RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 NCOA1Q15788 1441 aa35.35■■■■□ 3.25
RPP38-201ENST00000378197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.33■■■■□ 3.25
RPP38-201ENST00000378197 ZMYM3Q14202 1370 aa35.32■■■■□ 3.25
RPP38-201ENST00000378197 RNF17Q9BXT8 1623 aaKnown RBP35.32■■■■□ 3.25
RPP38-201ENST00000378197 PTPRKQ15262 1439 aa35.31■■■■□ 3.24
RPP38-201ENST00000378197 ERBINQ96RT1 1412 aa35.31■■■■□ 3.24
RPP38-201ENST00000378197 RRBP1Q9P2E9 1410 aaKnown RBP35.3■■■■□ 3.24
RPP38-201ENST00000378197 LMTK3Q96Q04 1460 aa35.28■■■■□ 3.24
RPP38-201ENST00000378197 KDM5DQ9BY66 1539 aa35.28■■■■□ 3.24
RPP38-201ENST00000378197 FAM135AQ9P2D6 1515 aa35.28■■■■□ 3.24
RPP38-201ENST00000378197 WASHC2CQ9Y4E1 1318 aa35.24■■■■□ 3.23
RPP38-201ENST00000378197 ITGAEP38570 1179 aa35.24■■■■□ 3.23
RPP38-201ENST00000378197 MROH1Q8NDA8 1641 aa35.24■■■■□ 3.23
RPP38-201ENST00000378197 PREX1Q8TCU6 1659 aa35.23■■■■□ 3.23
RPP38-201ENST00000378197 SETD1BQ9UPS6 1966 aaKnown RBP35.2■■■■□ 3.22
RPP38-201ENST00000378197 NPATQ14207 1427 aa35.18■■■■□ 3.22
RPP38-201ENST00000378197 ROCK1Q13464 1354 aa35.17■■■■□ 3.22
RPP38-201ENST00000378197 ABCC3O15438 1527 aa35.17■■■■□ 3.22
RPP38-201ENST00000378197 ZC3H13Q5T200 1668 aaKnown RBP35.16■■■■□ 3.22
RPP38-201ENST00000378197 UHRF1BP1Q6BDS2 1440 aa35.16■■■■□ 3.22
RPP38-201ENST00000378197 PRDM15P57071 1507 aaPredicted RBP35.16■■■■□ 3.22
RPP38-201ENST00000378197 DEPDC5O75140 1603 aa35.15■■■■□ 3.22
RPP38-201ENST00000378197 ANKRD50Q9ULJ7 1429 aa35.14■■■■□ 3.22
RPP38-201ENST00000378197 HSPA2P54652 639 aa35.12■■■■□ 3.21
RPP38-201ENST00000378197 CEP152O94986 1710 aa35.11■■■■□ 3.21
RPP38-201ENST00000378197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.1■■■■□ 3.215e-6■□□□□ 10.5
RPP38-201ENST00000378197 PZPP20742 1482 aa35.1■■■■□ 3.21
RPP38-201ENST00000378197 FBXO31Q5XUX0 539 aaPredicted RBP35.05■■■■□ 3.2
RPP38-201ENST00000378197 CAMSAP1Q5T5Y3 1602 aa35.04■■■■□ 3.2
RPP38-201ENST00000378197 KANK1Q14678 1352 aa35.04■■■■□ 3.2
RPP38-201ENST00000378197 MYO3AQ8NEV4 1616 aa35.02■■■■□ 3.2
RPP38-201ENST00000378197 VWDEQ8N2E2 1590 aa35.01■■■■□ 3.19
RPP38-201ENST00000378197 TNRQ92752 1358 aa34.98■■■■□ 3.19
RPP38-201ENST00000378197 LMTK2Q8IWU2 1503 aa34.95■■■■□ 3.19
RPP38-201ENST00000378197 ZNF142P52746 1687 aaPredicted RBP34.95■■■■□ 3.18
RPP38-201ENST00000378197 UNC13BO14795 1591 aa34.94■■■■□ 3.18
RPP38-201ENST00000378197 ARHGAP31Q2M1Z3 1444 aa34.94■■■■□ 3.18
RPP38-201ENST00000378197 CEP170BQ9Y4F5 1589 aaPredicted RBP34.93■■■■□ 3.18
RPP38-201ENST00000378197 SPATA31D1Q6ZQQ2 1576 aa34.92■■■■□ 3.18
RPP38-201ENST00000378197 ERVK-7P63135 1459 aa34.92■■■■□ 3.18
RPP38-201ENST00000378197 A2ML1A8K2U0 1454 aa34.88■■■■□ 3.17
RPP38-201ENST00000378197 CFAP65Q6ZU64 1925 aaKnown RBP34.87■■■■□ 3.17
RPP38-201ENST00000378197 NAIPQ13075 1403 aa34.87■■■■□ 3.17
RPP38-201ENST00000378197 GCC2Q8IWJ2 1684 aa34.86■■■■□ 3.17
RPP38-201ENST00000378197 EFCAB6Q5THR3 1501 aa34.86■■■■□ 3.17
RPP38-201ENST00000378197 NLRP1Q9C000 1473 aa34.83■■■■□ 3.17
RPP38-201ENST00000378197 STRCQ7RTU9 1775 aa34.82■■■■□ 3.16
RPP38-201ENST00000378197 HFM1A2PYH4 1435 aa34.82■■■■□ 3.16
RPP38-201ENST00000378197 TET3O43151 1660 aa34.8■■■■□ 3.16
RPP38-201ENST00000378197 IQGAP3Q86VI3 1631 aa34.79■■■■□ 3.16
RPP38-201ENST00000378197 NUP155O75694 1391 aa34.78■■■■□ 3.16
RPP38-201ENST00000378197 PLA2R1Q13018 1463 aa34.74■■■■□ 3.15
RPP38-201ENST00000378197 UGGT1Q9NYU2 1555 aa34.74■■■■□ 3.15
RPP38-201ENST00000378197 RPRD2Q5VT52 1461 aaKnown RBP34.73■■■■□ 3.15
RPP38-201ENST00000378197 NOS1P29475 1434 aa34.7■■■■□ 3.15
RPP38-201ENST00000378197 SYNMO15061 1565 aa34.69■■■■□ 3.14
RPP38-201ENST00000378197 DMRT2Q9Y5R5 561 aa34.68■■■■□ 3.14
RPP38-201ENST00000378197 E9PCH4 1651 aa34.68■■■■□ 3.14
RPP38-201ENST00000378197 THEMISQ8N1K5 641 aaPredicted RBP34.66■■■■□ 3.14
RPP38-201ENST00000378197 NCKAP5LQ9HCH0 1330 aa34.66■■■■□ 3.14
RPP38-201ENST00000378197 PTPRTO14522 1441 aa34.63■■■■□ 3.13
RPP38-201ENST00000378197 UBR1Q8IWV7 1749 aa34.63■■■■□ 3.13
RPP38-201ENST00000378197 PKD2Q13563 968 aa34.63■■■■□ 3.13
RPP38-201ENST00000378197 PIK3C2BO00750 1634 aa34.62■■■■□ 3.13
RPP38-201ENST00000378197 IDI1Q13907 227 aa34.59■■■■□ 3.13
RPP38-201ENST00000378197 TRIM52Q96A61 297 aa34.58■■■■□ 3.13
RPP38-201ENST00000378197 POLR1AO95602 1720 aaPredicted RBP34.57■■■■□ 3.12
RPP38-201ENST00000378197 SLC52A1Q9NWF4 448 aa34.56■■■■□ 3.12
RPP38-201ENST00000378197 ANKLE2Q86XL3 938 aa34.53■■■■□ 3.12
RPP38-201ENST00000378197 STAG3Q9UJ98 1225 aa34.52■■■■□ 3.12
RPP38-201ENST00000378197 NEURL4Q96JN8 1562 aa34.52■■■■□ 3.12
RPP38-201ENST00000378197 KDM5AP29375 1690 aaKnown RBP34.52■■■■□ 3.12
RPP38-201ENST00000378197 ADGRB3O60242 1522 aa34.49■■■■□ 3.11
RPP38-201ENST00000378197 SETD5Q9C0A6 1442 aa34.49■■■■□ 3.11
RPP38-201ENST00000378197 SLIT1O75093 1534 aa34.47■■■■□ 3.11
RPP38-201ENST00000378197 ARHGAP23Q9P227 1491 aa34.47■■■■□ 3.11
RPP38-201ENST00000378197 SPHKAPQ2M3C7 1700 aa34.46■■■■□ 3.11
RPP38-201ENST00000378197 SLC4A1APQ9BWU0 796 aaKnown RBP34.44■■■■□ 3.1
RPP38-201ENST00000378197 MED14O60244 1454 aa34.43■■■■□ 3.1
RPP38-201ENST00000378197 TMEM2Q9UHN6 1383 aa34.43■■■■□ 3.1
RPP38-201ENST00000378197 NPHP4O75161 1426 aaPredicted RBP34.42■■■■□ 3.1
RPP38-201ENST00000378197 SCAF11Q99590 1463 aaKnown RBP34.41■■■■□ 3.1
RPP38-201ENST00000378197 TMEM131LA2VDJ0 1609 aa34.39■■■■□ 3.1
RPP38-201ENST00000378197 LTKP29376 864 aa34.39■■■■□ 3.1
RPP38-201ENST00000378197 TXNDC2Q86VQ3 553 aa34.39■■■■□ 3.1
RPP38-201ENST00000378197 RAB3GAP2Q9H2M9 1393 aa34.39■■■■□ 3.1
RPP38-201ENST00000378197 MYO5BQ9ULV0 1848 aa34.37■■■■□ 3.09
RPP38-201ENST00000378197 EID1Q9Y6B2 187 aa34.37■■■■□ 3.09
RPP38-201ENST00000378197 IQGAP1P46940 1657 aa34.37■■■■□ 3.09
RPP38-201ENST00000378197 CHGAP10645 457 aaKnown RBP34.36■■■■□ 3.09
RPP38-201ENST00000378197 ACIN1Q9UKV3 1341 aaKnown RBP34.34■■■■□ 3.09
RPP38-201ENST00000378197 TRPM2O94759 1503 aa34.34■■■■□ 3.09
RPP38-201ENST00000378197 ZNF335Q9H4Z2 1342 aaPredicted RBP34.33■■■■□ 3.09
RPP38-201ENST00000378197 MPHOSPH9Q99550 1183 aa34.32■■■■□ 3.08
RPP38-201ENST00000378197 LTBP4Q8N2S1 1624 aa34.31■■■■□ 3.08
RPP38-201ENST00000378197 CLTCL1P53675 1640 aa34.3■■■■□ 3.08
RPP38-201ENST00000378197 CERKQ8TCT0 537 aa34.29■■■■□ 3.08
RPP38-201ENST00000378197 ZFYVE9O95405 1425 aa34.27■■■■□ 3.08
RPP38-201ENST00000378197 FOXD1Q16676 465 aa34.27■■■■□ 3.08
RPP38-201ENST00000378197 RIMS2Q9UQ26 1411 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms