RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
NCL-202ENST00000356936 WASHC2CQ9Y4E1 1318 aa26.52■■□□□ 1.84
NCL-202ENST00000356936 EIF2AK4Q9P2K8 1649 aaKnown RBP26.51■■□□□ 1.83
NCL-202ENST00000356936 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
NCL-202ENST00000356936 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
NCL-202ENST00000356936 PTPRKQ15262 1439 aa26.49■■□□□ 1.83
NCL-202ENST00000356936 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
NCL-202ENST00000356936 RRP7BPQ9NSQ0 103 aa26.48■■□□□ 1.83
NCL-202ENST00000356936 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
NCL-202ENST00000356936 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
NCL-202ENST00000356936 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
NCL-202ENST00000356936 PZPP20742 1482 aa26.42■■□□□ 1.82
NCL-202ENST00000356936 CHIC2Q9UKJ5 165 aa26.42■■□□□ 1.82
NCL-202ENST00000356936 NCOA1Q15788 1441 aa26.4■■□□□ 1.82
NCL-202ENST00000356936 ZC3H13Q5T200 1668 aaKnown RBP26.4■■□□□ 1.82
NCL-202ENST00000356936 ADGRL2O95490 1459 aa26.38■■□□□ 1.81
NCL-202ENST00000356936 MYO3AQ8NEV4 1616 aa26.38■■□□□ 1.81
NCL-202ENST00000356936 ABCC3O15438 1527 aa26.37■■□□□ 1.81
NCL-202ENST00000356936 MROH1Q8NDA8 1641 aa26.36■■□□□ 1.81
NCL-202ENST00000356936 TNRQ92752 1358 aa26.35■■□□□ 1.81
NCL-202ENST00000356936 FBXO31Q5XUX0 539 aaPredicted RBP26.35■■□□□ 1.81
NCL-202ENST00000356936 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
NCL-202ENST00000356936 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
NCL-202ENST00000356936 CEP170BQ9Y4F5 1589 aaPredicted RBP26.34■■□□□ 1.81
NCL-202ENST00000356936 PRDM15P57071 1507 aaPredicted RBP26.34■■□□□ 1.81
NCL-202ENST00000356936 KANK1Q14678 1352 aa26.33■■□□□ 1.8
NCL-202ENST00000356936 STRCQ7RTU9 1775 aa26.32■■□□□ 1.8
NCL-202ENST00000356936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.32■■□□□ 1.81e-23■□□□□ 10.8
NCL-202ENST00000356936 A2ML1A8K2U0 1454 aa26.31■■□□□ 1.8
NCL-202ENST00000356936 CAMSAP1Q5T5Y3 1602 aa26.31■■□□□ 1.8
NCL-202ENST00000356936 PTPRTO14522 1441 aa26.29■■□□□ 1.8
NCL-202ENST00000356936 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
NCL-202ENST00000356936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.28■■□□□ 1.84e-13■■■□□ 16.9
NCL-202ENST00000356936 PLA2R1Q13018 1463 aa26.28■■□□□ 1.8
NCL-202ENST00000356936 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
NCL-202ENST00000356936 ANKRD50Q9ULJ7 1429 aa26.26■■□□□ 1.79
NCL-202ENST00000356936 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
NCL-202ENST00000356936 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
NCL-202ENST00000356936 PKD2Q13563 968 aa26.25■■□□□ 1.79
NCL-202ENST00000356936 CEP152O94986 1710 aa26.25■■□□□ 1.79
NCL-202ENST00000356936 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
NCL-202ENST00000356936 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
NCL-202ENST00000356936 ILDR1Q86SU0 546 aaPredicted RBP26.21■■□□□ 1.79
NCL-202ENST00000356936 LMTK2Q8IWU2 1503 aa26.2■■□□□ 1.79
NCL-202ENST00000356936 THEMISQ8N1K5 641 aaPredicted RBP26.2■■□□□ 1.78
NCL-202ENST00000356936 NCKAP5LQ9HCH0 1330 aa26.19■■□□□ 1.78
NCL-202ENST00000356936 ITGAEP38570 1179 aa26.19■■□□□ 1.78
NCL-202ENST00000356936 VWDEQ8N2E2 1590 aa26.19■■□□□ 1.78
NCL-202ENST00000356936 RRBP1Q9P2E9 1410 aaKnown RBP26.18■■□□□ 1.78
NCL-202ENST00000356936 UGGT1Q9NYU2 1555 aa26.17■■□□□ 1.78
NCL-202ENST00000356936 FBXO41Q8TF61 875 aa26.15■■□□□ 1.78
NCL-202ENST00000356936 CERKQ8TCT0 537 aa26.14■■□□□ 1.78
NCL-202ENST00000356936 ANKLE2Q86XL3 938 aa26.11■■□□□ 1.77
NCL-202ENST00000356936 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
NCL-202ENST00000356936 UNC13BO14795 1591 aa26.07■■□□□ 1.76
NCL-202ENST00000356936 RPRD2Q5VT52 1461 aaKnown RBP26.07■■□□□ 1.76
NCL-202ENST00000356936 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
NCL-202ENST00000356936 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
NCL-202ENST00000356936 TET3O43151 1660 aa26.03■■□□□ 1.76
NCL-202ENST00000356936 NOS1P29475 1434 aa26.02■■□□□ 1.76
NCL-202ENST00000356936 UBR1Q8IWV7 1749 aa26.01■■□□□ 1.75
NCL-202ENST00000356936 STAG3Q9UJ98 1225 aa26.01■■□□□ 1.75
NCL-202ENST00000356936 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
NCL-202ENST00000356936 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
NCL-202ENST00000356936 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
NCL-202ENST00000356936 MED14O60244 1454 aa25.99■■□□□ 1.75
NCL-202ENST00000356936 NUP155O75694 1391 aa25.99■■□□□ 1.75
NCL-202ENST00000356936 IDI1Q13907 227 aa25.98■■□□□ 1.75
NCL-202ENST00000356936 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
NCL-202ENST00000356936 GCC2Q8IWJ2 1684 aa25.97■■□□□ 1.75
NCL-202ENST00000356936 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
NCL-202ENST00000356936 IQGAP3Q86VI3 1631 aa25.97■■□□□ 1.75
NCL-202ENST00000356936 SYNMO15061 1565 aa25.96■■□□□ 1.75
NCL-202ENST00000356936 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
NCL-202ENST00000356936 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
NCL-202ENST00000356936 SLIT1O75093 1534 aa25.95■■□□□ 1.74
NCL-202ENST00000356936 EID1Q9Y6B2 187 aa25.95■■□□□ 1.74
NCL-202ENST00000356936 IQSEC2Q5JU85 1478 aa25.95■■□□□ 1.74
NCL-202ENST00000356936 ARHGAP23Q9P227 1491 aa25.94■■□□□ 1.74
NCL-202ENST00000356936 SCAF11Q99590 1463 aaKnown RBP25.93■■□□□ 1.74
NCL-202ENST00000356936 NAIPQ13075 1403 aa25.92■■□□□ 1.74
NCL-202ENST00000356936 TXNDC2Q86VQ3 553 aa25.92■■□□□ 1.74
NCL-202ENST00000356936 TMEM2Q9UHN6 1383 aa25.92■■□□□ 1.74
NCL-202ENST00000356936 IQGAP1P46940 1657 aa25.9■■□□□ 1.74
NCL-202ENST00000356936 HFM1A2PYH4 1435 aa25.9■■□□□ 1.74
NCL-202ENST00000356936 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
NCL-202ENST00000356936 E9PCH4 1651 aa25.88■■□□□ 1.73
NCL-202ENST00000356936 LTKP29376 864 aa25.87■■□□□ 1.73
NCL-202ENST00000356936 CPS1P31327 1500 aa25.85■■□□□ 1.73
NCL-202ENST00000356936 HDGFP51858 240 aaKnown RBP25.81■■□□□ 1.72
NCL-202ENST00000356936 TRIM52Q96A61 297 aa25.78■■□□□ 1.72
NCL-202ENST00000356936 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
NCL-202ENST00000356936 CHGAP10645 457 aaKnown RBP25.76■■□□□ 1.71
NCL-202ENST00000356936 PPP1R15AO75807 674 aaPredicted RBP25.73■■□□□ 1.71
NCL-202ENST00000356936 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.73■■□□□ 1.712e-60■□□□□ 8.1
NCL-202ENST00000356936 ZFYVE9O95405 1425 aa25.72■■□□□ 1.71
NCL-202ENST00000356936 RIMS2Q9UQ26 1411 aa25.72■■□□□ 1.71
NCL-202ENST00000356936 UBAP1LF5GYI3 381 aa25.71■■□□□ 1.71
NCL-202ENST00000356936 SPHKAPQ2M3C7 1700 aa25.71■■□□□ 1.71
NCL-202ENST00000356936 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms