RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
AGRN-201ENST00000379370 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
AGRN-201ENST00000379370 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
AGRN-201ENST00000379370 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
AGRN-201ENST00000379370 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
AGRN-201ENST00000379370 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
AGRN-201ENST00000379370 IPO8O15397 1037 aaKnown RBP17.98■□□□□ 0.47
AGRN-201ENST00000379370 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
AGRN-201ENST00000379370 CHAF1AQ13111 956 aaPredicted RBP17.96■□□□□ 0.47
AGRN-201ENST00000379370 TRIM34Q9BYJ4 488 aa17.96■□□□□ 0.47
AGRN-201ENST00000379370 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
AGRN-201ENST00000379370 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
AGRN-201ENST00000379370 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
AGRN-201ENST00000379370 CTDP1Q9Y5B0 961 aaPredicted RBP17.96■□□□□ 0.47
AGRN-201ENST00000379370 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
AGRN-201ENST00000379370 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
AGRN-201ENST00000379370 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
AGRN-201ENST00000379370 CLUAP1Q96AJ1 413 aa17.93■□□□□ 0.46
AGRN-201ENST00000379370 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
AGRN-201ENST00000379370 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
AGRN-201ENST00000379370 TCEAL9Q9UHQ7 104 aa17.91■□□□□ 0.46
AGRN-201ENST00000379370 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
AGRN-201ENST00000379370 PTPRGP23470 1445 aa17.9■□□□□ 0.46
AGRN-201ENST00000379370 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
AGRN-201ENST00000379370 PSME1Q06323 249 aa17.9■□□□□ 0.46
AGRN-201ENST00000379370 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
AGRN-201ENST00000379370 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
AGRN-201ENST00000379370 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
AGRN-201ENST00000379370 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
AGRN-201ENST00000379370 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
AGRN-201ENST00000379370 EIF2S2P20042 333 aaKnown RBP17.88■□□□□ 0.45
AGRN-201ENST00000379370 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
AGRN-201ENST00000379370 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
AGRN-201ENST00000379370 FOXD4L5Q5VV16 416 aaPredicted RBP17.86■□□□□ 0.45
AGRN-201ENST00000379370 FOXD4L4Q8WXT5 416 aaPredicted RBP17.86■□□□□ 0.45
AGRN-201ENST00000379370 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
AGRN-201ENST00000379370 GZF1Q9H116 711 aaPredicted RBP17.86■□□□□ 0.45
AGRN-201ENST00000379370 ARID3AQ99856 593 aa17.85■□□□□ 0.45
AGRN-201ENST00000379370 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
AGRN-201ENST00000379370 RSPH4AQ5TD94 716 aa17.85■□□□□ 0.45
AGRN-201ENST00000379370 TTC5Q8N0Z6 440 aa17.84■□□□□ 0.45
AGRN-201ENST00000379370 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
AGRN-201ENST00000379370 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
AGRN-201ENST00000379370 MFAP1P55081 439 aaKnown RBP17.83■□□□□ 0.45
AGRN-201ENST00000379370 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
AGRN-201ENST00000379370 CEP89Q96ST8 783 aa17.83■□□□□ 0.45
AGRN-201ENST00000379370 DHX16O60231 1041 aaKnown RBP17.82■□□□□ 0.44
AGRN-201ENST00000379370 NUTM2GQ5VZR2 741 aa17.82■□□□□ 0.44
AGRN-201ENST00000379370 TEFQ10587 303 aa17.82■□□□□ 0.44
AGRN-201ENST00000379370 COG3Q96JB2 828 aa17.81■□□□□ 0.44
AGRN-201ENST00000379370 ATF3P18847 181 aa17.81■□□□□ 0.44
AGRN-201ENST00000379370 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
AGRN-201ENST00000379370 RILPL2Q969X0 211 aa17.8■□□□□ 0.44
AGRN-201ENST00000379370 RALBP1Q15311 655 aa17.8■□□□□ 0.44
AGRN-201ENST00000379370 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
AGRN-201ENST00000379370 CCDC144AA2RUR9 1427 aa17.79■□□□□ 0.44
AGRN-201ENST00000379370 CHMP4AQ9BY43 222 aa17.79■□□□□ 0.44
AGRN-201ENST00000379370 NUTM2BA6NNL0 878 aaPredicted RBP17.79■□□□□ 0.44
AGRN-201ENST00000379370 NUTM2EB1AL46 878 aaPredicted RBP17.79■□□□□ 0.44
AGRN-201ENST00000379370 NUTM2AQ8IVF1 878 aaPredicted RBP17.79■□□□□ 0.44
AGRN-201ENST00000379370 HMMRO75330 724 aa17.78■□□□□ 0.44
AGRN-201ENST00000379370 APPP05067 770 aa17.78■□□□□ 0.44
AGRN-201ENST00000379370 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
AGRN-201ENST00000379370 L3MBTL2Q969R5 705 aa17.77■□□□□ 0.44
AGRN-201ENST00000379370 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
AGRN-201ENST00000379370 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
AGRN-201ENST00000379370 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
AGRN-201ENST00000379370 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.43
AGRN-201ENST00000379370 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
AGRN-201ENST00000379370 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
AGRN-201ENST00000379370 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 AKAP17AQ02040 695 aaKnown RBP17.76■□□□□ 0.43
AGRN-201ENST00000379370 AMOTL1Q8IY63 956 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
AGRN-201ENST00000379370 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 FYB1O15117 783 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
AGRN-201ENST00000379370 BCL2L13Q9BXK5 485 aa17.75■□□□□ 0.43
AGRN-201ENST00000379370 SF3B2Q13435 895 aaKnown RBP17.75■□□□□ 0.43
AGRN-201ENST00000379370 RBM33Q96EV2 1170 aaKnown RBP17.75■□□□□ 0.43
AGRN-201ENST00000379370 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
AGRN-201ENST00000379370 TPM4P67936 248 aa17.75■□□□□ 0.43
AGRN-201ENST00000379370 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
AGRN-201ENST00000379370 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
AGRN-201ENST00000379370 MTMR7Q9Y216 660 aa17.74■□□□□ 0.43
AGRN-201ENST00000379370 CCDC34Q96HJ3 373 aa17.74■□□□□ 0.43
AGRN-201ENST00000379370 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
AGRN-201ENST00000379370 EVC2Q86UK5 1308 aa17.73■□□□□ 0.43
AGRN-201ENST00000379370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.73■□□□□ 0.43
AGRN-201ENST00000379370 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
AGRN-201ENST00000379370 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
AGRN-201ENST00000379370 TPD52L1Q16890 204 aaPredicted RBP17.73■□□□□ 0.43
AGRN-201ENST00000379370 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
AGRN-201ENST00000379370 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
AGRN-201ENST00000379370 PLIN1O60240 522 aa17.71■□□□□ 0.43
AGRN-201ENST00000379370 H3BQV1 296 aa17.7■□□□□ 0.42
AGRN-201ENST00000379370 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
AGRN-201ENST00000379370 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
AGRN-201ENST00000379370 PANK3Q9H999 370 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms