RNA–Protein interactions for RNA: ENST00000371600.7

NPDC1-201, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPDC1, Length 2,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-201ENST00000371600 TTC37Q6PGP7 1564 aa34.31■■■■□ 3.08
NPDC1-201ENST00000371600 ZCCHC11Q5TAX3 1644 aaKnown RBP34.28■■■■□ 3.08
NPDC1-201ENST00000371600 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
NPDC1-201ENST00000371600 CCDC144AA2RUR9 1427 aa34.27■■■■□ 3.08
NPDC1-201ENST00000371600 UNC13BO14795 1591 aa34.26■■■■□ 3.08
NPDC1-201ENST00000371600 ST20-MTHFSA0A0A6YYL1 179 aa34.26■■■■□ 3.07
NPDC1-201ENST00000371600 IRX6P78412 446 aaPredicted RBP34.25■■■■□ 3.07
NPDC1-201ENST00000371600 RBM19Q9Y4C8 960 aaKnown RBP34.23■■■■□ 3.07
NPDC1-201ENST00000371600 PLXNC1O60486 1568 aa34.22■■■■□ 3.07
NPDC1-201ENST00000371600 PPP4R2Q9NY27 417 aa34.22■■■■□ 3.07
NPDC1-201ENST00000371600 MYO5CQ9NQX4 1742 aa34.2■■■■□ 3.07
NPDC1-201ENST00000371600 PRAG1Q86YV5 1406 aa34.19■■■■□ 3.06
NPDC1-201ENST00000371600 KTN1Q86UP2 1357 aaKnown RBP34.19■■■■□ 3.06
NPDC1-201ENST00000371600 PLA2R1Q13018 1463 aa34.16■■■■□ 3.06
NPDC1-201ENST00000371600 DUOX2Q9NRD8 1548 aa34.15■■■■□ 3.06
NPDC1-201ENST00000371600 SMG6Q86US8 1419 aaKnown RBP34.14■■■■□ 3.06
NPDC1-201ENST00000371600 IQGAP3Q86VI3 1631 aa34.14■■■■□ 3.06
NPDC1-201ENST00000371600 PLCH2O75038 1416 aa34.13■■■■□ 3.05
NPDC1-201ENST00000371600 PNISRQ8TF01 805 aaKnown RBP34.13■■■■□ 3.05
NPDC1-201ENST00000371600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.12■■■■□ 3.05
NPDC1-201ENST00000371600 RALBP1Q15311 655 aa34.12■■■■□ 3.05
NPDC1-201ENST00000371600 TMC1Q8TDI8 760 aa34.12■■■■□ 3.05
NPDC1-201ENST00000371600 TRPM1Q7Z4N2 1603 aa34.11■■■■□ 3.05
NPDC1-201ENST00000371600 ERBINQ96RT1 1412 aa34.11■■■■□ 3.05
NPDC1-201ENST00000371600 CNGB1Q14028 1251 aaPredicted RBP34.11■■■■□ 3.05
NPDC1-201ENST00000371600 GPRASP1Q5JY77 1395 aa34.1■■■■□ 3.05
NPDC1-201ENST00000371600 ATP10AO60312 1499 aa34.09■■■■□ 3.05
NPDC1-201ENST00000371600 EFCAB2Q5VUJ9 269 aa34.09■■■■□ 3.05
NPDC1-201ENST00000371600 MAGI2Q86UL8 1455 aa34.08■■■■□ 3.05
NPDC1-201ENST00000371600 RGL3Q3MIN7 710 aa34.06■■■■□ 3.04
NPDC1-201ENST00000371600 A2MP01023 1474 aa34.06■■■■□ 3.04
NPDC1-201ENST00000371600 BRD4O60885 1362 aaPredicted RBP34.06■■■■□ 3.04
NPDC1-201ENST00000371600 MYBBP1AQ9BQG0 1328 aaKnown RBP34.06■■■■□ 3.04
NPDC1-201ENST00000371600 NUDCQ9Y266 331 aa34.05■■■■□ 3.04
NPDC1-201ENST00000371600 E9PCH4 1651 aa34.04■■■■□ 3.04
NPDC1-201ENST00000371600 LAMC1P11047 1609 aa34.02■■■■□ 3.04
NPDC1-201ENST00000371600 ANP32EQ9BTT0 268 aa34.01■■■■□ 3.04
NPDC1-201ENST00000371600 LRPPRCP42704 1394 aaKnown RBP34■■■■□ 3.03
NPDC1-201ENST00000371600 NBPF1Q3BBV0 1214 aa33.99■■■■□ 3.03
NPDC1-201ENST00000371600 ABCC1P33527 1531 aa33.97■■■■□ 3.03
NPDC1-201ENST00000371600 EIF2AK4Q9P2K8 1649 aaKnown RBP33.97■■■■□ 3.03
NPDC1-201ENST00000371600 PRDM15P57071 1507 aaPredicted RBP33.95■■■■□ 3.03
NPDC1-201ENST00000371600 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
NPDC1-201ENST00000371600 RNF123Q5XPI4 1314 aa33.95■■■■□ 3.03
NPDC1-201ENST00000371600 COL17A1Q9UMD9 1497 aaPredicted RBP33.91■■■■□ 3.02
NPDC1-201ENST00000371600 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
NPDC1-201ENST00000371600 WASHC2CQ9Y4E1 1318 aa33.91■■■■□ 3.02
NPDC1-201ENST00000371600 PARD3Q8TEW0 1356 aa33.9■■■■□ 3.02
NPDC1-201ENST00000371600 RTEL1-TNFRSF6BF6WH68 1400 aa33.89■■■■□ 3.02
NPDC1-201ENST00000371600 ARAP3Q8WWN8 1544 aa33.89■■■■□ 3.02
NPDC1-201ENST00000371600 NLRP13Q86W25 1043 aa33.89■■■■□ 3.02
NPDC1-201ENST00000371600 TESK2Q96S53 571 aa33.89■■■■□ 3.02
NPDC1-201ENST00000371600 PER1O15534 1290 aaPredicted RBP33.88■■■■□ 3.01
NPDC1-201ENST00000371600 B4GALNT3Q6L9W6 998 aa33.88■■■■□ 3.01
NPDC1-201ENST00000371600 WDR7Q9Y4E6 1490 aa33.87■■■■□ 3.01
NPDC1-201ENST00000371600 SPAG9O60271 1321 aaKnown RBP33.85■■■■□ 3.01
NPDC1-201ENST00000371600 FANCIQ9NVI1 1328 aa33.83■■■■□ 3.01
NPDC1-201ENST00000371600 TMF1P82094 1093 aa33.82■■■■□ 3
NPDC1-201ENST00000371600 DISP3Q9P2K9 1392 aa33.8■■■■□ 3
NPDC1-201ENST00000371600 STAC3Q96MF2 364 aa33.79■■■■□ 3
NPDC1-201ENST00000371600 ABCA9Q8IUA7 1624 aa33.75■■■□□ 2.99
NPDC1-201ENST00000371600 RNF17Q9BXT8 1623 aaKnown RBP33.75■■■□□ 2.99
NPDC1-201ENST00000371600 ZFYVE16Q7Z3T8 1539 aa33.75■■■□□ 2.99
NPDC1-201ENST00000371600 AFAP1Q8N556 730 aa33.75■■■□□ 2.99
NPDC1-201ENST00000371600 ASXL2Q76L83 1435 aa33.75■■■□□ 2.99
NPDC1-201ENST00000371600 PTPRTO14522 1441 aa33.72■■■□□ 2.99
NPDC1-201ENST00000371600 TRPM2O94759 1503 aa33.72■■■□□ 2.99
NPDC1-201ENST00000371600 INSRP06213 1382 aa33.72■■■□□ 2.99
NPDC1-201ENST00000371600 PANK3Q9H999 370 aa33.71■■■□□ 2.99
NPDC1-201ENST00000371600 PDE3BQ13370 1112 aa33.7■■■□□ 2.99
NPDC1-201ENST00000371600 DEPDC5O75140 1603 aa33.67■■■□□ 2.98
NPDC1-201ENST00000371600 ZMYM4Q5VZL5 1548 aa33.66■■■□□ 2.98
NPDC1-201ENST00000371600 MADDQ8WXG6 1647 aa33.65■■■□□ 2.98
NPDC1-201ENST00000371600 SENP3-EIF4A1A0A087X0R7 540 aa33.65■■■□□ 2.98
NPDC1-201ENST00000371600 KANK1Q14678 1352 aa33.64■■■□□ 2.98
NPDC1-201ENST00000371600 CC2D1BQ5T0F9 858 aaKnown RBP33.64■■■□□ 2.98
NPDC1-201ENST00000371600 CCDC136Q96JN2 1154 aa33.64■■■□□ 2.98
NPDC1-201ENST00000371600 FANCAO15360 1455 aa33.63■■■□□ 2.97
NPDC1-201ENST00000371600 SCAPERQ9BY12 1400 aa33.62■■■□□ 2.97
NPDC1-201ENST00000371600 MSH5O43196 834 aa33.61■■■□□ 2.97
NPDC1-201ENST00000371600 SPHKAPQ2M3C7 1700 aa33.61■■■□□ 2.97
NPDC1-201ENST00000371600 ATP7AQ04656 1500 aa33.6■■■□□ 2.97
NPDC1-201ENST00000371600 CEP152O94986 1710 aa33.6■■■□□ 2.97
NPDC1-201ENST00000371600 TET3O43151 1660 aa33.6■■■□□ 2.97
NPDC1-201ENST00000371600 CDCA8Q53HL2 280 aa33.59■■■□□ 2.97
NPDC1-201ENST00000371600 INO80Q9ULG1 1556 aaPredicted RBP33.58■■■□□ 2.97
NPDC1-201ENST00000371600 VWDEQ8N2E2 1590 aa33.58■■■□□ 2.97
NPDC1-201ENST00000371600 IQGAP1P46940 1657 aa33.57■■■□□ 2.97
NPDC1-201ENST00000371600 SCAF11Q99590 1463 aaKnown RBP33.57■■■□□ 2.96
NPDC1-201ENST00000371600 CLTCL1P53675 1640 aa33.55■■■□□ 2.96
NPDC1-201ENST00000371600 RRP1P56182 461 aaKnown RBP33.55■■■□□ 2.96
NPDC1-201ENST00000371600 BLMP54132 1417 aaPredicted RBP33.55■■■□□ 2.96
NPDC1-201ENST00000371600 RCAN3Q9UKA8 241 aa33.54■■■□□ 2.96
NPDC1-201ENST00000371600 NEURL4Q96JN8 1562 aa33.54■■■□□ 2.96
NPDC1-201ENST00000371600 NPM1P06748 294 aaKnown RBP eCLIP33.52■■■□□ 2.96
NPDC1-201ENST00000371600 ADGRL1O94910 1474 aa33.51■■■□□ 2.95
NPDC1-201ENST00000371600 KIF3BO15066 747 aa33.51■■■□□ 2.95
NPDC1-201ENST00000371600 KNSTRNQ9Y448 316 aa33.5■■■□□ 2.95
NPDC1-201ENST00000371600 SALL2Q9Y467 1007 aaPredicted RBP33.48■■■□□ 2.95
NPDC1-201ENST00000371600 EIF3AQ14152 1382 aaKnown RBP33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms