RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
PRPF40B-202ENST00000380281 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
PRPF40B-202ENST00000380281 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
PRPF40B-202ENST00000380281 CRBNQ96SW2 442 aa16.42■□□□□ 0.22
PRPF40B-202ENST00000380281 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
PRPF40B-202ENST00000380281 ADAMTS12P58397 1594 aa16.42■□□□□ 0.22
PRPF40B-202ENST00000380281 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
PRPF40B-202ENST00000380281 KIF14Q15058 1648 aa16.42■□□□□ 0.22
PRPF40B-202ENST00000380281 PDE4AP27815 886 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 GSE1Q14687 1217 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
PRPF40B-202ENST00000380281 RALBP1Q15311 655 aa16.4■□□□□ 0.22
PRPF40B-202ENST00000380281 DNMT1P26358 1616 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-202ENST00000380281 KTN1Q86UP2 1357 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-202ENST00000380281 RGS3P49796 1198 aa16.39■□□□□ 0.21
PRPF40B-202ENST00000380281 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
PRPF40B-202ENST00000380281 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-202ENST00000380281 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
PRPF40B-202ENST00000380281 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
PRPF40B-202ENST00000380281 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
PRPF40B-202ENST00000380281 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-202ENST00000380281 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-202ENST00000380281 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
PRPF40B-202ENST00000380281 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
PRPF40B-202ENST00000380281 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
PRPF40B-202ENST00000380281 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
PRPF40B-202ENST00000380281 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
PRPF40B-202ENST00000380281 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
PRPF40B-202ENST00000380281 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
PRPF40B-202ENST00000380281 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
PRPF40B-202ENST00000380281 RSPH6AQ9H0K4 717 aa16.32■□□□□ 0.2
PRPF40B-202ENST00000380281 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
PRPF40B-202ENST00000380281 TMF1P82094 1093 aa16.31■□□□□ 0.2
PRPF40B-202ENST00000380281 NFKBIBQ15653 356 aa16.31■□□□□ 0.2
PRPF40B-202ENST00000380281 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
PRPF40B-202ENST00000380281 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-202ENST00000380281 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-202ENST00000380281 VSIG10Q8N0Z9 540 aa16.3■□□□□ 0.2
PRPF40B-202ENST00000380281 ATP10BO94823 1461 aa16.29■□□□□ 0.2
PRPF40B-202ENST00000380281 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-202ENST00000380281 MBD5Q9P267 1494 aa16.27■□□□□ 0.2
PRPF40B-202ENST00000380281 PTPRGP23470 1445 aa16.27■□□□□ 0.2
PRPF40B-202ENST00000380281 ARID4BQ4LE39 1312 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-202ENST00000380281 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
PRPF40B-202ENST00000380281 KDM5CP41229 1560 aa16.27■□□□□ 0.2
PRPF40B-202ENST00000380281 TESK2Q96S53 571 aa16.27■□□□□ 0.19
PRPF40B-202ENST00000380281 ZMYND15Q9H091 742 aa16.27■□□□□ 0.19
PRPF40B-202ENST00000380281 MAGI1Q96QZ7 1491 aaPredicted RBP16.27■□□□□ 0.19
PRPF40B-202ENST00000380281 LRPPRCP42704 1394 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-202ENST00000380281 RALGAPBQ86X10 1494 aa16.26■□□□□ 0.19
PRPF40B-202ENST00000380281 AFAP1Q8N556 730 aa16.25■□□□□ 0.19
PRPF40B-202ENST00000380281 APAF1O14727 1248 aa16.24■□□□□ 0.19
PRPF40B-202ENST00000380281 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-202ENST00000380281 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-202ENST00000380281 BCAR3O75815 825 aa16.22■□□□□ 0.19
PRPF40B-202ENST00000380281 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
PRPF40B-202ENST00000380281 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-202ENST00000380281 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
PRPF40B-202ENST00000380281 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
PRPF40B-202ENST00000380281 ARXQ96QS3 562 aa16.21■□□□□ 0.19
PRPF40B-202ENST00000380281 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
PRPF40B-202ENST00000380281 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 NUTM2DQ5VT03 806 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 PARD3Q8TEW0 1356 aa16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
PRPF40B-202ENST00000380281 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
PRPF40B-202ENST00000380281 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 UHRF1BP1Q6BDS2 1440 aa16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
PRPF40B-202ENST00000380281 ADGRL2O95490 1459 aa16.17■□□□□ 0.18
PRPF40B-202ENST00000380281 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
PRPF40B-202ENST00000380281 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
PRPF40B-202ENST00000380281 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
PRPF40B-202ENST00000380281 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
PRPF40B-202ENST00000380281 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
PRPF40B-202ENST00000380281 SAFB2Q14151 953 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRPF40B-202ENST00000380281 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
PRPF40B-202ENST00000380281 ARHGAP5Q13017 1502 aa16.15■□□□□ 0.18
PRPF40B-202ENST00000380281 KIF3BO15066 747 aa16.14■□□□□ 0.17
PRPF40B-202ENST00000380281 DUSP27Q5VZP5 1158 aa16.14■□□□□ 0.17
PRPF40B-202ENST00000380281 RRAGDQ9NQL2 400 aaPredicted RBP16.14■□□□□ 0.17
PRPF40B-202ENST00000380281 A2MP01023 1474 aa16.14■□□□□ 0.17
PRPF40B-202ENST00000380281 DDRGK1Q96HY6 314 aa16.14■□□□□ 0.17
PRPF40B-202ENST00000380281 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
PRPF40B-202ENST00000380281 PANK1Q8TE04 598 aa16.13■□□□□ 0.17
PRPF40B-202ENST00000380281 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
PRPF40B-202ENST00000380281 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
PRPF40B-202ENST00000380281 ABCC10Q5T3U5 1492 aa16.12■□□□□ 0.17
PRPF40B-202ENST00000380281 SPRYD3Q8NCJ5 442 aa16.12■□□□□ 0.17
PRPF40B-202ENST00000380281 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
PRPF40B-202ENST00000380281 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
PRPF40B-202ENST00000380281 ADGBQ8N7X0 1667 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms