RNA–Protein interactions for RNA: ENST00000376238.4

SLC28A3-201, Transcript of solute carrier family 28 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A3, Length 4,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A3-201ENST00000376238 TIMELESSQ9UNS1 1208 aa7.48□□□□□ -1.21
SLC28A3-201ENST00000376238 FAM135AQ9P2D6 1515 aa7.48□□□□□ -1.21
SLC28A3-201ENST00000376238 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
SLC28A3-201ENST00000376238 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
SLC28A3-201ENST00000376238 PATL2C9JE40 543 aaKnown RBP7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 HRCP23327 699 aa7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 PKD2Q13563 968 aa7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 ZFYVE16Q7Z3T8 1539 aa7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 NUP153P49790 1475 aaKnown RBP7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 HMGB2P26583 209 aaKnown RBP7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.21
SLC28A3-201ENST00000376238 ZCCHC11Q5TAX3 1644 aaKnown RBP7.45□□□□□ -1.22
SLC28A3-201ENST00000376238 KCNA4P22459 653 aa7.45□□□□□ -1.22
SLC28A3-201ENST00000376238 CDCA8Q53HL2 280 aa7.44□□□□□ -1.22
SLC28A3-201ENST00000376238 ANP32BQ92688 251 aaKnown RBP7.44□□□□□ -1.22
SLC28A3-201ENST00000376238 PSMD1Q99460 953 aa7.44□□□□□ -1.22
SLC28A3-201ENST00000376238 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 TIAM1Q13009 1591 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 DHX29Q7Z478 1369 aaKnown RBP7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 VGFO15240 615 aaPredicted RBP7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 NEFHP12036 1026 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 FBXO3Q9UK99 471 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 KIF15Q9NS87 1388 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 CHIC2Q9UKJ5 165 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 FGD6Q6ZV73 1430 aa7.43□□□□□ -1.22
SLC28A3-201ENST00000376238 ROCK1Q13464 1354 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 PTMAP06454 111 aaKnown RBP7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 CCDC136Q96JN2 1154 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 RRP7BPQ9NSQ0 103 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 RPGRIP1LQ68CZ1 1315 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 ANP32CO43423 234 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 NEFMP07197 916 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 TNNT3P45378 269 aaPredicted RBP7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 KLHL34Q8N239 644 aa7.42□□□□□ -1.22
SLC28A3-201ENST00000376238 A2MP01023 1474 aa7.41□□□□□ -1.22
SLC28A3-201ENST00000376238 EIF3AQ14152 1382 aaKnown RBP7.41□□□□□ -1.22
SLC28A3-201ENST00000376238 MYO5CQ9NQX4 1742 aa7.41□□□□□ -1.22
SLC28A3-201ENST00000376238 MLH3Q9UHC1 1453 aa7.41□□□□□ -1.22
SLC28A3-201ENST00000376238 SHANK2Q9UPX8 1470 aa7.41□□□□□ -1.22
SLC28A3-201ENST00000376238 RAPGEF3O95398 923 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 ERBINQ96RT1 1412 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 PCF11O94913 1555 aaKnown RBP7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 ABCA9Q8IUA7 1624 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 ADCY10Q96PN6 1610 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 DIP2BQ9P265 1576 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 NUP155O75694 1391 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 AEBP1Q8IUX7 1158 aa7.4□□□□□ -1.22
SLC28A3-201ENST00000376238 CDK13Q14004 1512 aaKnown RBP7.4□□□□□ -1.23
SLC28A3-201ENST00000376238 DUOX2Q9NRD8 1548 aa7.4□□□□□ -1.23
SLC28A3-201ENST00000376238 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
SLC28A3-201ENST00000376238 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
SLC28A3-201ENST00000376238 HFM1A2PYH4 1435 aa7.39□□□□□ -1.23
SLC28A3-201ENST00000376238 AFAP1Q8N556 730 aa7.38□□□□□ -1.23
SLC28A3-201ENST00000376238 ANKRD50Q9ULJ7 1429 aa7.38□□□□□ -1.23
SLC28A3-201ENST00000376238 ANP32AP39687 249 aaKnown RBP7.38□□□□□ -1.23
SLC28A3-201ENST00000376238 TNRQ92752 1358 aa7.38□□□□□ -1.23
SLC28A3-201ENST00000376238 TAF7LQ5H9L4 462 aa7.38□□□□□ -1.23
SLC28A3-201ENST00000376238 GPATCH8Q9UKJ3 1502 aaKnown RBP7.37□□□□□ -1.23
SLC28A3-201ENST00000376238 CAMSAP2Q08AD1 1489 aa7.37□□□□□ -1.23
SLC28A3-201ENST00000376238 TONSLQ96HA7 1378 aa7.37□□□□□ -1.23
SLC28A3-201ENST00000376238 HMGB1P1B2RPK0 211 aaPredicted RBP7.37□□□□□ -1.23
SLC28A3-201ENST00000376238 TOM1O60784 492 aa7.37□□□□□ -1.23
SLC28A3-201ENST00000376238 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
SLC28A3-201ENST00000376238 TMX4Q9H1E5 349 aaPredicted RBP7.36□□□□□ -1.23
SLC28A3-201ENST00000376238 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 POGKQ9P215 609 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 NPATQ14207 1427 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 RRBP1Q9P2E9 1410 aaKnown RBP7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 ERICH6BQ5W0A0 696 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 VSIG10Q8N0Z9 540 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 ARHGEF5Q12774 1597 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 HECW2Q9P2P5 1572 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 TRAPPC8Q9Y2L5 1435 aa7.35□□□□□ -1.23
SLC28A3-201ENST00000376238 ATF3P18847 181 aa7.34□□□□□ -1.23
SLC28A3-201ENST00000376238 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
SLC28A3-201ENST00000376238 DAPK1P53355 1430 aa7.34□□□□□ -1.23
SLC28A3-201ENST00000376238 CCDC144AA2RUR9 1427 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 GOLGA6L1Q8N7Z2 621 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 AGLP35573 1532 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 ERCC6L2Q5T890 1561 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
SLC28A3-201ENST00000376238 ANKRD30BQ9BXX2 1392 aa7.32□□□□□ -1.24
SLC28A3-201ENST00000376238 WDR43Q15061 677 aaKnown RBP eCLIP7.32□□□□□ -1.24
SLC28A3-201ENST00000376238 PREX2Q70Z35 1606 aa7.32□□□□□ -1.24
SLC28A3-201ENST00000376238 LRPPRCP42704 1394 aaKnown RBP7.31□□□□□ -1.24
SLC28A3-201ENST00000376238 ZMYM4Q5VZL5 1548 aa7.31□□□□□ -1.24
SLC28A3-201ENST00000376238 ARHGEF40Q8TER5 1519 aa7.31□□□□□ -1.24
SLC28A3-201ENST00000376238 MAP3K4Q9Y6R4 1608 aa7.31□□□□□ -1.24
SLC28A3-201ENST00000376238 ABCC1P33527 1531 aa7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 PSME1Q06323 249 aa7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 PTPN23Q9H3S7 1636 aa7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 TSPOAP1O95153 1857 aa7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 TCOF1Q13428 1488 aaKnown RBP7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 RPRD2Q5VT52 1461 aaKnown RBP7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 DHX57Q6P158 1386 aaKnown RBP7.3□□□□□ -1.24
SLC28A3-201ENST00000376238 SYCP2Q9BX26 1530 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms