RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 CROCC2H7BZ55 1655 aa9.23□□□□□ -0.93
FOCAD-202ENST00000380249 WASHC2CQ9Y4E1 1318 aa9.23□□□□□ -0.93
FOCAD-202ENST00000380249 NUP155O75694 1391 aa9.22□□□□□ -0.93
FOCAD-202ENST00000380249 ARHGAP31Q2M1Z3 1444 aa9.22□□□□□ -0.93
FOCAD-202ENST00000380249 ABCA6Q8N139 1617 aa9.22□□□□□ -0.93
FOCAD-202ENST00000380249 BCORL1Q5H9F3 1711 aa9.21□□□□□ -0.94
FOCAD-202ENST00000380249 RAB3GAP2Q9H2M9 1393 aa9.2□□□□□ -0.94
FOCAD-202ENST00000380249 LMTK2Q8IWU2 1503 aa9.2□□□□□ -0.94
FOCAD-202ENST00000380249 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
FOCAD-202ENST00000380249 PRDM15P57071 1507 aaPredicted RBP9.19□□□□□ -0.94
FOCAD-202ENST00000380249 RPRD2Q5VT52 1461 aaKnown RBP9.19□□□□□ -0.94
FOCAD-202ENST00000380249 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
FOCAD-202ENST00000380249 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
FOCAD-202ENST00000380249 RNF17Q9BXT8 1623 aaKnown RBP9.18□□□□□ -0.94
FOCAD-202ENST00000380249 MLECQ14165 292 aa9.17□□□□□ -0.94
FOCAD-202ENST00000380249 PCGF6Q9BYE7 350 aa9.17□□□□□ -0.94
FOCAD-202ENST00000380249 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
FOCAD-202ENST00000380249 GCC2Q8IWJ2 1684 aa9.17□□□□□ -0.94
FOCAD-202ENST00000380249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.944e-6■□□□□ 11.1
FOCAD-202ENST00000380249 VWDEQ8N2E2 1590 aa9.17□□□□□ -0.94
FOCAD-202ENST00000380249 NPATQ14207 1427 aa9.16□□□□□ -0.94
FOCAD-202ENST00000380249 UNC13BO14795 1591 aa9.15□□□□□ -0.94
FOCAD-202ENST00000380249 ZMYM3Q14202 1370 aa9.15□□□□□ -0.94
FOCAD-202ENST00000380249 MPHOSPH9Q99550 1183 aa9.15□□□□□ -0.95
FOCAD-202ENST00000380249 ABCC3O15438 1527 aa9.14□□□□□ -0.95
FOCAD-202ENST00000380249 PZPP20742 1482 aa9.14□□□□□ -0.95
FOCAD-202ENST00000380249 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
FOCAD-202ENST00000380249 DEPDC5O75140 1603 aa9.14□□□□□ -0.95
FOCAD-202ENST00000380249 PKD2Q13563 968 aa9.13□□□□□ -0.95
FOCAD-202ENST00000380249 ZC3H13Q5T200 1668 aaKnown RBP9.13□□□□□ -0.95
FOCAD-202ENST00000380249 SETD1BQ9UPS6 1966 aaKnown RBP9.12□□□□□ -0.95
FOCAD-202ENST00000380249 NOS1P29475 1434 aa9.12□□□□□ -0.95
FOCAD-202ENST00000380249 MROH1Q8NDA8 1641 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 ADAMTSL3P82987 1691 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 EFCAB6Q5THR3 1501 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 PTPRMP28827 1452 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 IQGAP3Q86VI3 1631 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 PTPRTO14522 1441 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 TNRQ92752 1358 aa9.11□□□□□ -0.95
FOCAD-202ENST00000380249 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
FOCAD-202ENST00000380249 NLRP1Q9C000 1473 aa9.1□□□□□ -0.95
FOCAD-202ENST00000380249 TET3O43151 1660 aa9.1□□□□□ -0.95
FOCAD-202ENST00000380249 MROH2AA6NES4 1674 aa9.09□□□□□ -0.95
FOCAD-202ENST00000380249 KDM4FA0A1W2PPD8 638 aa9.08□□□□□ -0.96
FOCAD-202ENST00000380249 THEMISQ8N1K5 641 aaPredicted RBP9.08□□□□□ -0.96
FOCAD-202ENST00000380249 ERVK-7P63135 1459 aa9.08□□□□□ -0.96
FOCAD-202ENST00000380249 CCDC144AA2RUR9 1427 aa9.08□□□□□ -0.96
FOCAD-202ENST00000380249 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
FOCAD-202ENST00000380249 RPGRIP1LQ68CZ1 1315 aa9.07□□□□□ -0.96
FOCAD-202ENST00000380249 DHX57Q6P158 1386 aaKnown RBP9.07□□□□□ -0.96
FOCAD-202ENST00000380249 ANKRD30BQ9BXX2 1392 aa9.07□□□□□ -0.96
FOCAD-202ENST00000380249 MADDQ8WXG6 1647 aa9.06□□□□□ -0.96
FOCAD-202ENST00000380249 UHRF1BP1Q6BDS2 1440 aa9.06□□□□□ -0.96
FOCAD-202ENST00000380249 STAG3Q9UJ98 1225 aa9.05□□□□□ -0.96
FOCAD-202ENST00000380249 A2ML1A8K2U0 1454 aa9.05□□□□□ -0.96
FOCAD-202ENST00000380249 IDI1Q13907 227 aa9.05□□□□□ -0.96
FOCAD-202ENST00000380249 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
FOCAD-202ENST00000380249 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.04□□□□□ -0.96
FOCAD-202ENST00000380249 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
FOCAD-202ENST00000380249 TRPM2O94759 1503 aa9.03□□□□□ -0.96
FOCAD-202ENST00000380249 FER1L4A9Z1Z3 1794 aa9.03□□□□□ -0.96
FOCAD-202ENST00000380249 PLA2R1Q13018 1463 aa9.03□□□□□ -0.96
FOCAD-202ENST00000380249 CAMSAP1Q5T5Y3 1602 aa9.03□□□□□ -0.96
FOCAD-202ENST00000380249 CCER1Q8TC90 406 aaPredicted RBP9.02□□□□□ -0.96
FOCAD-202ENST00000380249 NEURL4Q96JN8 1562 aa9.02□□□□□ -0.96
FOCAD-202ENST00000380249 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
FOCAD-202ENST00000380249 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
FOCAD-202ENST00000380249 SIGLEC1Q9BZZ2 1709 aa9.01□□□□□ -0.97
FOCAD-202ENST00000380249 DMRT2Q9Y5R5 561 aa9.01□□□□□ -0.97
FOCAD-202ENST00000380249 AEBP2Q6ZN18 517 aaPredicted RBP9.01□□□□□ -0.97
FOCAD-202ENST00000380249 RIMS1Q86UR5 1692 aaKnown RBP9.01□□□□□ -0.97
FOCAD-202ENST00000380249 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
FOCAD-202ENST00000380249 ZFYVE9O95405 1425 aa9□□□□□ -0.97
FOCAD-202ENST00000380249 ANKLE2Q86XL3 938 aa9□□□□□ -0.97
FOCAD-202ENST00000380249 TMEM2Q9UHN6 1383 aa9□□□□□ -0.97
FOCAD-202ENST00000380249 SPATA31E1Q6ZUB1 1445 aa8.99□□□□□ -0.97
FOCAD-202ENST00000380249 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
FOCAD-202ENST00000380249 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
FOCAD-202ENST00000380249 KDM5AP29375 1690 aaKnown RBP8.98□□□□□ -0.97
FOCAD-202ENST00000380249 E9PCH4 1651 aa8.98□□□□□ -0.97
FOCAD-202ENST00000380249 CEP152O94986 1710 aa8.98□□□□□ -0.97
FOCAD-202ENST00000380249 ZEB1P37275 1124 aaPredicted RBP8.98□□□□□ -0.97
FOCAD-202ENST00000380249 ARHGAP23Q9P227 1491 aa8.98□□□□□ -0.97
FOCAD-202ENST00000380249 PREX1Q8TCU6 1659 aa8.97□□□□□ -0.97
FOCAD-202ENST00000380249 UGGT1Q9NYU2 1555 aa8.97□□□□□ -0.97
FOCAD-202ENST00000380249 PPP1R15AO75807 674 aaPredicted RBP8.97□□□□□ -0.97
FOCAD-202ENST00000380249 C3P01024 1663 aa8.97□□□□□ -0.97
FOCAD-202ENST00000380249 FOXD1Q16676 465 aa8.97□□□□□ -0.97
FOCAD-202ENST00000380249 ADGRB3O60242 1522 aa8.96□□□□□ -0.97
FOCAD-202ENST00000380249 ZNF326Q5BKZ1 582 aaKnown RBP8.96□□□□□ -0.98
FOCAD-202ENST00000380249 CEP170BQ9Y4F5 1589 aaPredicted RBP8.96□□□□□ -0.98
FOCAD-202ENST00000380249 PLPPR3Q6T4P5 718 aa8.96□□□□□ -0.98
FOCAD-202ENST00000380249 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
FOCAD-202ENST00000380249 SLIT1O75093 1534 aa8.96□□□□□ -0.98
FOCAD-202ENST00000380249 SYNMO15061 1565 aa8.96□□□□□ -0.98
FOCAD-202ENST00000380249 PIK3C2BO00750 1634 aa8.95□□□□□ -0.98
FOCAD-202ENST00000380249 TBX22Q9Y458 520 aa8.95□□□□□ -0.98
FOCAD-202ENST00000380249 PIK3R4Q99570 1358 aa8.95□□□□□ -0.98
FOCAD-202ENST00000380249 RIMS2Q9UQ26 1411 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms