RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 USP35Q9P2H5 1018 aa9.45□□□□□ -0.9
CCDC93-202ENST00000376300 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
CCDC93-202ENST00000376300 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
CCDC93-202ENST00000376300 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
CCDC93-202ENST00000376300 NUTM2GQ5VZR2 741 aa9.44□□□□□ -0.9
CCDC93-202ENST00000376300 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
CCDC93-202ENST00000376300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.95e-6■■□□□ 14.2
CCDC93-202ENST00000376300 KNSTRNQ9Y448 316 aa9.43□□□□□ -0.9
CCDC93-202ENST00000376300 PSME1Q06323 249 aa9.43□□□□□ -0.9
CCDC93-202ENST00000376300 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
CCDC93-202ENST00000376300 DENND4BO75064 1496 aaPredicted RBP9.43□□□□□ -0.9
CCDC93-202ENST00000376300 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
CCDC93-202ENST00000376300 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
CCDC93-202ENST00000376300 RGS3P49796 1198 aa9.42□□□□□ -0.9
CCDC93-202ENST00000376300 XPCQ01831 940 aaPredicted RBP9.42□□□□□ -0.9
CCDC93-202ENST00000376300 NCOA2Q15596 1464 aa9.42□□□□□ -0.9
CCDC93-202ENST00000376300 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CCDC93-202ENST00000376300 ANKRD50Q9ULJ7 1429 aa9.42□□□□□ -0.9
CCDC93-202ENST00000376300 FANCAO15360 1455 aa9.41□□□□□ -0.9
CCDC93-202ENST00000376300 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
CCDC93-202ENST00000376300 ATP10BO94823 1461 aa9.41□□□□□ -0.9
CCDC93-202ENST00000376300 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
CCDC93-202ENST00000376300 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
CCDC93-202ENST00000376300 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
CCDC93-202ENST00000376300 EPRSP07814 1512 aaKnown RBP9.41□□□□□ -0.9
CCDC93-202ENST00000376300 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC93-202ENST00000376300 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC93-202ENST00000376300 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 GOLGA6L22H0YM25 854 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 IDI1Q13907 227 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 EVA1CP58658 441 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 AKNAQ7Z591 1439 aa9.4□□□□□ -0.9
CCDC93-202ENST00000376300 DMRT2Q9Y5R5 561 aa9.4□□□□□ -0.91
CCDC93-202ENST00000376300 CC2D1BQ5T0F9 858 aaKnown RBP9.4□□□□□ -0.91
CCDC93-202ENST00000376300 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 CFAP70Q5T0N1 1121 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 NUP160Q12769 1436 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 NPHP1O15259 732 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 KIF21BO75037 1637 aa9.39□□□□□ -0.91
CCDC93-202ENST00000376300 TMF1P82094 1093 aa9.38□□□□□ -0.91
CCDC93-202ENST00000376300 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
CCDC93-202ENST00000376300 SLC52A1Q9NWF4 448 aa9.38□□□□□ -0.91
CCDC93-202ENST00000376300 MSNP26038 577 aaKnown RBP9.38□□□□□ -0.91
CCDC93-202ENST00000376300 TSHZ2Q9NRE2 1034 aa9.38□□□□□ -0.91
CCDC93-202ENST00000376300 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
CCDC93-202ENST00000376300 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
CCDC93-202ENST00000376300 LRRC9Q6ZRR7 1453 aa9.36□□□□□ -0.91
CCDC93-202ENST00000376300 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-202ENST00000376300 C9orf84Q5VXU9 1444 aa9.35□□□□□ -0.91
CCDC93-202ENST00000376300 NCKAP5LQ9HCH0 1330 aa9.35□□□□□ -0.91
CCDC93-202ENST00000376300 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
CCDC93-202ENST00000376300 TEX14Q8IWB6 1497 aa9.35□□□□□ -0.91
CCDC93-202ENST00000376300 ROCK2O75116 1388 aaKnown RBP9.35□□□□□ -0.91
CCDC93-202ENST00000376300 AMPHP49418 695 aa9.35□□□□□ -0.91
CCDC93-202ENST00000376300 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
CCDC93-202ENST00000376300 HSP90AB1P08238 724 aaKnown RBP9.34□□□□□ -0.91
CCDC93-202ENST00000376300 FOXO3O43524 673 aa9.34□□□□□ -0.91
CCDC93-202ENST00000376300 CEP170Q5SW79 1584 aa9.34□□□□□ -0.92
CCDC93-202ENST00000376300 ABCC2Q92887 1545 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
CCDC93-202ENST00000376300 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 TOM1O60784 492 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 CFAP53Q96M91 514 aa9.33□□□□□ -0.92
CCDC93-202ENST00000376300 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
CCDC93-202ENST00000376300 MSH5O43196 834 aa9.32□□□□□ -0.92
CCDC93-202ENST00000376300 CUL7Q14999 1698 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 FYCO1Q9BQS8 1478 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 PRAM1Q96QH2 718 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
CCDC93-202ENST00000376300 NLRP6P59044 892 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 TERF2IPQ9NYB0 399 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 EFCAB5A4FU69 1503 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 ADAMTS12P58397 1594 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 AMOTL2Q9Y2J4 779 aa9.31□□□□□ -0.92
CCDC93-202ENST00000376300 THOC2Q8NI27 1593 aaKnown RBP9.31□□□□□ -0.92
CCDC93-202ENST00000376300 HSP90AA2PQ14568 343 aaPredicted RBP9.3□□□□□ -0.92
CCDC93-202ENST00000376300 KLHL34Q8N239 644 aa9.3□□□□□ -0.92
CCDC93-202ENST00000376300 CABP2Q9NPB3 220 aa9.3□□□□□ -0.92
CCDC93-202ENST00000376300 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
CCDC93-202ENST00000376300 PLEKHH2Q8IVE3 1493 aa9.3□□□□□ -0.92
CCDC93-202ENST00000376300 ZRSR1Q15695 479 aaKnown RBP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 L1TD1Q5T7N2 865 aaKnown RBP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
CCDC93-202ENST00000376300 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
CCDC93-202ENST00000376300 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
CCDC93-202ENST00000376300 PLCH2O75038 1416 aa9.28□□□□□ -0.92
CCDC93-202ENST00000376300 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
CCDC93-202ENST00000376300 NUDCQ9Y266 331 aa9.28□□□□□ -0.92
CCDC93-202ENST00000376300 HSPA5P11021 654 aaKnown RBP9.28□□□□□ -0.92
CCDC93-202ENST00000376300 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
CCDC93-202ENST00000376300 CHAF1AQ13111 956 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms