RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 SHROOM2Q13796 1616 aa18.77■□□□□ 0.59
RNF220-204ENST00000372247 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
RNF220-204ENST00000372247 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
RNF220-204ENST00000372247 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
RNF220-204ENST00000372247 PRDM15P57071 1507 aaPredicted RBP18.76■□□□□ 0.59
RNF220-204ENST00000372247 PRAG1Q86YV5 1406 aa18.75■□□□□ 0.59
RNF220-204ENST00000372247 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
RNF220-204ENST00000372247 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
RNF220-204ENST00000372247 RALBP1Q15311 655 aa18.73■□□□□ 0.59
RNF220-204ENST00000372247 RNF17Q9BXT8 1623 aaKnown RBP18.73■□□□□ 0.59
RNF220-204ENST00000372247 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
RNF220-204ENST00000372247 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
RNF220-204ENST00000372247 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
RNF220-204ENST00000372247 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
RNF220-204ENST00000372247 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
RNF220-204ENST00000372247 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
RNF220-204ENST00000372247 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
RNF220-204ENST00000372247 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
RNF220-204ENST00000372247 PLEKHH2Q8IVE3 1493 aa18.68■□□□□ 0.58
RNF220-204ENST00000372247 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
RNF220-204ENST00000372247 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
RNF220-204ENST00000372247 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
RNF220-204ENST00000372247 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
RNF220-204ENST00000372247 A2MP01023 1474 aa18.66■□□□□ 0.58
RNF220-204ENST00000372247 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
RNF220-204ENST00000372247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.65■□□□□ 0.58
RNF220-204ENST00000372247 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
RNF220-204ENST00000372247 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.57
RNF220-204ENST00000372247 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
RNF220-204ENST00000372247 BLMP54132 1417 aaPredicted RBP18.63■□□□□ 0.57
RNF220-204ENST00000372247 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
RNF220-204ENST00000372247 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
RNF220-204ENST00000372247 CCDC144AA2RUR9 1427 aa18.62■□□□□ 0.57
RNF220-204ENST00000372247 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
RNF220-204ENST00000372247 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
RNF220-204ENST00000372247 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
RNF220-204ENST00000372247 ABCC2Q92887 1545 aa18.6■□□□□ 0.57
RNF220-204ENST00000372247 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
RNF220-204ENST00000372247 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
RNF220-204ENST00000372247 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
RNF220-204ENST00000372247 CHD1O14646 1710 aa18.56■□□□□ 0.56
RNF220-204ENST00000372247 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■■■■□ 22.9
RNF220-204ENST00000372247 ARAP3Q8WWN8 1544 aa18.56■□□□□ 0.56
RNF220-204ENST00000372247 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
RNF220-204ENST00000372247 TESK2Q96S53 571 aa18.55■□□□□ 0.56
RNF220-204ENST00000372247 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
RNF220-204ENST00000372247 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
RNF220-204ENST00000372247 DEPDC5O75140 1603 aa18.54■□□□□ 0.56
RNF220-204ENST00000372247 ZNF326Q5BKZ1 582 aaKnown RBP18.53■□□□□ 0.56
RNF220-204ENST00000372247 UHRF1BP1LA0JNW5 1464 aa18.53■□□□□ 0.56
RNF220-204ENST00000372247 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
RNF220-204ENST00000372247 ABCC1P33527 1531 aa18.53■□□□□ 0.56
RNF220-204ENST00000372247 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
RNF220-204ENST00000372247 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.56
RNF220-204ENST00000372247 BCL11AQ9H165 835 aa18.52■□□□□ 0.55
RNF220-204ENST00000372247 CEP152O94986 1710 aa18.51■□□□□ 0.55
RNF220-204ENST00000372247 KIAA1210Q9ULL0 1709 aa18.51■□□□□ 0.55
RNF220-204ENST00000372247 CCDC136Q96JN2 1154 aa18.51■□□□□ 0.55
RNF220-204ENST00000372247 TRPM2O94759 1503 aa18.5■□□□□ 0.55
RNF220-204ENST00000372247 SYNMO15061 1565 aa18.49■□□□□ 0.55
RNF220-204ENST00000372247 PLCH2O75038 1416 aa18.49■□□□□ 0.55
RNF220-204ENST00000372247 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
RNF220-204ENST00000372247 DISP3Q9P2K9 1392 aa18.48■□□□□ 0.55
RNF220-204ENST00000372247 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
RNF220-204ENST00000372247 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
RNF220-204ENST00000372247 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
RNF220-204ENST00000372247 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
RNF220-204ENST00000372247 VWDEQ8N2E2 1590 aa18.47■□□□□ 0.55
RNF220-204ENST00000372247 PTPRTO14522 1441 aa18.47■□□□□ 0.55
RNF220-204ENST00000372247 WDR7Q9Y4E6 1490 aa18.47■□□□□ 0.55
RNF220-204ENST00000372247 FBLN2P98095 1184 aa18.46■□□□□ 0.55
RNF220-204ENST00000372247 ZCCHC11Q5TAX3 1644 aaKnown RBP18.45■□□□□ 0.54
RNF220-204ENST00000372247 RCAN3Q9UKA8 241 aa18.44■□□□□ 0.54
RNF220-204ENST00000372247 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
RNF220-204ENST00000372247 NPC1L1Q9UHC9 1359 aa18.44■□□□□ 0.54
RNF220-204ENST00000372247 MYOM1P52179 1685 aa18.44■□□□□ 0.54
RNF220-204ENST00000372247 MS4A1P11836 297 aa18.44■□□□□ 0.54
RNF220-204ENST00000372247 IPO9Q96P70 1041 aaKnown RBP18.44■□□□□ 0.54
RNF220-204ENST00000372247 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
RNF220-204ENST00000372247 NBPF1Q3BBV0 1214 aa18.43■□□□□ 0.54
RNF220-204ENST00000372247 TET3O43151 1660 aa18.43■□□□□ 0.54
RNF220-204ENST00000372247 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
RNF220-204ENST00000372247 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
RNF220-204ENST00000372247 PIK3C2GO75747 1445 aa18.38■□□□□ 0.53
RNF220-204ENST00000372247 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
RNF220-204ENST00000372247 TMF1P82094 1093 aa18.38■□□□□ 0.53
RNF220-204ENST00000372247 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
RNF220-204ENST00000372247 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
RNF220-204ENST00000372247 SCAF11Q99590 1463 aaKnown RBP18.37■□□□□ 0.53
RNF220-204ENST00000372247 ANP32AP39687 249 aaKnown RBP18.36■□□□□ 0.53
RNF220-204ENST00000372247 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
RNF220-204ENST00000372247 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
RNF220-204ENST00000372247 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
RNF220-204ENST00000372247 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
RNF220-204ENST00000372247 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
RNF220-204ENST00000372247 ABCA9Q8IUA7 1624 aa18.35■□□□□ 0.53
RNF220-204ENST00000372247 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
RNF220-204ENST00000372247 MYOM2P54296 1465 aa18.34■□□□□ 0.53
RNF220-204ENST00000372247 PANK3Q9H999 370 aa18.33■□□□□ 0.52
RNF220-204ENST00000372247 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms