RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
C11orf54-202ENST00000354421 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
C11orf54-202ENST00000354421 PRG4Q92954 1404 aaPredicted RBP11.22□□□□□ -0.61
C11orf54-202ENST00000354421 HSPA1LP34931 641 aa11.21□□□□□ -0.62
C11orf54-202ENST00000354421 PTPRTO14522 1441 aa11.2□□□□□ -0.62
C11orf54-202ENST00000354421 YEATS2Q9ULM3 1422 aa11.2□□□□□ -0.62
C11orf54-202ENST00000354421 CCDC88BA6NC98 1476 aa11.2□□□□□ -0.62
C11orf54-202ENST00000354421 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
C11orf54-202ENST00000354421 G3V3G9 751 aa11.2□□□□□ -0.62
C11orf54-202ENST00000354421 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
C11orf54-202ENST00000354421 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
C11orf54-202ENST00000354421 NUP160Q12769 1436 aa11.19□□□□□ -0.62
C11orf54-202ENST00000354421 SRCAPQ6ZRS2 3230 aa11.17□□□□□ -0.62
C11orf54-202ENST00000354421 RGS17Q9UGC6 210 aaPredicted RBP11.15□□□□□ -0.62
C11orf54-202ENST00000354421 GRIN2AQ12879 1464 aa11.14□□□□□ -0.63
C11orf54-202ENST00000354421 CABP2Q9NPB3 220 aa11.14□□□□□ -0.63
C11orf54-202ENST00000354421 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
C11orf54-202ENST00000354421 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
C11orf54-202ENST00000354421 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
C11orf54-202ENST00000354421 PLB1Q6P1J6 1458 aa11.13□□□□□ -0.63
C11orf54-202ENST00000354421 MADDQ8WXG6 1647 aa11.13□□□□□ -0.63
C11orf54-202ENST00000354421 GOLGA3Q08378 1498 aa11.12□□□□□ -0.63
C11orf54-202ENST00000354421 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
C11orf54-202ENST00000354421 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
C11orf54-202ENST00000354421 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
C11orf54-202ENST00000354421 MAP3K4Q9Y6R4 1608 aa11.09□□□□□ -0.63
C11orf54-202ENST00000354421 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
C11orf54-202ENST00000354421 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
C11orf54-202ENST00000354421 IFNLR1Q8IU57 520 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-202ENST00000354421 BCORL1Q5H9F3 1711 aa11.07□□□□□ -0.64
C11orf54-202ENST00000354421 RUSC2Q8N2Y8 1516 aa11.06□□□□□ -0.64
C11orf54-202ENST00000354421 UPF1Q92900 1129 aaKnown RBP eCLIP11.06□□□□□ -0.64
C11orf54-202ENST00000354421 TTBK1Q5TCY1 1321 aaPredicted RBP11.05□□□□□ -0.64
C11orf54-202ENST00000354421 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
C11orf54-202ENST00000354421 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
C11orf54-202ENST00000354421 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
C11orf54-202ENST00000354421 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
C11orf54-202ENST00000354421 CLSPNQ9HAW4 1339 aa11.04□□□□□ -0.64
C11orf54-202ENST00000354421 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
C11orf54-202ENST00000354421 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
C11orf54-202ENST00000354421 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
C11orf54-202ENST00000354421 POTEAQ6S8J7 498 aa11.02□□□□□ -0.65
C11orf54-202ENST00000354421 EPRSP07814 1512 aaKnown RBP11.02□□□□□ -0.65
C11orf54-202ENST00000354421 ARID4BQ4LE39 1312 aaPredicted RBP11.02□□□□□ -0.65
C11orf54-202ENST00000354421 CFAP43Q8NDM7 1665 aa11.02□□□□□ -0.65
C11orf54-202ENST00000354421 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
C11orf54-202ENST00000354421 PTGER2P43116 358 aa11.01□□□□□ -0.65
C11orf54-202ENST00000354421 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
C11orf54-202ENST00000354421 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
C11orf54-202ENST00000354421 PIP4K2BP78356 416 aa10.99□□□□□ -0.65
C11orf54-202ENST00000354421 CLIP1P30622 1438 aa10.98□□□□□ -0.65
C11orf54-202ENST00000354421 ABCC2Q92887 1545 aa10.98□□□□□ -0.65
C11orf54-202ENST00000354421 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
C11orf54-202ENST00000354421 ERBB3P21860 1342 aa10.97□□□□□ -0.65
C11orf54-202ENST00000354421 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
C11orf54-202ENST00000354421 ZSWIM6Q9HCJ5 1215 aa10.95□□□□□ -0.66
C11orf54-202ENST00000354421 SETD1AO15047 1707 aaKnown RBP10.94□□□□□ -0.66
C11orf54-202ENST00000354421 SOX12O15370 315 aa10.92□□□□□ -0.66
C11orf54-202ENST00000354421 TOM1O60784 492 aa10.92□□□□□ -0.66
C11orf54-202ENST00000354421 PREX1Q8TCU6 1659 aa10.91□□□□□ -0.66
C11orf54-202ENST00000354421 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
C11orf54-202ENST00000354421 MICALL2Q8IY33 904 aa10.9□□□□□ -0.66
C11orf54-202ENST00000354421 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
C11orf54-202ENST00000354421 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
C11orf54-202ENST00000354421 DHX57Q6P158 1386 aaKnown RBP10.88□□□□□ -0.67
C11orf54-202ENST00000354421 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
C11orf54-202ENST00000354421 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
C11orf54-202ENST00000354421 RIOK3O14730 519 aaKnown RBP10.87□□□□□ -0.67
C11orf54-202ENST00000354421 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
C11orf54-202ENST00000354421 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
C11orf54-202ENST00000354421 SUPT16HQ9Y5B9 1047 aaKnown RBP10.87□□□□□ -0.67
C11orf54-202ENST00000354421 RAPGEF2Q9Y4G8 1499 aa10.86□□□□□ -0.67
C11orf54-202ENST00000354421 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
C11orf54-202ENST00000354421 CD109Q6YHK3 1445 aa10.85□□□□□ -0.67
C11orf54-202ENST00000354421 VGFO15240 615 aaPredicted RBP10.85□□□□□ -0.67
C11orf54-202ENST00000354421 VARS2Q5ST30 1063 aaKnown RBP10.85□□□□□ -0.67
C11orf54-202ENST00000354421 PTPRGP23470 1445 aa10.85□□□□□ -0.67
C11orf54-202ENST00000354421 SLC34A2O95436 690 aa10.84□□□□□ -0.67
C11orf54-202ENST00000354421 UHRF1BP1Q6BDS2 1440 aa10.84□□□□□ -0.67
C11orf54-202ENST00000354421 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
C11orf54-202ENST00000354421 ERICH3Q5RHP9 1530 aa10.83□□□□□ -0.68
C11orf54-202ENST00000354421 CUL7Q14999 1698 aa10.82□□□□□ -0.68
C11orf54-202ENST00000354421 TMEM92Q6UXU6 159 aa10.82□□□□□ -0.68
C11orf54-202ENST00000354421 POGZQ7Z3K3 1410 aa10.81□□□□□ -0.68
C11orf54-202ENST00000354421 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
C11orf54-202ENST00000354421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
C11orf54-202ENST00000354421 ZFP91Q96JP5 570 aaPredicted RBP10.81□□□□□ -0.68
C11orf54-202ENST00000354421 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
C11orf54-202ENST00000354421 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
C11orf54-202ENST00000354421 UHRF1BP1LA0JNW5 1464 aa10.8□□□□□ -0.68
C11orf54-202ENST00000354421 TTC37Q6PGP7 1564 aa10.79□□□□□ -0.68
C11orf54-202ENST00000354421 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
C11orf54-202ENST00000354421 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
C11orf54-202ENST00000354421 PHF8Q9UPP1 1060 aa10.78□□□□□ -0.68
C11orf54-202ENST00000354421 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
C11orf54-202ENST00000354421 PRXQ9BXM0 1461 aa10.78□□□□□ -0.68
C11orf54-202ENST00000354421 ABCA10Q8WWZ4 1543 aa10.78□□□□□ -0.68
C11orf54-202ENST00000354421 NCOA1Q15788 1441 aa10.77□□□□□ -0.68
C11orf54-202ENST00000354421 NLRP6P59044 892 aa10.76□□□□□ -0.69
C11orf54-202ENST00000354421 RNF25Q96BH1 459 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms