RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 ABCC5O15440 1437 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 KDM6BO15054 1643 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 HFM1A2PYH4 1435 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 TTC37Q6PGP7 1564 aa14.25□□□□□ -0.13
ITSN1-201ENST00000379960 ZBED9Q6R2W3 1325 aa14.24□□□□□ -0.13
ITSN1-201ENST00000379960 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
ITSN1-201ENST00000379960 TCERG1O14776 1098 aaKnown RBP14.23□□□□□ -0.13
ITSN1-201ENST00000379960 DNMT1P26358 1616 aaKnown RBP14.22□□□□□ -0.13
ITSN1-201ENST00000379960 FOXD1Q16676 465 aa14.22□□□□□ -0.13
ITSN1-201ENST00000379960 ARXQ96QS3 562 aa14.21□□□□□ -0.13
ITSN1-201ENST00000379960 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.13
ITSN1-201ENST00000379960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.13
ITSN1-201ENST00000379960 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
ITSN1-201ENST00000379960 CLCN1P35523 988 aa14.2□□□□□ -0.14
ITSN1-201ENST00000379960 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
ITSN1-201ENST00000379960 KDM5BQ9UGL1 1544 aa14.19□□□□□ -0.14
ITSN1-201ENST00000379960 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
ITSN1-201ENST00000379960 PDCL3Q9H2J4 239 aa14.18□□□□□ -0.14
ITSN1-201ENST00000379960 POGKQ9P215 609 aa14.18□□□□□ -0.14
ITSN1-201ENST00000379960 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
ITSN1-201ENST00000379960 UHRF1BP1LA0JNW5 1464 aa14.17□□□□□ -0.14
ITSN1-201ENST00000379960 TSPY4P0CV99 314 aa14.17□□□□□ -0.14
ITSN1-201ENST00000379960 TSPY10P0CW01 314 aa14.17□□□□□ -0.14
ITSN1-201ENST00000379960 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
ITSN1-201ENST00000379960 SAMD9LQ8IVG5 1584 aa14.16□□□□□ -0.14
ITSN1-201ENST00000379960 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
ITSN1-201ENST00000379960 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
ITSN1-201ENST00000379960 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
ITSN1-201ENST00000379960 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.15
ITSN1-201ENST00000379960 CENPJQ9HC77 1338 aaPredicted RBP14.14□□□□□ -0.15
ITSN1-201ENST00000379960 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
ITSN1-201ENST00000379960 CHMP4BQ9H444 224 aaKnown RBP14.14□□□□□ -0.15
ITSN1-201ENST00000379960 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
ITSN1-201ENST00000379960 TAF7LQ5H9L4 462 aa14.13□□□□□ -0.15
ITSN1-201ENST00000379960 ASXL2Q76L83 1435 aa14.13□□□□□ -0.15
ITSN1-201ENST00000379960 MS4A1P11836 297 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 NCOA1Q15788 1441 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 RNF123Q5XPI4 1314 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 WDR7Q9Y4E6 1490 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 SMG6Q86US8 1419 aaKnown RBP14.12□□□□□ -0.15
ITSN1-201ENST00000379960 NUDCQ9Y266 331 aa14.12□□□□□ -0.15
ITSN1-201ENST00000379960 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
ITSN1-201ENST00000379960 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
ITSN1-201ENST00000379960 ANKRD30AQ9BXX3 1397 aa14.11□□□□□ -0.15
ITSN1-201ENST00000379960 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
ITSN1-201ENST00000379960 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
ITSN1-201ENST00000379960 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
ITSN1-201ENST00000379960 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
ITSN1-201ENST00000379960 ADGBQ8N7X0 1667 aa14.09□□□□□ -0.15
ITSN1-201ENST00000379960 ROCK1Q13464 1354 aa14.09□□□□□ -0.15
ITSN1-201ENST00000379960 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
ITSN1-201ENST00000379960 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
ITSN1-201ENST00000379960 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
ITSN1-201ENST00000379960 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.16
ITSN1-201ENST00000379960 PLCH2O75038 1416 aa14.08□□□□□ -0.16
ITSN1-201ENST00000379960 ZHX1Q9UKY1 873 aaPredicted RBP14.08□□□□□ -0.16
ITSN1-201ENST00000379960 EXOC6Q8TAG9 804 aa14.07□□□□□ -0.16
ITSN1-201ENST00000379960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.162e-6■■■■□ 24.2
ITSN1-201ENST00000379960 KIF15Q9NS87 1388 aa14.07□□□□□ -0.16
ITSN1-201ENST00000379960 PANK2Q9BZ23 570 aa14.07□□□□□ -0.16
ITSN1-201ENST00000379960 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
ITSN1-201ENST00000379960 CCDC141Q6ZP82 1450 aa14.07□□□□□ -0.16
ITSN1-201ENST00000379960 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
ITSN1-201ENST00000379960 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.16
ITSN1-201ENST00000379960 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
ITSN1-201ENST00000379960 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
ITSN1-201ENST00000379960 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
ITSN1-201ENST00000379960 TPM2P07951 284 aa14.05□□□□□ -0.16
ITSN1-201ENST00000379960 TRAPPC8Q9Y2L5 1435 aa14.04□□□□□ -0.16
ITSN1-201ENST00000379960 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
ITSN1-201ENST00000379960 CANXP27824 592 aaKnown RBP14.04□□□□□ -0.16
ITSN1-201ENST00000379960 STAC3Q96MF2 364 aa14.04□□□□□ -0.16
ITSN1-201ENST00000379960 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
ITSN1-201ENST00000379960 KLHL34Q8N239 644 aa14.03□□□□□ -0.16
ITSN1-201ENST00000379960 ADGRL2O95490 1459 aa14.03□□□□□ -0.16
ITSN1-201ENST00000379960 FANCAO15360 1455 aa14.02□□□□□ -0.16
ITSN1-201ENST00000379960 NUP155O75694 1391 aa14.02□□□□□ -0.16
ITSN1-201ENST00000379960 ARHGEF5Q12774 1597 aa14.02□□□□□ -0.17
ITSN1-201ENST00000379960 PKD2Q13563 968 aa14.01□□□□□ -0.17
ITSN1-201ENST00000379960 GOLGA6L3A6NEY3 463 aa14□□□□□ -0.17
ITSN1-201ENST00000379960 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
ITSN1-201ENST00000379960 ESPNB1AK53 854 aa14□□□□□ -0.17
ITSN1-201ENST00000379960 ARID3AQ99856 593 aa14□□□□□ -0.17
ITSN1-201ENST00000379960 ERBB4Q15303 1308 aa13.99□□□□□ -0.17
ITSN1-201ENST00000379960 ABCC1P33527 1531 aa13.99□□□□□ -0.17
ITSN1-201ENST00000379960 ABCA9Q8IUA7 1624 aa13.99□□□□□ -0.17
ITSN1-201ENST00000379960 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
ITSN1-201ENST00000379960 RSPH4AQ5TD94 716 aa13.99□□□□□ -0.17
ITSN1-201ENST00000379960 PRDM10Q9NQV6 1147 aa13.99□□□□□ -0.17
ITSN1-201ENST00000379960 PZPP20742 1482 aa13.98□□□□□ -0.17
ITSN1-201ENST00000379960 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
ITSN1-201ENST00000379960 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
ITSN1-201ENST00000379960 CD109Q6YHK3 1445 aa13.97□□□□□ -0.17
ITSN1-201ENST00000379960 KIAA1211Q6ZU35 1233 aa13.97□□□□□ -0.17
ITSN1-201ENST00000379960 PLEKHH2Q8IVE3 1493 aa13.97□□□□□ -0.17
ITSN1-201ENST00000379960 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms