RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 CEBPAP49715 358 aaPredicted RBP22.49■■□□□ 1.19
MRPL55-218ENST00000366747 KDM5DQ9BY66 1539 aa22.48■■□□□ 1.19
MRPL55-218ENST00000366747 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
MRPL55-218ENST00000366747 RNF17Q9BXT8 1623 aaKnown RBP22.48■■□□□ 1.19
MRPL55-218ENST00000366747 NCOA1Q15788 1441 aa22.47■■□□□ 1.19
MRPL55-218ENST00000366747 UHRF1BP1Q6BDS2 1440 aa22.47■■□□□ 1.19
MRPL55-218ENST00000366747 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
MRPL55-218ENST00000366747 SETD1BQ9UPS6 1966 aaKnown RBP22.45■■□□□ 1.18
MRPL55-218ENST00000366747 CLTCQ00610 1675 aaKnown RBP22.45■■□□□ 1.18
MRPL55-218ENST00000366747 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
MRPL55-218ENST00000366747 WASHC2CQ9Y4E1 1318 aa22.43■■□□□ 1.18
MRPL55-218ENST00000366747 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
MRPL55-218ENST00000366747 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
MRPL55-218ENST00000366747 ROCK1Q13464 1354 aa22.4■■□□□ 1.18
MRPL55-218ENST00000366747 ZC3H13Q5T200 1668 aaKnown RBP22.4■■□□□ 1.18
MRPL55-218ENST00000366747 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
MRPL55-218ENST00000366747 PZPP20742 1482 aa22.4■■□□□ 1.18
MRPL55-218ENST00000366747 PRDM15P57071 1507 aaPredicted RBP22.38■■□□□ 1.17
MRPL55-218ENST00000366747 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
MRPL55-218ENST00000366747 MROH1Q8NDA8 1641 aa22.37■■□□□ 1.17
MRPL55-218ENST00000366747 ABCC3O15438 1527 aa22.36■■□□□ 1.17
MRPL55-218ENST00000366747 KANK1Q14678 1352 aa22.35■■□□□ 1.17
MRPL55-218ENST00000366747 DEPDC5O75140 1603 aa22.35■■□□□ 1.17
MRPL55-218ENST00000366747 ANKRD50Q9ULJ7 1429 aa22.34■■□□□ 1.17
MRPL55-218ENST00000366747 HSPA2P54652 639 aa22.33■■□□□ 1.17
MRPL55-218ENST00000366747 ARHGAP31Q2M1Z3 1444 aa22.31■■□□□ 1.16
MRPL55-218ENST00000366747 TNRQ92752 1358 aa22.29■■□□□ 1.16
MRPL55-218ENST00000366747 MYO3AQ8NEV4 1616 aa22.28■■□□□ 1.16
MRPL55-218ENST00000366747 LMTK2Q8IWU2 1503 aa22.28■■□□□ 1.16
MRPL55-218ENST00000366747 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
MRPL55-218ENST00000366747 VWDEQ8N2E2 1590 aa22.27■■□□□ 1.16
MRPL55-218ENST00000366747 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
MRPL55-218ENST00000366747 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
MRPL55-218ENST00000366747 A2ML1A8K2U0 1454 aa22.26■■□□□ 1.15
MRPL55-218ENST00000366747 NLRP1Q9C000 1473 aa22.26■■□□□ 1.15
MRPL55-218ENST00000366747 SPATA31D1Q6ZQQ2 1576 aa22.25■■□□□ 1.15
MRPL55-218ENST00000366747 CAMSAP1Q5T5Y3 1602 aa22.25■■□□□ 1.15
MRPL55-218ENST00000366747 FBXO31Q5XUX0 539 aaPredicted RBP22.24■■□□□ 1.15
MRPL55-218ENST00000366747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
MRPL55-218ENST00000366747 ERVK-7P63135 1459 aa22.23■■□□□ 1.15
MRPL55-218ENST00000366747 PLA2R1Q13018 1463 aa22.23■■□□□ 1.15
MRPL55-218ENST00000366747 ITGAEP38570 1179 aa22.22■■□□□ 1.15
MRPL55-218ENST00000366747 CEP152O94986 1710 aa22.22■■□□□ 1.15
MRPL55-218ENST00000366747 UNC13BO14795 1591 aa22.19■■□□□ 1.14
MRPL55-218ENST00000366747 RPRD2Q5VT52 1461 aaKnown RBP22.18■■□□□ 1.14
MRPL55-218ENST00000366747 PTPRTO14522 1441 aa22.18■■□□□ 1.14
MRPL55-218ENST00000366747 EFCAB6Q5THR3 1501 aa22.17■■□□□ 1.14
MRPL55-218ENST00000366747 PKD2Q13563 968 aa22.17■■□□□ 1.14
MRPL55-218ENST00000366747 THEMISQ8N1K5 641 aaPredicted RBP22.14■■□□□ 1.13
MRPL55-218ENST00000366747 STRCQ7RTU9 1775 aa22.14■■□□□ 1.13
MRPL55-218ENST00000366747 UGGT1Q9NYU2 1555 aa22.13■■□□□ 1.13
MRPL55-218ENST00000366747 HFM1A2PYH4 1435 aa22.12■■□□□ 1.13
MRPL55-218ENST00000366747 TET3O43151 1660 aa22.11■■□□□ 1.13
MRPL55-218ENST00000366747 NOS1P29475 1434 aa22.11■■□□□ 1.13
MRPL55-218ENST00000366747 NAIPQ13075 1403 aa22.11■■□□□ 1.13
MRPL55-218ENST00000366747 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
MRPL55-218ENST00000366747 NUP155O75694 1391 aa22.08■■□□□ 1.12
MRPL55-218ENST00000366747 GCC2Q8IWJ2 1684 aa22.07■■□□□ 1.12
MRPL55-218ENST00000366747 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
MRPL55-218ENST00000366747 ANKLE2Q86XL3 938 aa22.05■■□□□ 1.12
MRPL55-218ENST00000366747 KDM5AP29375 1690 aaKnown RBP22.03■■□□□ 1.12
MRPL55-218ENST00000366747 NCKAP5LQ9HCH0 1330 aa22.03■■□□□ 1.12
MRPL55-218ENST00000366747 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
MRPL55-218ENST00000366747 SYNMO15061 1565 aa22.01■■□□□ 1.11
MRPL55-218ENST00000366747 MED14O60244 1454 aa22■■□□□ 1.11
MRPL55-218ENST00000366747 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
MRPL55-218ENST00000366747 IDI1Q13907 227 aa21.99■■□□□ 1.11
MRPL55-218ENST00000366747 SLIT1O75093 1534 aa21.99■■□□□ 1.11
MRPL55-218ENST00000366747 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
MRPL55-218ENST00000366747 POLR1AO95602 1720 aaPredicted RBP21.98■■□□□ 1.11
MRPL55-218ENST00000366747 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
MRPL55-218ENST00000366747 PIK3C2BO00750 1634 aa21.97■■□□□ 1.11
MRPL55-218ENST00000366747 CFAP65Q6ZU64 1925 aaKnown RBP21.96■■□□□ 1.11
MRPL55-218ENST00000366747 NEURL4Q96JN8 1562 aa21.96■■□□□ 1.11
MRPL55-218ENST00000366747 E9PCH4 1651 aa21.96■■□□□ 1.11
MRPL55-218ENST00000366747 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
MRPL55-218ENST00000366747 TMEM2Q9UHN6 1383 aa21.95■■□□□ 1.1
MRPL55-218ENST00000366747 NPHP4O75161 1426 aaPredicted RBP21.95■■□□□ 1.1
MRPL55-218ENST00000366747 SCAF11Q99590 1463 aaKnown RBP21.95■■□□□ 1.1
MRPL55-218ENST00000366747 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
MRPL55-218ENST00000366747 CERKQ8TCT0 537 aa21.92■■□□□ 1.1
MRPL55-218ENST00000366747 LTBP4Q8N2S1 1624 aa21.9■■□□□ 1.1
MRPL55-218ENST00000366747 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
MRPL55-218ENST00000366747 TXNDC2Q86VQ3 553 aa21.89■■□□□ 1.09
MRPL55-218ENST00000366747 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
MRPL55-218ENST00000366747 HDGFP51858 240 aaKnown RBP21.88■■□□□ 1.09
MRPL55-218ENST00000366747 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
MRPL55-218ENST00000366747 IQGAP1P46940 1657 aa21.87■■□□□ 1.09
MRPL55-218ENST00000366747 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
MRPL55-218ENST00000366747 LTKP29376 864 aa21.85■■□□□ 1.09
MRPL55-218ENST00000366747 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
MRPL55-218ENST00000366747 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
MRPL55-218ENST00000366747 ZNF335Q9H4Z2 1342 aaPredicted RBP21.84■■□□□ 1.09
MRPL55-218ENST00000366747 TRPM2O94759 1503 aa21.84■■□□□ 1.09
MRPL55-218ENST00000366747 SPHKAPQ2M3C7 1700 aa21.83■■□□□ 1.09
MRPL55-218ENST00000366747 CPS1P31327 1500 aa21.83■■□□□ 1.09
MRPL55-218ENST00000366747 ZFYVE9O95405 1425 aa21.82■■□□□ 1.08
MRPL55-218ENST00000366747 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.82■■□□□ 1.08
MRPL55-218ENST00000366747 ILDR1Q86SU0 546 aaPredicted RBP21.81■■□□□ 1.08
MRPL55-218ENST00000366747 RIMS2Q9UQ26 1411 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms