RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
HDAC8-206ENST00000373571 CCDC144AA2RUR9 1427 aa22.88■■□□□ 1.25
HDAC8-206ENST00000373571 ZCCHC11Q5TAX3 1644 aaKnown RBP22.86■■□□□ 1.25
HDAC8-206ENST00000373571 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
HDAC8-206ENST00000373571 ST20-MTHFSA0A0A6YYL1 179 aa22.84■■□□□ 1.25
HDAC8-206ENST00000373571 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
HDAC8-206ENST00000373571 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
HDAC8-206ENST00000373571 TRPM1Q7Z4N2 1603 aa22.84■■□□□ 1.25
HDAC8-206ENST00000373571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
HDAC8-206ENST00000373571 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
HDAC8-206ENST00000373571 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
HDAC8-206ENST00000373571 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
HDAC8-206ENST00000373571 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
HDAC8-206ENST00000373571 PLCH2O75038 1416 aa22.82■■□□□ 1.24
HDAC8-206ENST00000373571 UHRF1BP1LA0JNW5 1464 aa22.8■■□□□ 1.24
HDAC8-206ENST00000373571 MYT1Q01538 1121 aa22.8■■□□□ 1.24
HDAC8-206ENST00000373571 ERBINQ96RT1 1412 aa22.79■■□□□ 1.24
HDAC8-206ENST00000373571 MAGI2Q86UL8 1455 aa22.78■■□□□ 1.24
HDAC8-206ENST00000373571 E9PCH4 1651 aa22.78■■□□□ 1.24
HDAC8-206ENST00000373571 ERICH6BQ5W0A0 696 aa22.78■■□□□ 1.24
HDAC8-206ENST00000373571 RGL3Q3MIN7 710 aa22.77■■□□□ 1.24
HDAC8-206ENST00000373571 ABCC1P33527 1531 aa22.77■■□□□ 1.24
HDAC8-206ENST00000373571 A2MP01023 1474 aa22.77■■□□□ 1.24
HDAC8-206ENST00000373571 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
HDAC8-206ENST00000373571 ATP10AO60312 1499 aa22.72■■□□□ 1.23
HDAC8-206ENST00000373571 LAMC1P11047 1609 aa22.71■■□□□ 1.23
HDAC8-206ENST00000373571 GPRASP1Q5JY77 1395 aa22.71■■□□□ 1.23
HDAC8-206ENST00000373571 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
HDAC8-206ENST00000373571 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.22
HDAC8-206ENST00000373571 NBPF1Q3BBV0 1214 aa22.7■■□□□ 1.22
HDAC8-206ENST00000373571 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
HDAC8-206ENST00000373571 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
HDAC8-206ENST00000373571 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
HDAC8-206ENST00000373571 PPP4R2Q9NY27 417 aa22.69■■□□□ 1.22
HDAC8-206ENST00000373571 RBM19Q9Y4C8 960 aaKnown RBP22.69■■□□□ 1.22
HDAC8-206ENST00000373571 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
HDAC8-206ENST00000373571 SMG6Q86US8 1419 aaKnown RBP22.68■■□□□ 1.22
HDAC8-206ENST00000373571 RALBP1Q15311 655 aa22.67■■□□□ 1.22
HDAC8-206ENST00000373571 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
HDAC8-206ENST00000373571 ARAP3Q8WWN8 1544 aa22.65■■□□□ 1.22
HDAC8-206ENST00000373571 BRD4O60885 1362 aaPredicted RBP22.65■■□□□ 1.22
HDAC8-206ENST00000373571 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
HDAC8-206ENST00000373571 SPAG9O60271 1321 aaKnown RBP22.63■■□□□ 1.21
HDAC8-206ENST00000373571 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
HDAC8-206ENST00000373571 ZFYVE16Q7Z3T8 1539 aa22.62■■□□□ 1.21
HDAC8-206ENST00000373571 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
HDAC8-206ENST00000373571 LRPPRCP42704 1394 aaKnown RBP22.61■■□□□ 1.21
HDAC8-206ENST00000373571 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
HDAC8-206ENST00000373571 AFAP1Q8N556 730 aa22.59■■□□□ 1.21
HDAC8-206ENST00000373571 TESK2Q96S53 571 aa22.58■■□□□ 1.21
HDAC8-206ENST00000373571 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.2
HDAC8-206ENST00000373571 DISP3Q9P2K9 1392 aa22.58■■□□□ 1.2
HDAC8-206ENST00000373571 WDR7Q9Y4E6 1490 aa22.58■■□□□ 1.2
HDAC8-206ENST00000373571 DEPDC5O75140 1603 aa22.55■■□□□ 1.2
HDAC8-206ENST00000373571 TRPM2O94759 1503 aa22.55■■□□□ 1.2
HDAC8-206ENST00000373571 ABCA9Q8IUA7 1624 aa22.55■■□□□ 1.2
HDAC8-206ENST00000373571 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
HDAC8-206ENST00000373571 PER1O15534 1290 aaPredicted RBP22.55■■□□□ 1.2
HDAC8-206ENST00000373571 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
HDAC8-206ENST00000373571 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
HDAC8-206ENST00000373571 CEP152O94986 1710 aa22.54■■□□□ 1.2
HDAC8-206ENST00000373571 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
HDAC8-206ENST00000373571 MADDQ8WXG6 1647 aa22.54■■□□□ 1.2
HDAC8-206ENST00000373571 FANCAO15360 1455 aa22.53■■□□□ 1.2
HDAC8-206ENST00000373571 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
HDAC8-206ENST00000373571 INO80Q9ULG1 1556 aaPredicted RBP22.52■■□□□ 1.2
HDAC8-206ENST00000373571 TMF1P82094 1093 aa22.52■■□□□ 1.2
HDAC8-206ENST00000373571 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.2
HDAC8-206ENST00000373571 TET3O43151 1660 aa22.51■■□□□ 1.19
HDAC8-206ENST00000373571 WASHC2CQ9Y4E1 1318 aa22.5■■□□□ 1.19
HDAC8-206ENST00000373571 CLTCL1P53675 1640 aa22.5■■□□□ 1.19
HDAC8-206ENST00000373571 PTPRTO14522 1441 aa22.49■■□□□ 1.19
HDAC8-206ENST00000373571 ANP32EQ9BTT0 268 aa22.48■■□□□ 1.19
HDAC8-206ENST00000373571 IQGAP1P46940 1657 aa22.48■■□□□ 1.19
HDAC8-206ENST00000373571 PANK3Q9H999 370 aa22.48■■□□□ 1.19
HDAC8-206ENST00000373571 ADGRL1O94910 1474 aa22.46■■□□□ 1.19
HDAC8-206ENST00000373571 KANK1Q14678 1352 aa22.46■■□□□ 1.19
HDAC8-206ENST00000373571 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
HDAC8-206ENST00000373571 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
HDAC8-206ENST00000373571 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
HDAC8-206ENST00000373571 MYT1LQ9UL68 1186 aa22.43■■□□□ 1.18
HDAC8-206ENST00000373571 STAC3Q96MF2 364 aa22.42■■□□□ 1.18
HDAC8-206ENST00000373571 KIF3BO15066 747 aa22.41■■□□□ 1.18
HDAC8-206ENST00000373571 ASXL2Q76L83 1435 aa22.4■■□□□ 1.18
HDAC8-206ENST00000373571 SCAF11Q99590 1463 aaKnown RBP22.4■■□□□ 1.18
HDAC8-206ENST00000373571 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.17
HDAC8-206ENST00000373571 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
HDAC8-206ENST00000373571 NEURL4Q96JN8 1562 aa22.36■■□□□ 1.17
HDAC8-206ENST00000373571 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
HDAC8-206ENST00000373571 KIAA1210Q9ULL0 1709 aa22.36■■□□□ 1.17
HDAC8-206ENST00000373571 INSRP06213 1382 aa22.35■■□□□ 1.17
HDAC8-206ENST00000373571 ZMYM4Q5VZL5 1548 aa22.35■■□□□ 1.17
HDAC8-206ENST00000373571 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
HDAC8-206ENST00000373571 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
HDAC8-206ENST00000373571 BLMP54132 1417 aaPredicted RBP22.34■■□□□ 1.17
HDAC8-206ENST00000373571 SYNMO15061 1565 aa22.34■■□□□ 1.17
HDAC8-206ENST00000373571 KIDINS220Q9ULH0 1771 aa22.34■■□□□ 1.17
HDAC8-206ENST00000373571 CDCA8Q53HL2 280 aa22.33■■□□□ 1.17
HDAC8-206ENST00000373571 UGGT1Q9NYU2 1555 aa22.32■■□□□ 1.16
HDAC8-206ENST00000373571 EFCAB6Q5THR3 1501 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms