RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
APP-206ENST00000359726 KIAA0586Q9BVV6 1533 aa9.88□□□□□ -0.83
APP-206ENST00000359726 POGKQ9P215 609 aa9.88□□□□□ -0.83
APP-206ENST00000359726 ADGRL2O95490 1459 aa9.88□□□□□ -0.83
APP-206ENST00000359726 SHROOM2Q13796 1616 aa9.88□□□□□ -0.83
APP-206ENST00000359726 CLCN1P35523 988 aa9.87□□□□□ -0.83
APP-206ENST00000359726 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
APP-206ENST00000359726 TOPBP1Q92547 1522 aa9.87□□□□□ -0.83
APP-206ENST00000359726 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
APP-206ENST00000359726 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
APP-206ENST00000359726 CDCA7LQ96GN5 454 aa9.87□□□□□ -0.83
APP-206ENST00000359726 RRP9O43818 475 aaKnown RBP9.87□□□□□ -0.83
APP-206ENST00000359726 RALBP1Q15311 655 aa9.87□□□□□ -0.83
APP-206ENST00000359726 C20orf194Q5TEA3 1177 aa9.87□□□□□ -0.83
APP-206ENST00000359726 KIAA1107Q9UPP5 1409 aa9.86□□□□□ -0.83
APP-206ENST00000359726 CDK13Q14004 1512 aaKnown RBP9.86□□□□□ -0.83
APP-206ENST00000359726 SENP3-EIF4A1A0A087X0R7 540 aa9.85□□□□□ -0.83
APP-206ENST00000359726 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
APP-206ENST00000359726 PLIN1O60240 522 aa9.85□□□□□ -0.83
APP-206ENST00000359726 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
APP-206ENST00000359726 CENPQQ7L2Z9 268 aaPredicted RBP9.85□□□□□ -0.83
APP-206ENST00000359726 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
APP-206ENST00000359726 ABCC10Q5T3U5 1492 aa9.84□□□□□ -0.83
APP-206ENST00000359726 PLXNC1O60486 1568 aa9.84□□□□□ -0.83
APP-206ENST00000359726 CENPJQ9HC77 1338 aaPredicted RBP9.84□□□□□ -0.83
APP-206ENST00000359726 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
APP-206ENST00000359726 MYO5CQ9NQX4 1742 aa9.84□□□□□ -0.83
APP-206ENST00000359726 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
APP-206ENST00000359726 PRDM15P57071 1507 aaPredicted RBP9.83□□□□□ -0.84
APP-206ENST00000359726 CDC42BPAQ5VT25 1732 aa9.83□□□□□ -0.84
APP-206ENST00000359726 XRCC6P12956 609 aaKnown RBP eCLIP9.83□□□□□ -0.84
APP-206ENST00000359726 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
APP-206ENST00000359726 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
APP-206ENST00000359726 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
APP-206ENST00000359726 COL17A1Q9UMD9 1497 aaPredicted RBP9.82□□□□□ -0.84
APP-206ENST00000359726 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
APP-206ENST00000359726 CCDC144AA2RUR9 1427 aa9.81□□□□□ -0.84
APP-206ENST00000359726 VSIG10Q8N0Z9 540 aa9.81□□□□□ -0.84
APP-206ENST00000359726 FANCD2Q9BXW9 1451 aa9.81□□□□□ -0.84
APP-206ENST00000359726 EIF3AQ14152 1382 aaKnown RBP9.81□□□□□ -0.84
APP-206ENST00000359726 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
APP-206ENST00000359726 MYOM1P52179 1685 aa9.8□□□□□ -0.84
APP-206ENST00000359726 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
APP-206ENST00000359726 GLIPR1L2Q4G1C9 344 aa9.8□□□□□ -0.84
APP-206ENST00000359726 PRDM4Q9UKN5 801 aa9.8□□□□□ -0.84
APP-206ENST00000359726 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
APP-206ENST00000359726 PBRM1Q86U86 1689 aa9.79□□□□□ -0.84
APP-206ENST00000359726 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
APP-206ENST00000359726 PLEKHH1Q9ULM0 1364 aa9.79□□□□□ -0.84
APP-206ENST00000359726 PTPRGP23470 1445 aa9.79□□□□□ -0.84
APP-206ENST00000359726 L1TD1Q5T7N2 865 aaKnown RBP9.79□□□□□ -0.84
APP-206ENST00000359726 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
APP-206ENST00000359726 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
APP-206ENST00000359726 SEC24BO95487 1268 aa9.78□□□□□ -0.84
APP-206ENST00000359726 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
APP-206ENST00000359726 GPRASP1Q5JY77 1395 aa9.77□□□□□ -0.85
APP-206ENST00000359726 HSP90AA2PQ14568 343 aaPredicted RBP9.77□□□□□ -0.85
APP-206ENST00000359726 IQGAP2Q13576 1575 aa9.77□□□□□ -0.85
APP-206ENST00000359726 TARBP1Q13395 1621 aaKnown RBP9.77□□□□□ -0.85
APP-206ENST00000359726 PANK2Q9BZ23 570 aa9.77□□□□□ -0.85
APP-206ENST00000359726 NCOA3Q9Y6Q9 1424 aa9.76□□□□□ -0.85
APP-206ENST00000359726 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
APP-206ENST00000359726 URB2Q14146 1524 aaKnown RBP9.75□□□□□ -0.85
APP-206ENST00000359726 PRAG1Q86YV5 1406 aa9.74□□□□□ -0.85
APP-206ENST00000359726 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
APP-206ENST00000359726 SCAPERQ9BY12 1400 aa9.74□□□□□ -0.85
APP-206ENST00000359726 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
APP-206ENST00000359726 DDIT3P35638 169 aa9.73□□□□□ -0.85
APP-206ENST00000359726 NUP153P49790 1475 aaKnown RBP9.73□□□□□ -0.85
APP-206ENST00000359726 ST20-MTHFSA0A0A6YYL1 179 aa9.73□□□□□ -0.85
APP-206ENST00000359726 RAPGEF6Q8TEU7 1601 aa9.73□□□□□ -0.85
APP-206ENST00000359726 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
APP-206ENST00000359726 SHANK2Q9UPX8 1470 aa9.73□□□□□ -0.85
APP-206ENST00000359726 ADAMTS12P58397 1594 aa9.72□□□□□ -0.85
APP-206ENST00000359726 WDR7Q9Y4E6 1490 aa9.72□□□□□ -0.85
APP-206ENST00000359726 PNNQ9H307 717 aaKnown RBP9.72□□□□□ -0.85
APP-206ENST00000359726 IGHDP01880 384 aa9.72□□□□□ -0.85
APP-206ENST00000359726 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
APP-206ENST00000359726 KIAA0556O60303 1618 aa9.72□□□□□ -0.85
APP-206ENST00000359726 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
APP-206ENST00000359726 FAM135AQ9P2D6 1515 aa9.71□□□□□ -0.85
APP-206ENST00000359726 ZNF644Q9H582 1327 aaPredicted RBP9.71□□□□□ -0.85
APP-206ENST00000359726 SYNMO15061 1565 aa9.71□□□□□ -0.86
APP-206ENST00000359726 MAGI2Q86UL8 1455 aa9.71□□□□□ -0.86
APP-206ENST00000359726 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
APP-206ENST00000359726 DISP3Q9P2K9 1392 aa9.71□□□□□ -0.86
APP-206ENST00000359726 TBC1D32Q96NH3 1257 aa9.71□□□□□ -0.86
APP-206ENST00000359726 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
APP-206ENST00000359726 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
APP-206ENST00000359726 TESK2Q96S53 571 aa9.7□□□□□ -0.86
APP-206ENST00000359726 EIF2AK4Q9P2K8 1649 aaKnown RBP9.7□□□□□ -0.86
APP-206ENST00000359726 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
APP-206ENST00000359726 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
APP-206ENST00000359726 MCM4P33991 863 aa9.69□□□□□ -0.86
APP-206ENST00000359726 NAP1L5Q96NT1 182 aaPredicted RBP9.69□□□□□ -0.86
APP-206ENST00000359726 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
APP-206ENST00000359726 GPATCH8Q9UKJ3 1502 aaKnown RBP9.69□□□□□ -0.86
APP-206ENST00000359726 NKTRP30414 1462 aaKnown RBP9.69□□□□□ -0.86
APP-206ENST00000359726 UNC13BO14795 1591 aa9.69□□□□□ -0.86
APP-206ENST00000359726 GOLGA6L3A6NEY3 463 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms