RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 IQGAP3Q86VI3 1631 aa14.58□□□□□ -0.08
ABCF1-202ENST00000376545 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.08
ABCF1-202ENST00000376545 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.08
ABCF1-202ENST00000376545 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
ABCF1-202ENST00000376545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.57□□□□□ -0.089e-7■■■□□ 17.5
ABCF1-202ENST00000376545 FANCIQ9NVI1 1328 aa14.56□□□□□ -0.08
ABCF1-202ENST00000376545 MYO5CQ9NQX4 1742 aa14.56□□□□□ -0.08
ABCF1-202ENST00000376545 SYCP2Q9BX26 1530 aa14.56□□□□□ -0.08
ABCF1-202ENST00000376545 PRAG1Q86YV5 1406 aa14.55□□□□□ -0.08
ABCF1-202ENST00000376545 LRPPRCP42704 1394 aaKnown RBP14.55□□□□□ -0.08
ABCF1-202ENST00000376545 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
ABCF1-202ENST00000376545 CARD11Q9BXL7 1154 aa14.55□□□□□ -0.08
ABCF1-202ENST00000376545 PLA2R1Q13018 1463 aa14.55□□□□□ -0.08
ABCF1-202ENST00000376545 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
ABCF1-202ENST00000376545 ATP10AO60312 1499 aa14.54□□□□□ -0.08
ABCF1-202ENST00000376545 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
ABCF1-202ENST00000376545 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
ABCF1-202ENST00000376545 ABCC2Q92887 1545 aa14.52□□□□□ -0.08
ABCF1-202ENST00000376545 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.08
ABCF1-202ENST00000376545 PLEKHH2Q8IVE3 1493 aa14.52□□□□□ -0.09
ABCF1-202ENST00000376545 NUDCQ9Y266 331 aa14.52□□□□□ -0.09
ABCF1-202ENST00000376545 BRD4O60885 1362 aaPredicted RBP14.52□□□□□ -0.09
ABCF1-202ENST00000376545 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
ABCF1-202ENST00000376545 ARHGAP5Q13017 1502 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 A2MP01023 1474 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 DUOX2Q9NRD8 1548 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 MSH5O43196 834 aa14.5□□□□□ -0.09
ABCF1-202ENST00000376545 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
ABCF1-202ENST00000376545 RALBP1Q15311 655 aa14.49□□□□□ -0.09
ABCF1-202ENST00000376545 MYBBP1AQ9BQG0 1328 aaKnown RBP14.48□□□□□ -0.09
ABCF1-202ENST00000376545 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
ABCF1-202ENST00000376545 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
ABCF1-202ENST00000376545 PARD3Q8TEW0 1356 aa14.47□□□□□ -0.09
ABCF1-202ENST00000376545 COL17A1Q9UMD9 1497 aaPredicted RBP14.47□□□□□ -0.09
ABCF1-202ENST00000376545 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
ABCF1-202ENST00000376545 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
ABCF1-202ENST00000376545 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.1
ABCF1-202ENST00000376545 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
ABCF1-202ENST00000376545 INSRP06213 1382 aa14.44□□□□□ -0.1
ABCF1-202ENST00000376545 B4GALNT3Q6L9W6 998 aa14.44□□□□□ -0.1
ABCF1-202ENST00000376545 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
ABCF1-202ENST00000376545 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
ABCF1-202ENST00000376545 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
ABCF1-202ENST00000376545 PER1O15534 1290 aaPredicted RBP14.44□□□□□ -0.1
ABCF1-202ENST00000376545 PLCH2O75038 1416 aa14.44□□□□□ -0.1
ABCF1-202ENST00000376545 ABCC1P33527 1531 aa14.43□□□□□ -0.1
ABCF1-202ENST00000376545 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
ABCF1-202ENST00000376545 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
ABCF1-202ENST00000376545 TESK2Q96S53 571 aa14.41□□□□□ -0.1
ABCF1-202ENST00000376545 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
ABCF1-202ENST00000376545 NBPF1Q3BBV0 1214 aa14.4□□□□□ -0.1
ABCF1-202ENST00000376545 IQGAP1P46940 1657 aa14.4□□□□□ -0.1
ABCF1-202ENST00000376545 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
ABCF1-202ENST00000376545 CEP152O94986 1710 aa14.39□□□□□ -0.11
ABCF1-202ENST00000376545 MADDQ8WXG6 1647 aa14.39□□□□□ -0.11
ABCF1-202ENST00000376545 NLRP13Q86W25 1043 aa14.39□□□□□ -0.11
ABCF1-202ENST00000376545 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
ABCF1-202ENST00000376545 DISP3Q9P2K9 1392 aa14.38□□□□□ -0.11
ABCF1-202ENST00000376545 RTEL1-TNFRSF6BF6WH68 1400 aa14.37□□□□□ -0.11
ABCF1-202ENST00000376545 TRPM2O94759 1503 aa14.36□□□□□ -0.11
ABCF1-202ENST00000376545 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
ABCF1-202ENST00000376545 NEURL4Q96JN8 1562 aa14.35□□□□□ -0.11
ABCF1-202ENST00000376545 PDE3BQ13370 1112 aa14.35□□□□□ -0.11
ABCF1-202ENST00000376545 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
ABCF1-202ENST00000376545 PTPRTO14522 1441 aa14.34□□□□□ -0.11
ABCF1-202ENST00000376545 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
ABCF1-202ENST00000376545 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
ABCF1-202ENST00000376545 CNGB1Q14028 1251 aaPredicted RBP14.34□□□□□ -0.11
ABCF1-202ENST00000376545 RGL3Q3MIN7 710 aa14.33□□□□□ -0.11
ABCF1-202ENST00000376545 KIAA1210Q9ULL0 1709 aa14.33□□□□□ -0.12
ABCF1-202ENST00000376545 EFCAB2Q5VUJ9 269 aa14.32□□□□□ -0.12
ABCF1-202ENST00000376545 TET3O43151 1660 aa14.32□□□□□ -0.12
ABCF1-202ENST00000376545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.126e-8■■■□□ 17.8
ABCF1-202ENST00000376545 WDR7Q9Y4E6 1490 aa14.32□□□□□ -0.12
ABCF1-202ENST00000376545 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
ABCF1-202ENST00000376545 CLTCL1P53675 1640 aa14.31□□□□□ -0.12
ABCF1-202ENST00000376545 ABCA9Q8IUA7 1624 aa14.31□□□□□ -0.12
ABCF1-202ENST00000376545 INO80Q9ULG1 1556 aaPredicted RBP14.31□□□□□ -0.12
ABCF1-202ENST00000376545 RRP1P56182 461 aaKnown RBP14.3□□□□□ -0.12
ABCF1-202ENST00000376545 SYNMO15061 1565 aa14.3□□□□□ -0.12
ABCF1-202ENST00000376545 CCDC136Q96JN2 1154 aa14.3□□□□□ -0.12
ABCF1-202ENST00000376545 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
ABCF1-202ENST00000376545 TMF1P82094 1093 aa14.29□□□□□ -0.12
ABCF1-202ENST00000376545 MYOM1P52179 1685 aa14.29□□□□□ -0.12
ABCF1-202ENST00000376545 PANK3Q9H999 370 aa14.28□□□□□ -0.12
ABCF1-202ENST00000376545 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
ABCF1-202ENST00000376545 RCAN3Q9UKA8 241 aa14.27□□□□□ -0.13
ABCF1-202ENST00000376545 SCAF11Q99590 1463 aaKnown RBP14.26□□□□□ -0.13
ABCF1-202ENST00000376545 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
ABCF1-202ENST00000376545 IFT172Q9UG01 1749 aa14.25□□□□□ -0.13
ABCF1-202ENST00000376545 ATP7AQ04656 1500 aa14.25□□□□□ -0.13
ABCF1-202ENST00000376545 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
ABCF1-202ENST00000376545 SPAG9O60271 1321 aaKnown RBP14.23□□□□□ -0.13
ABCF1-202ENST00000376545 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
ABCF1-202ENST00000376545 NPC1L1Q9UHC9 1359 aa14.23□□□□□ -0.13
ABCF1-202ENST00000376545 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
ABCF1-202ENST00000376545 MAP3K4Q9Y6R4 1608 aa14.21□□□□□ -0.13
ABCF1-202ENST00000376545 MYOM2P54296 1465 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms