RNA–Protein interactions for RNA: ENST00000376238.4

SLC28A3-201, Transcript of solute carrier family 28 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A3, Length 4,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A3-201ENST00000376238 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
SLC28A3-201ENST00000376238 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
SLC28A3-201ENST00000376238 DCAF8L2P0C7V8 631 aa9.87□□□□□ -0.83
SLC28A3-201ENST00000376238 MYT1Q01538 1121 aa9.73□□□□□ -0.85
SLC28A3-201ENST00000376238 ABCC9O60706 1549 aa9.68□□□□□ -0.86
SLC28A3-201ENST00000376238 RB1CC1Q8TDY2 1594 aa9.57□□□□□ -0.88
SLC28A3-201ENST00000376238 NACADO15069 1562 aa9.53□□□□□ -0.88
SLC28A3-201ENST00000376238 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
SLC28A3-201ENST00000376238 DCAF1Q9Y4B6 1507 aa9.37□□□□□ -0.91
SLC28A3-201ENST00000376238 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
SLC28A3-201ENST00000376238 SHROOM4Q9ULL8 1493 aa9.31□□□□□ -0.92
SLC28A3-201ENST00000376238 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
SLC28A3-201ENST00000376238 ZCCHC6Q5VYS8 1495 aaKnown RBP9.28□□□□□ -0.92
SLC28A3-201ENST00000376238 RANGAP1P46060 587 aaPredicted RBP9.25□□□□□ -0.93
SLC28A3-201ENST00000376238 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
SLC28A3-201ENST00000376238 EHMT2Q96KQ7 1210 aa9.17□□□□□ -0.94
SLC28A3-201ENST00000376238 PABPN1Q86U42 306 aaKnown RBP eCLIP9.09□□□□□ -0.95
SLC28A3-201ENST00000376238 SLC24A1O60721 1099 aa9.09□□□□□ -0.95
SLC28A3-201ENST00000376238 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
SLC28A3-201ENST00000376238 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
SLC28A3-201ENST00000376238 SMARCA2P51531 1590 aa8.89□□□□□ -0.99
SLC28A3-201ENST00000376238 BAZ1AQ9NRL2 1556 aaPredicted RBP8.87□□□□□ -0.99
SLC28A3-201ENST00000376238 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
SLC28A3-201ENST00000376238 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
SLC28A3-201ENST00000376238 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
SLC28A3-201ENST00000376238 ERCC6Q03468 1493 aa8.75□□□□□ -1.01
SLC28A3-201ENST00000376238 SUPT5HO00267 1087 aaKnown RBP8.74□□□□□ -1.01
SLC28A3-201ENST00000376238 PDS5BQ9NTI5 1447 aa8.74□□□□□ -1.01
SLC28A3-201ENST00000376238 EIF4G1Q04637 1599 aaKnown RBP8.72□□□□□ -1.01
SLC28A3-201ENST00000376238 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
SLC28A3-201ENST00000376238 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
SLC28A3-201ENST00000376238 HMGXB3Q12766 1538 aa8.65□□□□□ -1.02
SLC28A3-201ENST00000376238 BICRAQ9NZM4 1560 aa8.64□□□□□ -1.03
SLC28A3-201ENST00000376238 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
SLC28A3-201ENST00000376238 CC2D2AQ9P2K1 1620 aa8.63□□□□□ -1.03
SLC28A3-201ENST00000376238 ATAD2BQ9ULI0 1458 aa8.62□□□□□ -1.03
SLC28A3-201ENST00000376238 SMARCA4P51532 1647 aa8.62□□□□□ -1.03
SLC28A3-201ENST00000376238 POLR3GLQ9BT43 218 aa8.58□□□□□ -1.04
SLC28A3-201ENST00000376238 CADPSQ9ULU8 1353 aa8.56□□□□□ -1.04
SLC28A3-201ENST00000376238 UNC13AQ9UPW8 1703 aa8.56□□□□□ -1.04
SLC28A3-201ENST00000376238 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.04
SLC28A3-201ENST00000376238 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
SLC28A3-201ENST00000376238 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
SLC28A3-201ENST00000376238 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
SLC28A3-201ENST00000376238 CEP164Q9UPV0 1460 aa8.5□□□□□ -1.05
SLC28A3-201ENST00000376238 CUX2O14529 1486 aa8.49□□□□□ -1.05
SLC28A3-201ENST00000376238 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
SLC28A3-201ENST00000376238 TRIM41Q8WV44 630 aa8.46□□□□□ -1.06
SLC28A3-201ENST00000376238 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
SLC28A3-201ENST00000376238 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
SLC28A3-201ENST00000376238 MRC2Q9UBG0 1479 aa8.43□□□□□ -1.06
SLC28A3-201ENST00000376238 APLP2Q06481 763 aa8.41□□□□□ -1.06
SLC28A3-201ENST00000376238 GLIPR1L2Q4G1C9 344 aa8.41□□□□□ -1.06
SLC28A3-201ENST00000376238 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
SLC28A3-201ENST00000376238 FANCD2Q9BXW9 1451 aa8.39□□□□□ -1.07
SLC28A3-201ENST00000376238 DNAJC5BQ9UF47 199 aa8.38□□□□□ -1.07
SLC28A3-201ENST00000376238 FBLN2P98095 1184 aa8.37□□□□□ -1.07
SLC28A3-201ENST00000376238 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
SLC28A3-201ENST00000376238 IFT140Q96RY7 1462 aa8.36□□□□□ -1.07
SLC28A3-201ENST00000376238 CFTRP13569 1480 aa8.35□□□□□ -1.07
SLC28A3-201ENST00000376238 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
SLC28A3-201ENST00000376238 EEA1Q15075 1411 aa8.34□□□□□ -1.07
SLC28A3-201ENST00000376238 OSCARQ8IYS5 282 aa8.34□□□□□ -1.07
SLC28A3-201ENST00000376238 CCDC88BA6NC98 1476 aa8.32□□□□□ -1.08
SLC28A3-201ENST00000376238 KIF27Q86VH2 1401 aa8.3□□□□□ -1.08
SLC28A3-201ENST00000376238 WIZO95785 1651 aa8.29□□□□□ -1.08
SLC28A3-201ENST00000376238 SOGA1O94964 1423 aa8.29□□□□□ -1.08
SLC28A3-201ENST00000376238 CDK11AQ9UQ88 783 aaPredicted RBP8.28□□□□□ -1.08
SLC28A3-201ENST00000376238 WDR97A6NE52 1622 aa8.26□□□□□ -1.09
SLC28A3-201ENST00000376238 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
SLC28A3-201ENST00000376238 CENPBP07199 599 aaPredicted RBP8.25□□□□□ -1.09
SLC28A3-201ENST00000376238 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
SLC28A3-201ENST00000376238 CARMIL2Q6F5E8 1435 aa8.25□□□□□ -1.09
SLC28A3-201ENST00000376238 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
SLC28A3-201ENST00000376238 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
SLC28A3-201ENST00000376238 GRIN2BQ13224 1484 aa8.21□□□□□ -1.1
SLC28A3-201ENST00000376238 HAP1P54257 671 aaPredicted RBP8.2□□□□□ -1.1
SLC28A3-201ENST00000376238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.19□□□□□ -1.1
SLC28A3-201ENST00000376238 HNRNPUL2Q1KMD3 747 aaKnown RBP8.19□□□□□ -1.1
SLC28A3-201ENST00000376238 WDR62O43379 1518 aa8.17□□□□□ -1.1
SLC28A3-201ENST00000376238 TOPBP1Q92547 1522 aa8.16□□□□□ -1.1
SLC28A3-201ENST00000376238 MAGI1Q96QZ7 1491 aaPredicted RBP8.16□□□□□ -1.1
SLC28A3-201ENST00000376238 GOLGA3Q08378 1498 aa8.16□□□□□ -1.1
SLC28A3-201ENST00000376238 CSRNP3Q8WYN3 585 aa8.16□□□□□ -1.1
SLC28A3-201ENST00000376238 GAPVD1Q14C86 1478 aa8.15□□□□□ -1.11
SLC28A3-201ENST00000376238 AMER1Q5JTC6 1135 aaPredicted RBP8.14□□□□□ -1.11
SLC28A3-201ENST00000376238 FHAD1B1AJZ9 1412 aa8.14□□□□□ -1.11
SLC28A3-201ENST00000376238 NESP48681 1621 aa8.14□□□□□ -1.11
SLC28A3-201ENST00000376238 PRDM2Q13029 1718 aa8.13□□□□□ -1.11
SLC28A3-201ENST00000376238 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
SLC28A3-201ENST00000376238 ATP1B4Q9UN42 357 aaPredicted RBP8.12□□□□□ -1.11
SLC28A3-201ENST00000376238 ACIN1Q9UKV3 1341 aaKnown RBP8.12□□□□□ -1.11
SLC28A3-201ENST00000376238 NEFLP07196 543 aa8.12□□□□□ -1.11
SLC28A3-201ENST00000376238 FGD5Q6ZNL6 1462 aa8.11□□□□□ -1.11
SLC28A3-201ENST00000376238 PODXL2Q9NZ53 605 aa8.11□□□□□ -1.11
SLC28A3-201ENST00000376238 CARMIL1Q5VZK9 1371 aa8.1□□□□□ -1.11
SLC28A3-201ENST00000376238 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
SLC28A3-201ENST00000376238 TRHP20396 242 aaPredicted RBP8.08□□□□□ -1.12
SLC28A3-201ENST00000376238 TDRD9Q8NDG6 1382 aaKnown RBP8.08□□□□□ -1.12
SLC28A3-201ENST00000376238 SYNJ2O15056 1496 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms