RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 NCBP3Q53F19 620 aaKnown RBP19.76■□□□□ 0.75
TNFSF13-203ENST00000380535 DIP2BQ9P265 1576 aa19.76■□□□□ 0.75
TNFSF13-203ENST00000380535 DEPDC5O75140 1603 aa19.75■□□□□ 0.75
TNFSF13-203ENST00000380535 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
TNFSF13-203ENST00000380535 PKD2Q13563 968 aa19.75■□□□□ 0.75
TNFSF13-203ENST00000380535 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
TNFSF13-203ENST00000380535 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
TNFSF13-203ENST00000380535 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
TNFSF13-203ENST00000380535 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
TNFSF13-203ENST00000380535 TEX14Q8IWB6 1497 aa19.71■□□□□ 0.75
TNFSF13-203ENST00000380535 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
TNFSF13-203ENST00000380535 BCORL1Q5H9F3 1711 aa19.68■□□□□ 0.74
TNFSF13-203ENST00000380535 KANK1Q14678 1352 aa19.68■□□□□ 0.74
TNFSF13-203ENST00000380535 ATP10AO60312 1499 aa19.67■□□□□ 0.74
TNFSF13-203ENST00000380535 FOXD1Q16676 465 aa19.67■□□□□ 0.74
TNFSF13-203ENST00000380535 RICTORQ6R327 1708 aa19.66■□□□□ 0.74
TNFSF13-203ENST00000380535 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
TNFSF13-203ENST00000380535 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
TNFSF13-203ENST00000380535 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
TNFSF13-203ENST00000380535 TET3O43151 1660 aa19.65■□□□□ 0.74
TNFSF13-203ENST00000380535 A2MP01023 1474 aa19.65■□□□□ 0.74
TNFSF13-203ENST00000380535 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.74
TNFSF13-203ENST00000380535 FAM69CQ0P6D2 419 aa19.63■□□□□ 0.73
TNFSF13-203ENST00000380535 ZMYM4Q5VZL5 1548 aa19.62■□□□□ 0.73
TNFSF13-203ENST00000380535 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
TNFSF13-203ENST00000380535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
TNFSF13-203ENST00000380535 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
TNFSF13-203ENST00000380535 PPRC1Q5VV67 1664 aaKnown RBP19.6■□□□□ 0.73
TNFSF13-203ENST00000380535 ABCA6Q8N139 1617 aa19.59■□□□□ 0.73
TNFSF13-203ENST00000380535 LMTK2Q8IWU2 1503 aa19.59■□□□□ 0.73
TNFSF13-203ENST00000380535 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.73
TNFSF13-203ENST00000380535 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
TNFSF13-203ENST00000380535 MIER1Q8N108 512 aa19.57■□□□□ 0.72
TNFSF13-203ENST00000380535 E9PCH4 1651 aa19.57■□□□□ 0.72
TNFSF13-203ENST00000380535 DIP2CQ9Y2E4 1556 aa19.56■□□□□ 0.72
TNFSF13-203ENST00000380535 KIF3BO15066 747 aa19.55■□□□□ 0.72
TNFSF13-203ENST00000380535 SPHKAPQ2M3C7 1700 aa19.55■□□□□ 0.72
TNFSF13-203ENST00000380535 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
TNFSF13-203ENST00000380535 FRMPD1Q5SYB0 1578 aa19.55■□□□□ 0.72
TNFSF13-203ENST00000380535 TRPM2O94759 1503 aa19.54■□□□□ 0.72
TNFSF13-203ENST00000380535 TSPOAP1O95153 1857 aa19.53■□□□□ 0.72
TNFSF13-203ENST00000380535 NEURL4Q96JN8 1562 aa19.52■□□□□ 0.72
TNFSF13-203ENST00000380535 PTPRTO14522 1441 aa19.52■□□□□ 0.72
TNFSF13-203ENST00000380535 PLA2R1Q13018 1463 aa19.52■□□□□ 0.72
TNFSF13-203ENST00000380535 REREQ9P2R6 1566 aa19.52■□□□□ 0.72
TNFSF13-203ENST00000380535 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.71
TNFSF13-203ENST00000380535 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
TNFSF13-203ENST00000380535 STAC3Q96MF2 364 aa19.49■□□□□ 0.71
TNFSF13-203ENST00000380535 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
TNFSF13-203ENST00000380535 CEP152O94986 1710 aa19.49■□□□□ 0.71
TNFSF13-203ENST00000380535 RAPGEF3O95398 923 aa19.49■□□□□ 0.71
TNFSF13-203ENST00000380535 EIF4G2P78344 907 aaKnown RBP eCLIP19.47■□□□□ 0.71
TNFSF13-203ENST00000380535 RALGAPBQ86X10 1494 aa19.46■□□□□ 0.71
TNFSF13-203ENST00000380535 AGLP35573 1532 aa19.43■□□□□ 0.7
TNFSF13-203ENST00000380535 NBPF8Q3BBV2 869 aa19.42■□□□□ 0.7
TNFSF13-203ENST00000380535 ABCC3O15438 1527 aa19.42■□□□□ 0.7
TNFSF13-203ENST00000380535 CAMSAP1Q5T5Y3 1602 aa19.41■□□□□ 0.7
TNFSF13-203ENST00000380535 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 SPATA31E1Q6ZUB1 1445 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 CLTCL1P53675 1640 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 ARHGAP31Q2M1Z3 1444 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 YEATS2Q9ULM3 1422 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 KIF1BO60333 1816 aa19.4■□□□□ 0.7
TNFSF13-203ENST00000380535 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.7
TNFSF13-203ENST00000380535 LAMC1P11047 1609 aa19.39■□□□□ 0.69
TNFSF13-203ENST00000380535 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
TNFSF13-203ENST00000380535 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
TNFSF13-203ENST00000380535 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
TNFSF13-203ENST00000380535 DCAF11Q8TEB1 546 aa19.37■□□□□ 0.69
TNFSF13-203ENST00000380535 ARXQ96QS3 562 aa19.37■□□□□ 0.69
TNFSF13-203ENST00000380535 PRAG1Q86YV5 1406 aa19.37■□□□□ 0.69
TNFSF13-203ENST00000380535 TRPM1Q7Z4N2 1603 aa19.37■□□□□ 0.69
TNFSF13-203ENST00000380535 WASHC2CQ9Y4E1 1318 aa19.36■□□□□ 0.69
TNFSF13-203ENST00000380535 GGT6Q6P531 493 aa19.35■□□□□ 0.69
TNFSF13-203ENST00000380535 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
TNFSF13-203ENST00000380535 NPATQ14207 1427 aa19.33■□□□□ 0.68
TNFSF13-203ENST00000380535 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
TNFSF13-203ENST00000380535 ARID4BQ4LE39 1312 aaPredicted RBP19.31■□□□□ 0.68
TNFSF13-203ENST00000380535 GPRASP1Q5JY77 1395 aa19.31■□□□□ 0.68
TNFSF13-203ENST00000380535 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
TNFSF13-203ENST00000380535 USP47Q96K76 1375 aa19.3■□□□□ 0.68
TNFSF13-203ENST00000380535 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
TNFSF13-203ENST00000380535 NOS1P29475 1434 aa19.3■□□□□ 0.68
TNFSF13-203ENST00000380535 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
TNFSF13-203ENST00000380535 MYOM2P54296 1465 aa19.29■□□□□ 0.68
TNFSF13-203ENST00000380535 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
TNFSF13-203ENST00000380535 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
TNFSF13-203ENST00000380535 MADDQ8WXG6 1647 aa19.29■□□□□ 0.68
TNFSF13-203ENST00000380535 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
TNFSF13-203ENST00000380535 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
TNFSF13-203ENST00000380535 IFT172Q9UG01 1749 aa19.27■□□□□ 0.68
TNFSF13-203ENST00000380535 PIK3C2BO00750 1634 aa19.27■□□□□ 0.68
TNFSF13-203ENST00000380535 COL17A1Q9UMD9 1497 aaPredicted RBP19.26■□□□□ 0.67
TNFSF13-203ENST00000380535 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
TNFSF13-203ENST00000380535 PREX1Q8TCU6 1659 aa19.24■□□□□ 0.67
TNFSF13-203ENST00000380535 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
TNFSF13-203ENST00000380535 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
TNFSF13-203ENST00000380535 SLC52A1Q9NWF4 448 aa19.22■□□□□ 0.67
TNFSF13-203ENST00000380535 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms