RNA–Protein interactions for RNA: ENST00000358356.9

RUNX1-203, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1, Length 2,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-203ENST00000358356 RALGAPBQ86X10 1494 aa22.97■■□□□ 1.27
RUNX1-203ENST00000358356 UHRF1BP1Q6BDS2 1440 aa22.96■■□□□ 1.27
RUNX1-203ENST00000358356 MYBBP1AQ9BQG0 1328 aaKnown RBP22.95■■□□□ 1.26
RUNX1-203ENST00000358356 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
RUNX1-203ENST00000358356 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
RUNX1-203ENST00000358356 NBPF1Q3BBV0 1214 aa22.93■■□□□ 1.26
RUNX1-203ENST00000358356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.93■■□□□ 1.262e-6■■□□□ 11.6
RUNX1-203ENST00000358356 CROCC2H7BZ55 1655 aa22.92■■□□□ 1.26
RUNX1-203ENST00000358356 RALBP1Q15311 655 aa22.9■■□□□ 1.26
RUNX1-203ENST00000358356 EXOC6Q8TAG9 804 aa22.9■■□□□ 1.26
RUNX1-203ENST00000358356 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.25
RUNX1-203ENST00000358356 BRD4O60885 1362 aaPredicted RBP22.88■■□□□ 1.25
RUNX1-203ENST00000358356 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
RUNX1-203ENST00000358356 RRP1P56182 461 aaKnown RBP22.87■■□□□ 1.25
RUNX1-203ENST00000358356 ANP32AP39687 249 aaKnown RBP22.86■■□□□ 1.25
RUNX1-203ENST00000358356 CDCA7LQ96GN5 454 aa22.86■■□□□ 1.25
RUNX1-203ENST00000358356 RCAN3Q9UKA8 241 aa22.85■■□□□ 1.25
RUNX1-203ENST00000358356 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
RUNX1-203ENST00000358356 ARHGEF12Q9NZN5 1544 aa22.84■■□□□ 1.25
RUNX1-203ENST00000358356 NPM2Q86SE8 214 aaKnown RBP22.83■■□□□ 1.25
RUNX1-203ENST00000358356 NLRP13Q86W25 1043 aa22.83■■□□□ 1.24
RUNX1-203ENST00000358356 SHANK2Q9UPX8 1470 aa22.82■■□□□ 1.24
RUNX1-203ENST00000358356 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
RUNX1-203ENST00000358356 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
RUNX1-203ENST00000358356 CDC42BPBQ9Y5S2 1711 aa22.8■■□□□ 1.24
RUNX1-203ENST00000358356 PLIN1O60240 522 aa22.8■■□□□ 1.24
RUNX1-203ENST00000358356 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
RUNX1-203ENST00000358356 PER1O15534 1290 aaPredicted RBP22.79■■□□□ 1.24
RUNX1-203ENST00000358356 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
RUNX1-203ENST00000358356 SAMD9LQ8IVG5 1584 aa22.77■■□□□ 1.24
RUNX1-203ENST00000358356 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
RUNX1-203ENST00000358356 PRAG1Q86YV5 1406 aa22.76■■□□□ 1.23
RUNX1-203ENST00000358356 FAM135AQ9P2D6 1515 aa22.76■■□□□ 1.23
RUNX1-203ENST00000358356 PANK3Q9H999 370 aa22.76■■□□□ 1.23
RUNX1-203ENST00000358356 PARD3Q8TEW0 1356 aa22.75■■□□□ 1.23
RUNX1-203ENST00000358356 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
RUNX1-203ENST00000358356 SKAP1Q86WV1 359 aa22.74■■□□□ 1.23
RUNX1-203ENST00000358356 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
RUNX1-203ENST00000358356 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
RUNX1-203ENST00000358356 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
RUNX1-203ENST00000358356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.233e-6■□□□□ 10
RUNX1-203ENST00000358356 SYCP2Q9BX26 1530 aa22.72■■□□□ 1.23
RUNX1-203ENST00000358356 TESK2Q96S53 571 aa22.72■■□□□ 1.23
RUNX1-203ENST00000358356 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
RUNX1-203ENST00000358356 PLA2R1Q13018 1463 aa22.7■■□□□ 1.22
RUNX1-203ENST00000358356 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
RUNX1-203ENST00000358356 PDE3BQ13370 1112 aa22.67■■□□□ 1.22
RUNX1-203ENST00000358356 A2MP01023 1474 aa22.67■■□□□ 1.22
RUNX1-203ENST00000358356 PDE4AP27815 886 aa22.67■■□□□ 1.22
RUNX1-203ENST00000358356 PREX2Q70Z35 1606 aa22.67■■□□□ 1.22
RUNX1-203ENST00000358356 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
RUNX1-203ENST00000358356 E9PCH4 1651 aa22.66■■□□□ 1.22
RUNX1-203ENST00000358356 ARHGEF5Q12774 1597 aa22.65■■□□□ 1.22
RUNX1-203ENST00000358356 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
RUNX1-203ENST00000358356 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
RUNX1-203ENST00000358356 CRBNQ96SW2 442 aa22.64■■□□□ 1.22
RUNX1-203ENST00000358356 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
RUNX1-203ENST00000358356 TMF1P82094 1093 aa22.63■■□□□ 1.21
RUNX1-203ENST00000358356 TRPM1Q7Z4N2 1603 aa22.63■■□□□ 1.21
RUNX1-203ENST00000358356 RTL5Q5HYW3 569 aaPredicted RBP22.62■■□□□ 1.21
RUNX1-203ENST00000358356 ADAMTS8Q9UP79 889 aa22.62■■□□□ 1.21
RUNX1-203ENST00000358356 ERBINQ96RT1 1412 aa22.61■■□□□ 1.21
RUNX1-203ENST00000358356 C20orf194Q5TEA3 1177 aa22.61■■□□□ 1.21
RUNX1-203ENST00000358356 COL17A1Q9UMD9 1497 aaPredicted RBP22.6■■□□□ 1.21
RUNX1-203ENST00000358356 GPRASP1Q5JY77 1395 aa22.6■■□□□ 1.21
RUNX1-203ENST00000358356 AFAP1Q8N556 730 aa22.6■■□□□ 1.21
RUNX1-203ENST00000358356 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
RUNX1-203ENST00000358356 BACH2Q9BYV9 841 aa22.59■■□□□ 1.21
RUNX1-203ENST00000358356 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
RUNX1-203ENST00000358356 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
RUNX1-203ENST00000358356 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
RUNX1-203ENST00000358356 TRAPPC8Q9Y2L5 1435 aa22.54■■□□□ 1.2
RUNX1-203ENST00000358356 MYO5CQ9NQX4 1742 aa22.54■■□□□ 1.2
RUNX1-203ENST00000358356 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
RUNX1-203ENST00000358356 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
RUNX1-203ENST00000358356 BLMP54132 1417 aaPredicted RBP22.52■■□□□ 1.2
RUNX1-203ENST00000358356 PRDM15P57071 1507 aaPredicted RBP22.52■■□□□ 1.2
RUNX1-203ENST00000358356 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
RUNX1-203ENST00000358356 PLCH2O75038 1416 aa22.5■■□□□ 1.19
RUNX1-203ENST00000358356 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
RUNX1-203ENST00000358356 MS4A1P11836 297 aa22.5■■□□□ 1.19
RUNX1-203ENST00000358356 PLEKHH1Q9ULM0 1364 aa22.48■■□□□ 1.19
RUNX1-203ENST00000358356 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
RUNX1-203ENST00000358356 NEFMP07197 916 aa22.47■■□□□ 1.19
RUNX1-203ENST00000358356 CCDC146Q8IYE0 955 aa22.47■■□□□ 1.19
RUNX1-203ENST00000358356 UNC13BO14795 1591 aa22.46■■□□□ 1.19
RUNX1-203ENST00000358356 DUSP27Q5VZP5 1158 aa22.44■■□□□ 1.18
RUNX1-203ENST00000358356 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
RUNX1-203ENST00000358356 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
RUNX1-203ENST00000358356 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
RUNX1-203ENST00000358356 ZMYM4Q5VZL5 1548 aa22.42■■□□□ 1.18
RUNX1-203ENST00000358356 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
RUNX1-203ENST00000358356 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
RUNX1-203ENST00000358356 GOLGA2Q08379 1002 aa22.4■■□□□ 1.18
RUNX1-203ENST00000358356 UHRF1BP1LA0JNW5 1464 aa22.39■■□□□ 1.17
RUNX1-203ENST00000358356 MAST1Q9Y2H9 1570 aa22.39■■□□□ 1.17
RUNX1-203ENST00000358356 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
RUNX1-203ENST00000358356 EIF2AK4Q9P2K8 1649 aaKnown RBP22.38■■□□□ 1.17
RUNX1-203ENST00000358356 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
RUNX1-203ENST00000358356 INSRP06213 1382 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms