RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
TSC22D3-206ENST00000372397 PLA2R1Q13018 1463 aa17.67■□□□□ 0.42
TSC22D3-206ENST00000372397 KDM5CP41229 1560 aa17.67■□□□□ 0.42
TSC22D3-206ENST00000372397 BCORL1Q5H9F3 1711 aa17.66■□□□□ 0.42
TSC22D3-206ENST00000372397 MAGI2Q86UL8 1455 aa17.65■□□□□ 0.42
TSC22D3-206ENST00000372397 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
TSC22D3-206ENST00000372397 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
TSC22D3-206ENST00000372397 FANCAO15360 1455 aa17.63■□□□□ 0.41
TSC22D3-206ENST00000372397 RTEL1-TNFRSF6BF6WH68 1400 aa17.63■□□□□ 0.41
TSC22D3-206ENST00000372397 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
TSC22D3-206ENST00000372397 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
TSC22D3-206ENST00000372397 PRKRIP1Q9H875 184 aaPredicted RBP17.62■□□□□ 0.41
TSC22D3-206ENST00000372397 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
TSC22D3-206ENST00000372397 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
TSC22D3-206ENST00000372397 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
TSC22D3-206ENST00000372397 ATP10AO60312 1499 aa17.58■□□□□ 0.4
TSC22D3-206ENST00000372397 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
TSC22D3-206ENST00000372397 CCDC184Q52MB2 194 aa17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 ARID4BQ4LE39 1312 aaPredicted RBP17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 ADGRL1O94910 1474 aa17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
TSC22D3-206ENST00000372397 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
TSC22D3-206ENST00000372397 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
TSC22D3-206ENST00000372397 A2MP01023 1474 aa17.56■□□□□ 0.4
TSC22D3-206ENST00000372397 TRPM1Q7Z4N2 1603 aa17.56■□□□□ 0.4
TSC22D3-206ENST00000372397 INO80Q9ULG1 1556 aaPredicted RBP17.55■□□□□ 0.4
TSC22D3-206ENST00000372397 MYT1LQ9UL68 1186 aa17.55■□□□□ 0.4
TSC22D3-206ENST00000372397 E9PCH4 1651 aa17.54■□□□□ 0.4
TSC22D3-206ENST00000372397 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSC22D3-206ENST00000372397 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
TSC22D3-206ENST00000372397 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
TSC22D3-206ENST00000372397 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.39
TSC22D3-206ENST00000372397 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
TSC22D3-206ENST00000372397 KIF3BO15066 747 aa17.49■□□□□ 0.39
TSC22D3-206ENST00000372397 KANK1Q14678 1352 aa17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 TET3O43151 1660 aa17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 SPHKAPQ2M3C7 1700 aa17.47■□□□□ 0.39
TSC22D3-206ENST00000372397 KIDINS220Q9ULH0 1771 aa17.46■□□□□ 0.39
TSC22D3-206ENST00000372397 EIF2AK4Q9P2K8 1649 aaKnown RBP17.46■□□□□ 0.39
TSC22D3-206ENST00000372397 CD109Q6YHK3 1445 aa17.46■□□□□ 0.39
TSC22D3-206ENST00000372397 TRPM2O94759 1503 aa17.46■□□□□ 0.38
TSC22D3-206ENST00000372397 PTPRTO14522 1441 aa17.45■□□□□ 0.38
TSC22D3-206ENST00000372397 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
TSC22D3-206ENST00000372397 LAMC1P11047 1609 aa17.45■□□□□ 0.38
TSC22D3-206ENST00000372397 FKBP8Q14318 412 aa17.45■□□□□ 0.38
TSC22D3-206ENST00000372397 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
TSC22D3-206ENST00000372397 CEP152O94986 1710 aa17.43■□□□□ 0.38
TSC22D3-206ENST00000372397 PRDM15P57071 1507 aaPredicted RBP17.43■□□□□ 0.38
TSC22D3-206ENST00000372397 CLTCL1P53675 1640 aa17.42■□□□□ 0.38
TSC22D3-206ENST00000372397 MROH1Q8NDA8 1641 aa17.42■□□□□ 0.38
TSC22D3-206ENST00000372397 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
TSC22D3-206ENST00000372397 NEFLP07196 543 aa17.4■□□□□ 0.38
TSC22D3-206ENST00000372397 TESK2Q96S53 571 aa17.38■□□□□ 0.37
TSC22D3-206ENST00000372397 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
TSC22D3-206ENST00000372397 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TSC22D3-206ENST00000372397 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
TSC22D3-206ENST00000372397 BCANQ96GW7 911 aa17.37■□□□□ 0.37
TSC22D3-206ENST00000372397 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
TSC22D3-206ENST00000372397 COL17A1Q9UMD9 1497 aaPredicted RBP17.35■□□□□ 0.37
TSC22D3-206ENST00000372397 DISP3Q9P2K9 1392 aa17.35■□□□□ 0.37
TSC22D3-206ENST00000372397 MLH3Q9UHC1 1453 aa17.35■□□□□ 0.37
TSC22D3-206ENST00000372397 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
TSC22D3-206ENST00000372397 ZBED9Q6R2W3 1325 aa17.33■□□□□ 0.37
TSC22D3-206ENST00000372397 PPRC1Q5VV67 1664 aaKnown RBP17.33■□□□□ 0.36
TSC22D3-206ENST00000372397 HECW2Q9P2P5 1572 aa17.33■□□□□ 0.36
TSC22D3-206ENST00000372397 UGGT1Q9NYU2 1555 aa17.32■□□□□ 0.36
TSC22D3-206ENST00000372397 TMF1P82094 1093 aa17.32■□□□□ 0.36
TSC22D3-206ENST00000372397 RALBP1Q15311 655 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 FRMPD1Q5SYB0 1578 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 KIF1BO60333 1816 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 NEO1Q92859 1461 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
TSC22D3-206ENST00000372397 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 GGT6Q6P531 493 aa17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
TSC22D3-206ENST00000372397 CYB5RLQ6IPT4 315 aa17.29■□□□□ 0.36
TSC22D3-206ENST00000372397 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
TSC22D3-206ENST00000372397 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
TSC22D3-206ENST00000372397 PANK3Q9H999 370 aa17.26■□□□□ 0.35
TSC22D3-206ENST00000372397 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-206ENST00000372397 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
TSC22D3-206ENST00000372397 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
TSC22D3-206ENST00000372397 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
TSC22D3-206ENST00000372397 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
TSC22D3-206ENST00000372397 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
TSC22D3-206ENST00000372397 ADGRF5Q8IZF2 1346 aa17.24■□□□□ 0.35
TSC22D3-206ENST00000372397 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
TSC22D3-206ENST00000372397 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
TSC22D3-206ENST00000372397 NPATQ14207 1427 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms