RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
SFPQ-201ENST00000357214 RALBP1Q15311 655 aa16.37■□□□□ 0.21
SFPQ-201ENST00000357214 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
SFPQ-201ENST00000357214 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
SFPQ-201ENST00000357214 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
SFPQ-201ENST00000357214 NUTM2DQ5VT03 806 aaPredicted RBP16.35■□□□□ 0.21
SFPQ-201ENST00000357214 PBRM1Q86U86 1689 aa16.35■□□□□ 0.21
SFPQ-201ENST00000357214 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
SFPQ-201ENST00000357214 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
SFPQ-201ENST00000357214 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
SFPQ-201ENST00000357214 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
SFPQ-201ENST00000357214 TMF1P82094 1093 aa16.34■□□□□ 0.21
SFPQ-201ENST00000357214 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.219e-7■■□□□ 12.9
SFPQ-201ENST00000357214 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
SFPQ-201ENST00000357214 RAPGEF6Q8TEU7 1601 aa16.33■□□□□ 0.21
SFPQ-201ENST00000357214 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.2
SFPQ-201ENST00000357214 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
SFPQ-201ENST00000357214 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
SFPQ-201ENST00000357214 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
SFPQ-201ENST00000357214 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
SFPQ-201ENST00000357214 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
SFPQ-201ENST00000357214 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
SFPQ-201ENST00000357214 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
SFPQ-201ENST00000357214 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
SFPQ-201ENST00000357214 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
SFPQ-201ENST00000357214 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
SFPQ-201ENST00000357214 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
SFPQ-201ENST00000357214 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
SFPQ-201ENST00000357214 HSP90AA2PQ14568 343 aaPredicted RBP16.29■□□□□ 0.2
SFPQ-201ENST00000357214 GSE1Q14687 1217 aa16.28■□□□□ 0.2
SFPQ-201ENST00000357214 PANK3Q9H999 370 aa16.28■□□□□ 0.2
SFPQ-201ENST00000357214 KIF3BO15066 747 aa16.28■□□□□ 0.2
SFPQ-201ENST00000357214 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.2
SFPQ-201ENST00000357214 PZPP20742 1482 aa16.27■□□□□ 0.2
SFPQ-201ENST00000357214 SAFB2Q14151 953 aaKnown RBP eCLIP16.27■□□□□ 0.19
SFPQ-201ENST00000357214 NAP1L5Q96NT1 182 aaPredicted RBP16.27■□□□□ 0.19
SFPQ-201ENST00000357214 TEX14Q8IWB6 1497 aa16.26■□□□□ 0.19
SFPQ-201ENST00000357214 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
SFPQ-201ENST00000357214 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
SFPQ-201ENST00000357214 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
SFPQ-201ENST00000357214 ATP10BO94823 1461 aa16.23■□□□□ 0.19
SFPQ-201ENST00000357214 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
SFPQ-201ENST00000357214 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
SFPQ-201ENST00000357214 CDCA8Q53HL2 280 aa16.22■□□□□ 0.19
SFPQ-201ENST00000357214 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
SFPQ-201ENST00000357214 PDE4CQ08493 712 aa16.22■□□□□ 0.19
SFPQ-201ENST00000357214 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
SFPQ-201ENST00000357214 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
SFPQ-201ENST00000357214 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
SFPQ-201ENST00000357214 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
SFPQ-201ENST00000357214 CEP170Q5SW79 1584 aa16.2■□□□□ 0.18
SFPQ-201ENST00000357214 FRAT1Q92837 279 aaPredicted RBP16.2■□□□□ 0.18
SFPQ-201ENST00000357214 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
SFPQ-201ENST00000357214 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
SFPQ-201ENST00000357214 RRP1P56182 461 aaKnown RBP16.19■□□□□ 0.18
SFPQ-201ENST00000357214 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
SFPQ-201ENST00000357214 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
SFPQ-201ENST00000357214 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
SFPQ-201ENST00000357214 PLIN1O60240 522 aa16.19■□□□□ 0.18
SFPQ-201ENST00000357214 KIF14Q15058 1648 aa16.18■□□□□ 0.18
SFPQ-201ENST00000357214 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
SFPQ-201ENST00000357214 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
SFPQ-201ENST00000357214 DHX29Q7Z478 1369 aaKnown RBP16.17■□□□□ 0.18
SFPQ-201ENST00000357214 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
SFPQ-201ENST00000357214 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
SFPQ-201ENST00000357214 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
SFPQ-201ENST00000357214 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
SFPQ-201ENST00000357214 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
SFPQ-201ENST00000357214 NUP160Q12769 1436 aa16.15■□□□□ 0.18
SFPQ-201ENST00000357214 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
SFPQ-201ENST00000357214 ARXQ96QS3 562 aa16.14■□□□□ 0.17
SFPQ-201ENST00000357214 KANK1Q14678 1352 aa16.13■□□□□ 0.17
SFPQ-201ENST00000357214 STK26Q9P289 416 aa16.12■□□□□ 0.17
SFPQ-201ENST00000357214 ADGRL2O95490 1459 aa16.12■□□□□ 0.17
SFPQ-201ENST00000357214 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
SFPQ-201ENST00000357214 RALGAPBQ86X10 1494 aa16.11■□□□□ 0.17
SFPQ-201ENST00000357214 CCDC146Q8IYE0 955 aa16.11■□□□□ 0.17
SFPQ-201ENST00000357214 FGD1P98174 961 aa16.09■□□□□ 0.17
SFPQ-201ENST00000357214 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.17
SFPQ-201ENST00000357214 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.17
SFPQ-201ENST00000357214 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.17
SFPQ-201ENST00000357214 AAMPQ13685 434 aa16.08■□□□□ 0.16
SFPQ-201ENST00000357214 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
SFPQ-201ENST00000357214 CRBNQ96SW2 442 aa16.08■□□□□ 0.16
SFPQ-201ENST00000357214 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
SFPQ-201ENST00000357214 RGS3P49796 1198 aa16.07■□□□□ 0.16
SFPQ-201ENST00000357214 NFKBIBQ15653 356 aa16.07■□□□□ 0.16
SFPQ-201ENST00000357214 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
SFPQ-201ENST00000357214 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
SFPQ-201ENST00000357214 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
SFPQ-201ENST00000357214 ERBINQ96RT1 1412 aa16.05■□□□□ 0.16
SFPQ-201ENST00000357214 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
SFPQ-201ENST00000357214 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
SFPQ-201ENST00000357214 SLC4A3P48751 1232 aa16.04■□□□□ 0.16
SFPQ-201ENST00000357214 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
SFPQ-201ENST00000357214 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
SFPQ-201ENST00000357214 PDE4AP27815 886 aa16.03■□□□□ 0.16
SFPQ-201ENST00000357214 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
SFPQ-201ENST00000357214 FAM135AQ9P2D6 1515 aa16.03■□□□□ 0.16
SFPQ-201ENST00000357214 PPP2R1AP30153 589 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms