RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
FAM3D-201ENST00000358781 RNF17Q9BXT8 1623 aaKnown RBP26.21■■□□□ 1.79
FAM3D-201ENST00000358781 FAM135AQ9P2D6 1515 aa26.2■■□□□ 1.79
FAM3D-201ENST00000358781 CHIC2Q9UKJ5 165 aa26.2■■□□□ 1.79
FAM3D-201ENST00000358781 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.78
FAM3D-201ENST00000358781 KDM5DQ9BY66 1539 aa26.18■■□□□ 1.78
FAM3D-201ENST00000358781 ERBINQ96RT1 1412 aa26.17■■□□□ 1.78
FAM3D-201ENST00000358781 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
FAM3D-201ENST00000358781 NPATQ14207 1427 aa26.17■■□□□ 1.78
FAM3D-201ENST00000358781 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
FAM3D-201ENST00000358781 UHRF1BP1Q6BDS2 1440 aa26.15■■□□□ 1.78
FAM3D-201ENST00000358781 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.78
FAM3D-201ENST00000358781 MROH1Q8NDA8 1641 aa26.13■■□□□ 1.77
FAM3D-201ENST00000358781 PTPRKQ15262 1439 aa26.13■■□□□ 1.77
FAM3D-201ENST00000358781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
FAM3D-201ENST00000358781 HSPA2P54652 639 aa26.13■■□□□ 1.77
FAM3D-201ENST00000358781 ZC3H13Q5T200 1668 aaKnown RBP26.09■■□□□ 1.77
FAM3D-201ENST00000358781 ABCC3O15438 1527 aa26.08■■□□□ 1.77
FAM3D-201ENST00000358781 RRBP1Q9P2E9 1410 aaKnown RBP26.07■■□□□ 1.76
FAM3D-201ENST00000358781 PZPP20742 1482 aa26.07■■□□□ 1.76
FAM3D-201ENST00000358781 PRDM15P57071 1507 aaPredicted RBP26.07■■□□□ 1.76
FAM3D-201ENST00000358781 DEPDC5O75140 1603 aa26.06■■□□□ 1.76
FAM3D-201ENST00000358781 ROCK1Q13464 1354 aa26.04■■□□□ 1.76
FAM3D-201ENST00000358781 CEP152O94986 1710 aa26.03■■□□□ 1.76
FAM3D-201ENST00000358781 MYO3AQ8NEV4 1616 aa26.02■■□□□ 1.76
FAM3D-201ENST00000358781 ITGAEP38570 1179 aa26.01■■□□□ 1.75
FAM3D-201ENST00000358781 FBXO31Q5XUX0 539 aaPredicted RBP26.01■■□□□ 1.75
FAM3D-201ENST00000358781 ANKRD50Q9ULJ7 1429 aa26.01■■□□□ 1.75
FAM3D-201ENST00000358781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26■■□□□ 1.75
FAM3D-201ENST00000358781 CAMSAP1Q5T5Y3 1602 aa25.99■■□□□ 1.75
FAM3D-201ENST00000358781 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
FAM3D-201ENST00000358781 KANK1Q14678 1352 aa25.97■■□□□ 1.75
FAM3D-201ENST00000358781 TNRQ92752 1358 aa25.97■■□□□ 1.75
FAM3D-201ENST00000358781 VWDEQ8N2E2 1590 aa25.96■■□□□ 1.75
FAM3D-201ENST00000358781 CEP170BQ9Y4F5 1589 aaPredicted RBP25.96■■□□□ 1.75
FAM3D-201ENST00000358781 STRCQ7RTU9 1775 aa25.94■■□□□ 1.74
FAM3D-201ENST00000358781 ARHGAP31Q2M1Z3 1444 aa25.92■■□□□ 1.74
FAM3D-201ENST00000358781 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
FAM3D-201ENST00000358781 A2ML1A8K2U0 1454 aa25.92■■□□□ 1.74
FAM3D-201ENST00000358781 SPATA31D1Q6ZQQ2 1576 aa25.92■■□□□ 1.74
FAM3D-201ENST00000358781 ERVK-7P63135 1459 aa25.91■■□□□ 1.74
FAM3D-201ENST00000358781 CFAP65Q6ZU64 1925 aaKnown RBP25.91■■□□□ 1.74
FAM3D-201ENST00000358781 NLRP1Q9C000 1473 aa25.88■■□□□ 1.73
FAM3D-201ENST00000358781 UNC13BO14795 1591 aa25.87■■□□□ 1.73
FAM3D-201ENST00000358781 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
FAM3D-201ENST00000358781 PLA2R1Q13018 1463 aa25.84■■□□□ 1.73
FAM3D-201ENST00000358781 EFCAB6Q5THR3 1501 aa25.83■■□□□ 1.73
FAM3D-201ENST00000358781 PTPRTO14522 1441 aa25.79■■□□□ 1.72
FAM3D-201ENST00000358781 UGGT1Q9NYU2 1555 aa25.79■■□□□ 1.72
FAM3D-201ENST00000358781 TET3O43151 1660 aa25.79■■□□□ 1.72
FAM3D-201ENST00000358781 NCKAP5LQ9HCH0 1330 aa25.78■■□□□ 1.72
FAM3D-201ENST00000358781 NAIPQ13075 1403 aa25.78■■□□□ 1.72
FAM3D-201ENST00000358781 IQGAP3Q86VI3 1631 aa25.77■■□□□ 1.72
FAM3D-201ENST00000358781 GCC2Q8IWJ2 1684 aa25.77■■□□□ 1.72
FAM3D-201ENST00000358781 PKD2Q13563 968 aa25.76■■□□□ 1.71
FAM3D-201ENST00000358781 THEMISQ8N1K5 641 aaPredicted RBP25.76■■□□□ 1.71
FAM3D-201ENST00000358781 RPRD2Q5VT52 1461 aaKnown RBP25.75■■□□□ 1.71
FAM3D-201ENST00000358781 NUP155O75694 1391 aa25.74■■□□□ 1.71
FAM3D-201ENST00000358781 HFM1A2PYH4 1435 aa25.73■■□□□ 1.71
FAM3D-201ENST00000358781 NOS1P29475 1434 aa25.73■■□□□ 1.71
FAM3D-201ENST00000358781 SYNMO15061 1565 aa25.72■■□□□ 1.71
FAM3D-201ENST00000358781 UBR1Q8IWV7 1749 aa25.71■■□□□ 1.71
FAM3D-201ENST00000358781 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
FAM3D-201ENST00000358781 E9PCH4 1651 aa25.69■■□□□ 1.7
FAM3D-201ENST00000358781 PIK3C2BO00750 1634 aa25.68■■□□□ 1.7
FAM3D-201ENST00000358781 ANKLE2Q86XL3 938 aa25.67■■□□□ 1.7
FAM3D-201ENST00000358781 NEURL4Q96JN8 1562 aa25.66■■□□□ 1.7
FAM3D-201ENST00000358781 IDI1Q13907 227 aa25.65■■□□□ 1.7
FAM3D-201ENST00000358781 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.69
FAM3D-201ENST00000358781 SLC52A1Q9NWF4 448 aa25.63■■□□□ 1.69
FAM3D-201ENST00000358781 SLIT1O75093 1534 aa25.61■■□□□ 1.69
FAM3D-201ENST00000358781 STAG3Q9UJ98 1225 aa25.61■■□□□ 1.69
FAM3D-201ENST00000358781 MED14O60244 1454 aa25.6■■□□□ 1.69
FAM3D-201ENST00000358781 ARHGAP23Q9P227 1491 aa25.6■■□□□ 1.69
FAM3D-201ENST00000358781 ADGRB3O60242 1522 aa25.58■■□□□ 1.69
FAM3D-201ENST00000358781 CERKQ8TCT0 537 aa25.58■■□□□ 1.69
FAM3D-201ENST00000358781 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
FAM3D-201ENST00000358781 TMEM2Q9UHN6 1383 aa25.56■■□□□ 1.68
FAM3D-201ENST00000358781 SCAF11Q99590 1463 aaKnown RBP25.56■■□□□ 1.68
FAM3D-201ENST00000358781 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
FAM3D-201ENST00000358781 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
FAM3D-201ENST00000358781 IQGAP1P46940 1657 aa25.55■■□□□ 1.68
FAM3D-201ENST00000358781 LTKP29376 864 aa25.53■■□□□ 1.68
FAM3D-201ENST00000358781 TXNDC2Q86VQ3 553 aa25.53■■□□□ 1.68
FAM3D-201ENST00000358781 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
FAM3D-201ENST00000358781 SPHKAPQ2M3C7 1700 aa25.52■■□□□ 1.68
FAM3D-201ENST00000358781 EID1Q9Y6B2 187 aa25.52■■□□□ 1.68
FAM3D-201ENST00000358781 MYO5BQ9ULV0 1848 aa25.51■■□□□ 1.67
FAM3D-201ENST00000358781 ILDR1Q86SU0 546 aaPredicted RBP25.51■■□□□ 1.67
FAM3D-201ENST00000358781 TMEM131LA2VDJ0 1609 aa25.5■■□□□ 1.67
FAM3D-201ENST00000358781 FBXO41Q8TF61 875 aa25.49■■□□□ 1.67
FAM3D-201ENST00000358781 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
FAM3D-201ENST00000358781 SETD5Q9C0A6 1442 aa25.47■■□□□ 1.67
FAM3D-201ENST00000358781 CHGAP10645 457 aaKnown RBP25.44■■□□□ 1.66
FAM3D-201ENST00000358781 ZFYVE9O95405 1425 aa25.43■■□□□ 1.66
FAM3D-201ENST00000358781 TRPM2O94759 1503 aa25.43■■□□□ 1.66
FAM3D-201ENST00000358781 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
FAM3D-201ENST00000358781 RIMS2Q9UQ26 1411 aa25.41■■□□□ 1.66
FAM3D-201ENST00000358781 IQSEC2Q5JU85 1478 aa25.4■■□□□ 1.66
FAM3D-201ENST00000358781 CLTCL1P53675 1640 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms