RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
VRK3-202ENST00000377011 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
VRK3-202ENST00000377011 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
VRK3-202ENST00000377011 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
VRK3-202ENST00000377011 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
VRK3-202ENST00000377011 CNTLNQ9NXG0 1405 aa18.71■□□□□ 0.59
VRK3-202ENST00000377011 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
VRK3-202ENST00000377011 ITGAEP38570 1179 aa18.69■□□□□ 0.58
VRK3-202ENST00000377011 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
VRK3-202ENST00000377011 PREX1Q8TCU6 1659 aa18.69■□□□□ 0.58
VRK3-202ENST00000377011 EIF2AK4Q9P2K8 1649 aaKnown RBP18.69■□□□□ 0.58
VRK3-202ENST00000377011 ADGRL2O95490 1459 aa18.68■□□□□ 0.58
VRK3-202ENST00000377011 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
VRK3-202ENST00000377011 CEP152O94986 1710 aa18.67■□□□□ 0.58
VRK3-202ENST00000377011 ANKRD30AQ9BXX3 1397 aa18.66■□□□□ 0.58
VRK3-202ENST00000377011 SETD1BQ9UPS6 1966 aaKnown RBP18.66■□□□□ 0.58
VRK3-202ENST00000377011 ABCC3O15438 1527 aa18.66■□□□□ 0.58
VRK3-202ENST00000377011 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
VRK3-202ENST00000377011 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
VRK3-202ENST00000377011 RRBP1Q9P2E9 1410 aaKnown RBP18.64■□□□□ 0.57
VRK3-202ENST00000377011 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
VRK3-202ENST00000377011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.57
VRK3-202ENST00000377011 UHRF1BP1Q6BDS2 1440 aa18.62■□□□□ 0.57
VRK3-202ENST00000377011 DEPDC5O75140 1603 aa18.62■□□□□ 0.57
VRK3-202ENST00000377011 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
VRK3-202ENST00000377011 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
VRK3-202ENST00000377011 NPATQ14207 1427 aa18.61■□□□□ 0.57
VRK3-202ENST00000377011 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
VRK3-202ENST00000377011 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
VRK3-202ENST00000377011 PZPP20742 1482 aa18.59■□□□□ 0.57
VRK3-202ENST00000377011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.57
VRK3-202ENST00000377011 ANKRD50Q9ULJ7 1429 aa18.58■□□□□ 0.57
VRK3-202ENST00000377011 CAMSAP1Q5T5Y3 1602 aa18.58■□□□□ 0.57
VRK3-202ENST00000377011 ZC3H13Q5T200 1668 aaKnown RBP18.57■□□□□ 0.56
VRK3-202ENST00000377011 VWDEQ8N2E2 1590 aa18.56■□□□□ 0.56
VRK3-202ENST00000377011 FAM135AQ9P2D6 1515 aa18.56■□□□□ 0.56
VRK3-202ENST00000377011 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
VRK3-202ENST00000377011 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
VRK3-202ENST00000377011 ZNF142P52746 1687 aaPredicted RBP18.53■□□□□ 0.56
VRK3-202ENST00000377011 TNRQ92752 1358 aa18.53■□□□□ 0.56
VRK3-202ENST00000377011 ERVK-7P63135 1459 aa18.52■□□□□ 0.55
VRK3-202ENST00000377011 SPATA31D1Q6ZQQ2 1576 aa18.51■□□□□ 0.55
VRK3-202ENST00000377011 UNC13BO14795 1591 aa18.49■□□□□ 0.55
VRK3-202ENST00000377011 NCKAP5LQ9HCH0 1330 aa18.49■□□□□ 0.55
VRK3-202ENST00000377011 A2ML1A8K2U0 1454 aa18.48■□□□□ 0.55
VRK3-202ENST00000377011 LMTK2Q8IWU2 1503 aa18.48■□□□□ 0.55
VRK3-202ENST00000377011 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
VRK3-202ENST00000377011 NAIPQ13075 1403 aa18.46■□□□□ 0.55
VRK3-202ENST00000377011 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
VRK3-202ENST00000377011 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
VRK3-202ENST00000377011 KANK1Q14678 1352 aa18.45■□□□□ 0.54
VRK3-202ENST00000377011 SYNMO15061 1565 aa18.44■□□□□ 0.54
VRK3-202ENST00000377011 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
VRK3-202ENST00000377011 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
VRK3-202ENST00000377011 E9PCH4 1651 aa18.41■□□□□ 0.54
VRK3-202ENST00000377011 TET3O43151 1660 aa18.41■□□□□ 0.54
VRK3-202ENST00000377011 IQGAP3Q86VI3 1631 aa18.41■□□□□ 0.54
VRK3-202ENST00000377011 NLRP1Q9C000 1473 aa18.41■□□□□ 0.54
VRK3-202ENST00000377011 NOS1P29475 1434 aa18.4■□□□□ 0.54
VRK3-202ENST00000377011 PIK3C2BO00750 1634 aa18.4■□□□□ 0.54
VRK3-202ENST00000377011 NUP155O75694 1391 aa18.4■□□□□ 0.54
VRK3-202ENST00000377011 UBR1Q8IWV7 1749 aa18.39■□□□□ 0.54
VRK3-202ENST00000377011 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
VRK3-202ENST00000377011 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
VRK3-202ENST00000377011 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
VRK3-202ENST00000377011 IDI1Q13907 227 aa18.37■□□□□ 0.53
VRK3-202ENST00000377011 PTPRTO14522 1441 aa18.35■□□□□ 0.53
VRK3-202ENST00000377011 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
VRK3-202ENST00000377011 LTKP29376 864 aa18.32■□□□□ 0.52
VRK3-202ENST00000377011 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
VRK3-202ENST00000377011 MYO5BQ9ULV0 1848 aa18.32■□□□□ 0.52
VRK3-202ENST00000377011 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
VRK3-202ENST00000377011 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
VRK3-202ENST00000377011 ZNF335Q9H4Z2 1342 aaPredicted RBP18.31■□□□□ 0.52
VRK3-202ENST00000377011 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
VRK3-202ENST00000377011 PKD2Q13563 968 aa18.3■□□□□ 0.52
VRK3-202ENST00000377011 ILDR1Q86SU0 546 aaPredicted RBP18.29■□□□□ 0.52
VRK3-202ENST00000377011 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
VRK3-202ENST00000377011 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
VRK3-202ENST00000377011 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
VRK3-202ENST00000377011 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
VRK3-202ENST00000377011 ADGRB3O60242 1522 aa18.27■□□□□ 0.51
VRK3-202ENST00000377011 SLIT1O75093 1534 aa18.27■□□□□ 0.51
VRK3-202ENST00000377011 FOXD1Q16676 465 aa18.26■□□□□ 0.51
VRK3-202ENST00000377011 MED14O60244 1454 aa18.25■□□□□ 0.51
VRK3-202ENST00000377011 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
VRK3-202ENST00000377011 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
VRK3-202ENST00000377011 TMEM131LA2VDJ0 1609 aa18.25■□□□□ 0.51
VRK3-202ENST00000377011 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
VRK3-202ENST00000377011 SPHKAPQ2M3C7 1700 aa18.24■□□□□ 0.51
VRK3-202ENST00000377011 IQGAP1P46940 1657 aa18.24■□□□□ 0.51
VRK3-202ENST00000377011 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
VRK3-202ENST00000377011 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
VRK3-202ENST00000377011 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
VRK3-202ENST00000377011 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
VRK3-202ENST00000377011 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
VRK3-202ENST00000377011 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
VRK3-202ENST00000377011 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
VRK3-202ENST00000377011 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
VRK3-202ENST00000377011 CLTCL1P53675 1640 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms