RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ZNF777Q9ULD5 760 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-202ENST00000366216 IQGAP1P46940 1657 aa17.77■□□□□ 0.44
CSNK1E-202ENST00000366216 DEPDC5O75140 1603 aa17.77■□□□□ 0.44
CSNK1E-202ENST00000366216 RNF17Q9BXT8 1623 aaKnown RBP17.76■□□□□ 0.43
CSNK1E-202ENST00000366216 GGT6Q6P531 493 aa17.76■□□□□ 0.43
CSNK1E-202ENST00000366216 PLEKHH2Q8IVE3 1493 aa17.74■□□□□ 0.43
CSNK1E-202ENST00000366216 SYNMO15061 1565 aa17.74■□□□□ 0.43
CSNK1E-202ENST00000366216 KIAA1107Q9UPP5 1409 aa17.72■□□□□ 0.43
CSNK1E-202ENST00000366216 XIRP1Q702N8 1843 aaKnown RBP17.71■□□□□ 0.43
CSNK1E-202ENST00000366216 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.43
CSNK1E-202ENST00000366216 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
CSNK1E-202ENST00000366216 MED14O60244 1454 aa17.69■□□□□ 0.42
CSNK1E-202ENST00000366216 TNRQ92752 1358 aa17.69■□□□□ 0.42
CSNK1E-202ENST00000366216 PZPP20742 1482 aa17.69■□□□□ 0.42
CSNK1E-202ENST00000366216 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
CSNK1E-202ENST00000366216 ANKLE2Q86XL3 938 aa17.68■□□□□ 0.42
CSNK1E-202ENST00000366216 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
CSNK1E-202ENST00000366216 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 UGGT1Q9NYU2 1555 aa17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 NPHP4O75161 1426 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 ZC3H13Q5T200 1668 aaKnown RBP17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
CSNK1E-202ENST00000366216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.428e-8■■■■□ 24.8
CSNK1E-202ENST00000366216 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
CSNK1E-202ENST00000366216 MBD5Q9P267 1494 aa17.66■□□□□ 0.42
CSNK1E-202ENST00000366216 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
CSNK1E-202ENST00000366216 CFDP1Q9UEE9 299 aaPredicted RBP17.64■□□□□ 0.41
CSNK1E-202ENST00000366216 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-202ENST00000366216 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
CSNK1E-202ENST00000366216 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
CSNK1E-202ENST00000366216 TIAM1Q13009 1591 aa17.61■□□□□ 0.41
CSNK1E-202ENST00000366216 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
CSNK1E-202ENST00000366216 UBR1Q8IWV7 1749 aa17.59■□□□□ 0.41
CSNK1E-202ENST00000366216 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
CSNK1E-202ENST00000366216 MIA2Q96PC5 1412 aa17.59■□□□□ 0.41
CSNK1E-202ENST00000366216 WASHC2CQ9Y4E1 1318 aa17.55■□□□□ 0.4
CSNK1E-202ENST00000366216 KIF3BO15066 747 aa17.55■□□□□ 0.4
CSNK1E-202ENST00000366216 ADRA2BP18089 450 aa17.55■□□□□ 0.4
CSNK1E-202ENST00000366216 CEP152O94986 1710 aa17.52■□□□□ 0.4
CSNK1E-202ENST00000366216 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.4
CSNK1E-202ENST00000366216 POTEAQ6S8J7 498 aa17.52■□□□□ 0.4
CSNK1E-202ENST00000366216 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
CSNK1E-202ENST00000366216 CCDC141Q6ZP82 1450 aa17.49■□□□□ 0.39
CSNK1E-202ENST00000366216 ABCC3O15438 1527 aa17.47■□□□□ 0.39
CSNK1E-202ENST00000366216 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
CSNK1E-202ENST00000366216 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-202ENST00000366216 PHLPP1O60346 1717 aa17.46■□□□□ 0.39
CSNK1E-202ENST00000366216 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
CSNK1E-202ENST00000366216 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
CSNK1E-202ENST00000366216 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
CSNK1E-202ENST00000366216 CAMSAP2Q08AD1 1489 aa17.44■□□□□ 0.38
CSNK1E-202ENST00000366216 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
CSNK1E-202ENST00000366216 MROH1Q8NDA8 1641 aa17.43■□□□□ 0.38
CSNK1E-202ENST00000366216 SLIT1O75093 1534 aa17.43■□□□□ 0.38
CSNK1E-202ENST00000366216 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
CSNK1E-202ENST00000366216 LTKP29376 864 aa17.42■□□□□ 0.38
CSNK1E-202ENST00000366216 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
CSNK1E-202ENST00000366216 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
CSNK1E-202ENST00000366216 PIK3C2BO00750 1634 aa17.39■□□□□ 0.37
CSNK1E-202ENST00000366216 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
CSNK1E-202ENST00000366216 MAP3K1Q13233 1512 aa17.37■□□□□ 0.37
CSNK1E-202ENST00000366216 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
CSNK1E-202ENST00000366216 LRRC9Q6ZRR7 1453 aa17.37■□□□□ 0.37
CSNK1E-202ENST00000366216 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
CSNK1E-202ENST00000366216 TXNDC2Q86VQ3 553 aa17.35■□□□□ 0.37
CSNK1E-202ENST00000366216 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
CSNK1E-202ENST00000366216 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
CSNK1E-202ENST00000366216 EID1Q9Y6B2 187 aa17.32■□□□□ 0.36
CSNK1E-202ENST00000366216 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
CSNK1E-202ENST00000366216 TRIM26Q12899 539 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-202ENST00000366216 RBM33Q96EV2 1170 aaKnown RBP17.31■□□□□ 0.36
CSNK1E-202ENST00000366216 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
CSNK1E-202ENST00000366216 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
CSNK1E-202ENST00000366216 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
CSNK1E-202ENST00000366216 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
CSNK1E-202ENST00000366216 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-202ENST00000366216 TET3O43151 1660 aa17.29■□□□□ 0.36
CSNK1E-202ENST00000366216 JCADQ9P266 1359 aa17.29■□□□□ 0.36
CSNK1E-202ENST00000366216 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
CSNK1E-202ENST00000366216 MYO5BQ9ULV0 1848 aa17.28■□□□□ 0.36
CSNK1E-202ENST00000366216 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-202ENST00000366216 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
CSNK1E-202ENST00000366216 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
CSNK1E-202ENST00000366216 KCNA6P17658 529 aa17.26■□□□□ 0.35
CSNK1E-202ENST00000366216 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-202ENST00000366216 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
CSNK1E-202ENST00000366216 LRP6O75581 1613 aa17.25■□□□□ 0.35
CSNK1E-202ENST00000366216 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
CSNK1E-202ENST00000366216 DUOX2Q9NRD8 1548 aa17.25■□□□□ 0.35
CSNK1E-202ENST00000366216 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
CSNK1E-202ENST00000366216 MSH6P52701 1360 aa17.24■□□□□ 0.35
CSNK1E-202ENST00000366216 PCGF6Q9BYE7 350 aa17.23■□□□□ 0.35
CSNK1E-202ENST00000366216 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-202ENST00000366216 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
CSNK1E-202ENST00000366216 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
CSNK1E-202ENST00000366216 APLP2Q06481 763 aa17.21■□□□□ 0.35
CSNK1E-202ENST00000366216 SLC26A8Q96RN1 970 aa17.2■□□□□ 0.34
CSNK1E-202ENST00000366216 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms