RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
APOA1-204ENST00000375323 KIF15Q9NS87 1388 aa23.66■■□□□ 1.38
APOA1-204ENST00000375323 PTPRKQ15262 1439 aa23.66■■□□□ 1.38
APOA1-204ENST00000375323 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
APOA1-204ENST00000375323 DUOX2Q9NRD8 1548 aa23.64■■□□□ 1.37
APOA1-204ENST00000375323 CROCC2H7BZ55 1655 aa23.63■■□□□ 1.37
APOA1-204ENST00000375323 KDM5DQ9BY66 1539 aa23.62■■□□□ 1.37
APOA1-204ENST00000375323 FBXO31Q5XUX0 539 aaPredicted RBP23.61■■□□□ 1.37
APOA1-204ENST00000375323 ANKRD30AQ9BXX3 1397 aa23.61■■□□□ 1.37
APOA1-204ENST00000375323 FAM135AQ9P2D6 1515 aa23.6■■□□□ 1.37
APOA1-204ENST00000375323 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.36
APOA1-204ENST00000375323 EIF2AK4Q9P2K8 1649 aaKnown RBP23.58■■□□□ 1.36
APOA1-204ENST00000375323 NCOA1Q15788 1441 aa23.58■■□□□ 1.36
APOA1-204ENST00000375323 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
APOA1-204ENST00000375323 PZPP20742 1482 aa23.56■■□□□ 1.36
APOA1-204ENST00000375323 MROH1Q8NDA8 1641 aa23.53■■□□□ 1.36
APOA1-204ENST00000375323 DMRT2Q9Y5R5 561 aa23.53■■□□□ 1.36
APOA1-204ENST00000375323 ADGRL2O95490 1459 aa23.53■■□□□ 1.36
APOA1-204ENST00000375323 ABCC3O15438 1527 aa23.53■■□□□ 1.36
APOA1-204ENST00000375323 TNRQ92752 1358 aa23.52■■□□□ 1.36
APOA1-204ENST00000375323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
APOA1-204ENST00000375323 STRCQ7RTU9 1775 aa23.5■■□□□ 1.35
APOA1-204ENST00000375323 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
APOA1-204ENST00000375323 A2ML1A8K2U0 1454 aa23.47■■□□□ 1.35
APOA1-204ENST00000375323 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
APOA1-204ENST00000375323 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
APOA1-204ENST00000375323 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
APOA1-204ENST00000375323 ZC3H13Q5T200 1668 aaKnown RBP23.45■■□□□ 1.34
APOA1-204ENST00000375323 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
APOA1-204ENST00000375323 KANK1Q14678 1352 aa23.45■■□□□ 1.34
APOA1-204ENST00000375323 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.34
APOA1-204ENST00000375323 NCKAP5LQ9HCH0 1330 aa23.45■■□□□ 1.34
APOA1-204ENST00000375323 ITGAEP38570 1179 aa23.45■■□□□ 1.34
APOA1-204ENST00000375323 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
APOA1-204ENST00000375323 PTPRTO14522 1441 aa23.43■■□□□ 1.34
APOA1-204ENST00000375323 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
APOA1-204ENST00000375323 CEP152O94986 1710 aa23.42■■□□□ 1.34
APOA1-204ENST00000375323 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
APOA1-204ENST00000375323 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
APOA1-204ENST00000375323 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
APOA1-204ENST00000375323 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
APOA1-204ENST00000375323 PKD2Q13563 968 aa23.4■■□□□ 1.34
APOA1-204ENST00000375323 PLA2R1Q13018 1463 aa23.4■■□□□ 1.34
APOA1-204ENST00000375323 NLRP1Q9C000 1473 aa23.4■■□□□ 1.34
APOA1-204ENST00000375323 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
APOA1-204ENST00000375323 THEMISQ8N1K5 641 aaPredicted RBP23.37■■□□□ 1.33
APOA1-204ENST00000375323 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
APOA1-204ENST00000375323 RRBP1Q9P2E9 1410 aaKnown RBP23.36■■□□□ 1.33
APOA1-204ENST00000375323 CERKQ8TCT0 537 aa23.36■■□□□ 1.33
APOA1-204ENST00000375323 LMTK2Q8IWU2 1503 aa23.35■■□□□ 1.33
APOA1-204ENST00000375323 UGGT1Q9NYU2 1555 aa23.33■■□□□ 1.33
APOA1-204ENST00000375323 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
APOA1-204ENST00000375323 CFAP65Q6ZU64 1925 aaKnown RBP23.31■■□□□ 1.32
APOA1-204ENST00000375323 ANKLE2Q86XL3 938 aa23.3■■□□□ 1.32
APOA1-204ENST00000375323 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
APOA1-204ENST00000375323 IDI1Q13907 227 aa23.24■■□□□ 1.31
APOA1-204ENST00000375323 ZNF335Q9H4Z2 1342 aaPredicted RBP23.24■■□□□ 1.31
APOA1-204ENST00000375323 NOS1P29475 1434 aa23.24■■□□□ 1.31
APOA1-204ENST00000375323 UNC13BO14795 1591 aa23.23■■□□□ 1.31
APOA1-204ENST00000375323 NUP155O75694 1391 aa23.22■■□□□ 1.31
APOA1-204ENST00000375323 LTBP4Q8N2S1 1624 aa23.22■■□□□ 1.31
APOA1-204ENST00000375323 NEURL4Q96JN8 1562 aa23.21■■□□□ 1.31
APOA1-204ENST00000375323 STAG3Q9UJ98 1225 aa23.2■■□□□ 1.3
APOA1-204ENST00000375323 RPRD2Q5VT52 1461 aaKnown RBP23.19■■□□□ 1.3
APOA1-204ENST00000375323 SYNMO15061 1565 aa23.18■■□□□ 1.3
APOA1-204ENST00000375323 NPHP4O75161 1426 aaPredicted RBP23.18■■□□□ 1.3
APOA1-204ENST00000375323 SLC52A1Q9NWF4 448 aa23.18■■□□□ 1.3
APOA1-204ENST00000375323 UBR1Q8IWV7 1749 aa23.18■■□□□ 1.3
APOA1-204ENST00000375323 TET3O43151 1660 aa23.18■■□□□ 1.3
APOA1-204ENST00000375323 MED14O60244 1454 aa23.17■■□□□ 1.3
APOA1-204ENST00000375323 NAIPQ13075 1403 aa23.17■■□□□ 1.3
APOA1-204ENST00000375323 POLR1AO95602 1720 aaPredicted RBP23.17■■□□□ 1.3
APOA1-204ENST00000375323 LTKP29376 864 aa23.17■■□□□ 1.3
APOA1-204ENST00000375323 TXNDC2Q86VQ3 553 aa23.16■■□□□ 1.3
APOA1-204ENST00000375323 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
APOA1-204ENST00000375323 ARHGAP23Q9P227 1491 aa23.15■■□□□ 1.3
APOA1-204ENST00000375323 IQGAP3Q86VI3 1631 aa23.14■■□□□ 1.29
APOA1-204ENST00000375323 SLIT1O75093 1534 aa23.13■■□□□ 1.29
APOA1-204ENST00000375323 EID1Q9Y6B2 187 aa23.13■■□□□ 1.29
APOA1-204ENST00000375323 TMEM2Q9UHN6 1383 aa23.13■■□□□ 1.29
APOA1-204ENST00000375323 GCC2Q8IWJ2 1684 aa23.12■■□□□ 1.29
APOA1-204ENST00000375323 SCAF11Q99590 1463 aaKnown RBP23.11■■□□□ 1.29
APOA1-204ENST00000375323 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
APOA1-204ENST00000375323 E9PCH4 1651 aa23.09■■□□□ 1.29
APOA1-204ENST00000375323 IQSEC2Q5JU85 1478 aa23.07■■□□□ 1.28
APOA1-204ENST00000375323 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
APOA1-204ENST00000375323 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
APOA1-204ENST00000375323 ADGRB3O60242 1522 aa23.06■■□□□ 1.28
APOA1-204ENST00000375323 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
APOA1-204ENST00000375323 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
APOA1-204ENST00000375323 CPS1P31327 1500 aa23■■□□□ 1.27
APOA1-204ENST00000375323 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
APOA1-204ENST00000375323 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
APOA1-204ENST00000375323 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
APOA1-204ENST00000375323 UBAP1LF5GYI3 381 aa22.97■■□□□ 1.27
APOA1-204ENST00000375323 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
APOA1-204ENST00000375323 ZFYVE9O95405 1425 aa22.97■■□□□ 1.27
APOA1-204ENST00000375323 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
APOA1-204ENST00000375323 BCANQ96GW7 911 aa22.95■■□□□ 1.26
APOA1-204ENST00000375323 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms