 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
CDKN1C-201ENST00000380725 NCKAP5LQ9HCH0 1330 aa27.32■■□□□ 1.96
CDKN1C-201ENST00000380725 PTPRTO14522 1441 aa27.32■■□□□ 1.96
CDKN1C-201ENST00000380725 KANK1Q14678 1352 aa27.29■■□□□ 1.96
CDKN1C-201ENST00000380725 PRDM15P57071 1507 aaPredicted RBP27.28■■□□□ 1.96
CDKN1C-201ENST00000380725 PKD2Q13563 968 aa27.28■■□□□ 1.96
CDKN1C-201ENST00000380725 DEPDC5O75140 1603 aa27.27■■□□□ 1.96
CDKN1C-201ENST00000380725 ITGAEP38570 1179 aa27.26■■□□□ 1.95
CDKN1C-201ENST00000380725 CERKQ8TCT0 537 aa27.26■■□□□ 1.95
CDKN1C-201ENST00000380725 FBXO41Q8TF61 875 aa27.26■■□□□ 1.95
CDKN1C-201ENST00000380725 PLA2R1Q13018 1463 aa27.25■■□□□ 1.95
CDKN1C-201ENST00000380725 THEMISQ8N1K5 641 aaPredicted RBP27.24■■□□□ 1.95
CDKN1C-201ENST00000380725 NLRP1Q9C000 1473 aa27.24■■□□□ 1.95
CDKN1C-201ENST00000380725 SPATA31D1Q6ZQQ2 1576 aa27.23■■□□□ 1.95
CDKN1C-201ENST00000380725 ANKRD50Q9ULJ7 1429 aa27.23■■□□□ 1.95
CDKN1C-201ENST00000380725 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
CDKN1C-201ENST00000380725 ARHGAP31Q2M1Z3 1444 aa27.22■■□□□ 1.95
CDKN1C-201ENST00000380725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.95
CDKN1C-201ENST00000380725 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
CDKN1C-201ENST00000380725 UGGT1Q9NYU2 1555 aa27.18■■□□□ 1.94
CDKN1C-201ENST00000380725 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
CDKN1C-201ENST00000380725 ANKLE2Q86XL3 938 aa27.16■■□□□ 1.94
CDKN1C-201ENST00000380725 LMTK2Q8IWU2 1503 aa27.15■■□□□ 1.94
CDKN1C-201ENST00000380725 POLR1AO95602 1720 aaPredicted RBP27.11■■□□□ 1.93
CDKN1C-201ENST00000380725 RRBP1Q9P2E9 1410 aaKnown RBP27.1■■□□□ 1.93
CDKN1C-201ENST00000380725 LTBP4Q8N2S1 1624 aa27.08■■□□□ 1.93
CDKN1C-201ENST00000380725 ZNF335Q9H4Z2 1342 aaPredicted RBP27.07■■□□□ 1.92
CDKN1C-201ENST00000380725 UBR1Q8IWV7 1749 aa27.06■■□□□ 1.92
CDKN1C-201ENST00000380725 EFCAB6Q5THR3 1501 aa27.05■■□□□ 1.92
CDKN1C-201ENST00000380725 IDI1Q13907 227 aa27.04■■□□□ 1.92
CDKN1C-201ENST00000380725 STAG3Q9UJ98 1225 aa27.04■■□□□ 1.92
CDKN1C-201ENST00000380725 NEURL4Q96JN8 1562 aa27.04■■□□□ 1.92
CDKN1C-201ENST00000380725 UNC13BO14795 1591 aa27.03■■□□□ 1.92
CDKN1C-201ENST00000380725 TET3O43151 1660 aa27.01■■□□□ 1.91
CDKN1C-201ENST00000380725 NOS1P29475 1434 aa27■■□□□ 1.91
CDKN1C-201ENST00000380725 PIK3C2BO00750 1634 aa27■■□□□ 1.91
CDKN1C-201ENST00000380725 NPHP4O75161 1426 aaPredicted RBP26.99■■□□□ 1.91
CDKN1C-201ENST00000380725 MED14O60244 1454 aa26.99■■□□□ 1.91
CDKN1C-201ENST00000380725 NUP155O75694 1391 aa26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 SYNMO15061 1565 aa26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 TXNDC2Q86VQ3 553 aa26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 SLC52A1Q9NWF4 448 aa26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 RPRD2Q5VT52 1461 aaKnown RBP26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
CDKN1C-201ENST00000380725 LTKP29376 864 aa26.95■■□□□ 1.9
CDKN1C-201ENST00000380725 EID1Q9Y6B2 187 aa26.95■■□□□ 1.9
CDKN1C-201ENST00000380725 IQGAP1P46940 1657 aa26.94■■□□□ 1.9
CDKN1C-201ENST00000380725 IQGAP3Q86VI3 1631 aa26.94■■□□□ 1.9
CDKN1C-201ENST00000380725 ARHGAP23Q9P227 1491 aa26.93■■□□□ 1.9
CDKN1C-201ENST00000380725 SLIT1O75093 1534 aa26.93■■□□□ 1.9
CDKN1C-201ENST00000380725 IQSEC2Q5JU85 1478 aa26.92■■□□□ 1.9
CDKN1C-201ENST00000380725 SCAF11Q99590 1463 aaKnown RBP26.92■■□□□ 1.9
CDKN1C-201ENST00000380725 KDM5AP29375 1690 aaKnown RBP26.92■■□□□ 1.9
CDKN1C-201ENST00000380725 TMEM2Q9UHN6 1383 aa26.91■■□□□ 1.9
CDKN1C-201ENST00000380725 E9PCH4 1651 aa26.91■■□□□ 1.9
CDKN1C-201ENST00000380725 NAIPQ13075 1403 aa26.88■■□□□ 1.89
CDKN1C-201ENST00000380725 ADGRB3O60242 1522 aa26.85■■□□□ 1.89
CDKN1C-201ENST00000380725 CHGAP10645 457 aaKnown RBP26.83■■□□□ 1.89
CDKN1C-201ENST00000380725 CPS1P31327 1500 aa26.83■■□□□ 1.89
CDKN1C-201ENST00000380725 MYO5BQ9ULV0 1848 aa26.83■■□□□ 1.89
CDKN1C-201ENST00000380725 UBAP1LF5GYI3 381 aa26.81■■□□□ 1.88
CDKN1C-201ENST00000380725 HFM1A2PYH4 1435 aa26.8■■□□□ 1.88
CDKN1C-201ENST00000380725 TRIM52Q96A61 297 aa26.79■■□□□ 1.88
CDKN1C-201ENST00000380725 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
CDKN1C-201ENST00000380725 TMEM131LA2VDJ0 1609 aa26.78■■□□□ 1.88
CDKN1C-201ENST00000380725 STRCP1A6NGW2 1772 aa26.76■■□□□ 1.88
CDKN1C-201ENST00000380725 BCANQ96GW7 911 aa26.76■■□□□ 1.87
CDKN1C-201ENST00000380725 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms