RNA–Protein interactions for RNA: ENST00000375323.5

APOA1-204, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-204ENST00000375323 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
APOA1-204ENST00000375323 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
APOA1-204ENST00000375323 ABCC9O60706 1549 aa32.99■■■□□ 2.87
APOA1-204ENST00000375323 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
APOA1-204ENST00000375323 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
APOA1-204ENST00000375323 NACADO15069 1562 aa31.47■■■□□ 2.63
APOA1-204ENST00000375323 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
APOA1-204ENST00000375323 ZCCHC6Q5VYS8 1495 aaKnown RBP31.19■■■□□ 2.58
APOA1-204ENST00000375323 DCAF1Q9Y4B6 1507 aa31■■■□□ 2.55
APOA1-204ENST00000375323 PABPN1Q86U42 306 aaKnown RBP eCLIP30.86■■■□□ 2.53
APOA1-204ENST00000375323 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
APOA1-204ENST00000375323 BICRAQ9NZM4 1560 aa30.64■■■□□ 2.5
APOA1-204ENST00000375323 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
APOA1-204ENST00000375323 SCRIBQ14160 1630 aa30.48■■■□□ 2.47
APOA1-204ENST00000375323 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
APOA1-204ENST00000375323 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
APOA1-204ENST00000375323 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
APOA1-204ENST00000375323 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
APOA1-204ENST00000375323 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
APOA1-204ENST00000375323 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
APOA1-204ENST00000375323 ATAD2BQ9ULI0 1458 aa29.08■■■□□ 2.25
APOA1-204ENST00000375323 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
APOA1-204ENST00000375323 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
APOA1-204ENST00000375323 MROH2BQ7Z745 1585 aa28.93■■■□□ 2.22
APOA1-204ENST00000375323 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
APOA1-204ENST00000375323 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
APOA1-204ENST00000375323 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
APOA1-204ENST00000375323 WIZO95785 1651 aa28.57■■■□□ 2.16
APOA1-204ENST00000375323 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
APOA1-204ENST00000375323 NESP48681 1621 aa28.49■■■□□ 2.15
APOA1-204ENST00000375323 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
APOA1-204ENST00000375323 LAMC3Q9Y6N6 1575 aa28.31■■■□□ 2.12
APOA1-204ENST00000375323 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
APOA1-204ENST00000375323 TOP2AP11388 1531 aaKnown RBP28.24■■■□□ 2.11
APOA1-204ENST00000375323 CUX2O14529 1486 aa28.19■■■□□ 2.1
APOA1-204ENST00000375323 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
APOA1-204ENST00000375323 KIF21AQ7Z4S6 1674 aa28.04■■■□□ 2.08
APOA1-204ENST00000375323 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
APOA1-204ENST00000375323 CFTRP13569 1480 aa28.02■■■□□ 2.08
APOA1-204ENST00000375323 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
APOA1-204ENST00000375323 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
APOA1-204ENST00000375323 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.05
APOA1-204ENST00000375323 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
APOA1-204ENST00000375323 WDR62O43379 1518 aa27.77■■■□□ 2.04
APOA1-204ENST00000375323 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
APOA1-204ENST00000375323 DNAJC5Q9H3Z4 198 aa27.69■■■□□ 2.02
APOA1-204ENST00000375323 URB2Q14146 1524 aaKnown RBP27.65■■■□□ 2.02
APOA1-204ENST00000375323 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
APOA1-204ENST00000375323 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
APOA1-204ENST00000375323 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
APOA1-204ENST00000375323 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
APOA1-204ENST00000375323 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
APOA1-204ENST00000375323 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
APOA1-204ENST00000375323 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
APOA1-204ENST00000375323 CUX1P39880 1505 aa27.14■■□□□ 1.94
APOA1-204ENST00000375323 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
APOA1-204ENST00000375323 SOGA1O94964 1423 aa27.11■■□□□ 1.93
APOA1-204ENST00000375323 RAD54L2Q9Y4B4 1467 aa27.11■■□□□ 1.93
APOA1-204ENST00000375323 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
APOA1-204ENST00000375323 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.921e-12■■■■■ 43.8
APOA1-204ENST00000375323 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
APOA1-204ENST00000375323 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
APOA1-204ENST00000375323 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
APOA1-204ENST00000375323 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
APOA1-204ENST00000375323 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
APOA1-204ENST00000375323 FBLN2P98095 1184 aa26.83■■□□□ 1.89
APOA1-204ENST00000375323 TOP2BQ02880 1626 aa26.81■■□□□ 1.88
APOA1-204ENST00000375323 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
APOA1-204ENST00000375323 SYNJ1O43426 1573 aa26.8■■□□□ 1.88
APOA1-204ENST00000375323 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
APOA1-204ENST00000375323 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
APOA1-204ENST00000375323 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
APOA1-204ENST00000375323 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.87
APOA1-204ENST00000375323 CHD1O14646 1710 aa26.72■■□□□ 1.87
APOA1-204ENST00000375323 MAGI1Q96QZ7 1491 aaPredicted RBP26.71■■□□□ 1.87
APOA1-204ENST00000375323 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
APOA1-204ENST00000375323 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
APOA1-204ENST00000375323 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
APOA1-204ENST00000375323 SYNJ2O15056 1496 aa26.62■■□□□ 1.85
APOA1-204ENST00000375323 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
APOA1-204ENST00000375323 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
APOA1-204ENST00000375323 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
APOA1-204ENST00000375323 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
APOA1-204ENST00000375323 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
APOA1-204ENST00000375323 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
APOA1-204ENST00000375323 ERICH3Q5RHP9 1530 aa26.46■■□□□ 1.83
APOA1-204ENST00000375323 FHAD1B1AJZ9 1412 aa26.45■■□□□ 1.82
APOA1-204ENST00000375323 GRIN2AQ12879 1464 aa26.43■■□□□ 1.82
APOA1-204ENST00000375323 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
APOA1-204ENST00000375323 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
APOA1-204ENST00000375323 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
APOA1-204ENST00000375323 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
APOA1-204ENST00000375323 NUP160Q12769 1436 aa26.33■■□□□ 1.81
APOA1-204ENST00000375323 IGF1RP08069 1367 aa26.33■■□□□ 1.8
APOA1-204ENST00000375323 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
APOA1-204ENST00000375323 CARMIL1Q5VZK9 1371 aa26.15■■□□□ 1.78
APOA1-204ENST00000375323 CUL7Q14999 1698 aa26.13■■□□□ 1.77
APOA1-204ENST00000375323 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
APOA1-204ENST00000375323 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
APOA1-204ENST00000375323 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms