RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 EFCAB2Q5VUJ9 269 aa20.73■□□□□ 0.91
LIMK2-203ENST00000340552 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
LIMK2-203ENST00000340552 NEFMP07197 916 aa20.72■□□□□ 0.91
LIMK2-203ENST00000340552 BRPF3Q9ULD4 1205 aa20.7■□□□□ 0.9
LIMK2-203ENST00000340552 MAST1Q9Y2H9 1570 aa20.7■□□□□ 0.9
LIMK2-203ENST00000340552 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
LIMK2-203ENST00000340552 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
LIMK2-203ENST00000340552 ZBED9Q6R2W3 1325 aa20.69■□□□□ 0.9
LIMK2-203ENST00000340552 USP35Q9P2H5 1018 aa20.68■□□□□ 0.9
LIMK2-203ENST00000340552 NUP155O75694 1391 aa20.68■□□□□ 0.9
LIMK2-203ENST00000340552 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
LIMK2-203ENST00000340552 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
LIMK2-203ENST00000340552 ASXL2Q76L83 1435 aa20.66■□□□□ 0.9
LIMK2-203ENST00000340552 ABCC1P33527 1531 aa20.66■□□□□ 0.9
LIMK2-203ENST00000340552 ARAP3Q8WWN8 1544 aa20.66■□□□□ 0.9
LIMK2-203ENST00000340552 PKD2Q13563 968 aa20.66■□□□□ 0.9
LIMK2-203ENST00000340552 NPM1P06748 294 aaKnown RBP eCLIP20.64■□□□□ 0.9
LIMK2-203ENST00000340552 KDM5DQ9BY66 1539 aa20.64■□□□□ 0.89
LIMK2-203ENST00000340552 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
LIMK2-203ENST00000340552 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
LIMK2-203ENST00000340552 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
LIMK2-203ENST00000340552 TRAPPC8Q9Y2L5 1435 aa20.61■□□□□ 0.89
LIMK2-203ENST00000340552 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
LIMK2-203ENST00000340552 FANCAO15360 1455 aa20.58■□□□□ 0.89
LIMK2-203ENST00000340552 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
LIMK2-203ENST00000340552 PKNOX2Q96KN3 472 aa20.58■□□□□ 0.88
LIMK2-203ENST00000340552 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
LIMK2-203ENST00000340552 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
LIMK2-203ENST00000340552 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
LIMK2-203ENST00000340552 AFAP1Q8N556 730 aa20.55■□□□□ 0.88
LIMK2-203ENST00000340552 FAM135AQ9P2D6 1515 aa20.54■□□□□ 0.88
LIMK2-203ENST00000340552 SPAG9O60271 1321 aaKnown RBP20.54■□□□□ 0.88
LIMK2-203ENST00000340552 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
LIMK2-203ENST00000340552 UNC13BO14795 1591 aa20.54■□□□□ 0.88
LIMK2-203ENST00000340552 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
LIMK2-203ENST00000340552 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
LIMK2-203ENST00000340552 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
LIMK2-203ENST00000340552 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
LIMK2-203ENST00000340552 GSE1Q14687 1217 aa20.52■□□□□ 0.88
LIMK2-203ENST00000340552 ERBINQ96RT1 1412 aa20.52■□□□□ 0.88
LIMK2-203ENST00000340552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.875e-7■□□□□ 11
LIMK2-203ENST00000340552 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
LIMK2-203ENST00000340552 ADGRL1O94910 1474 aa20.5■□□□□ 0.87
LIMK2-203ENST00000340552 ZFYVE16Q7Z3T8 1539 aa20.49■□□□□ 0.87
LIMK2-203ENST00000340552 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
LIMK2-203ENST00000340552 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
LIMK2-203ENST00000340552 IQGAP3Q86VI3 1631 aa20.46■□□□□ 0.87
LIMK2-203ENST00000340552 RSPH6AQ9H0K4 717 aa20.46■□□□□ 0.87
LIMK2-203ENST00000340552 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
LIMK2-203ENST00000340552 MAGI2Q86UL8 1455 aa20.45■□□□□ 0.86
LIMK2-203ENST00000340552 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
LIMK2-203ENST00000340552 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
LIMK2-203ENST00000340552 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
LIMK2-203ENST00000340552 PDE4AP27815 886 aa20.44■□□□□ 0.86
LIMK2-203ENST00000340552 INO80Q9ULG1 1556 aaPredicted RBP20.43■□□□□ 0.86
LIMK2-203ENST00000340552 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
LIMK2-203ENST00000340552 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
LIMK2-203ENST00000340552 TCERG1O14776 1098 aaKnown RBP20.4■□□□□ 0.86
LIMK2-203ENST00000340552 BACH2Q9BYV9 841 aa20.4■□□□□ 0.86
LIMK2-203ENST00000340552 NFKBIBQ15653 356 aa20.39■□□□□ 0.85
LIMK2-203ENST00000340552 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
LIMK2-203ENST00000340552 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
LIMK2-203ENST00000340552 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
LIMK2-203ENST00000340552 CFAP74Q9C0B2 1584 aa20.38■□□□□ 0.85
LIMK2-203ENST00000340552 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
LIMK2-203ENST00000340552 ZNF326Q5BKZ1 582 aaKnown RBP20.37■□□□□ 0.85
LIMK2-203ENST00000340552 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
LIMK2-203ENST00000340552 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
LIMK2-203ENST00000340552 PLA2R1Q13018 1463 aa20.36■□□□□ 0.85
LIMK2-203ENST00000340552 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
LIMK2-203ENST00000340552 KIDINS220Q9ULH0 1771 aa20.34■□□□□ 0.85
LIMK2-203ENST00000340552 DEPDC5O75140 1603 aa20.33■□□□□ 0.85
LIMK2-203ENST00000340552 DHX29Q7Z478 1369 aaKnown RBP20.33■□□□□ 0.85
LIMK2-203ENST00000340552 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.84
LIMK2-203ENST00000340552 KIF3BO15066 747 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 ATP10AO60312 1499 aa20.31■□□□□ 0.84
LIMK2-203ENST00000340552 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
LIMK2-203ENST00000340552 KDM5CP41229 1560 aa20.29■□□□□ 0.84
LIMK2-203ENST00000340552 MS4A1P11836 297 aa20.29■□□□□ 0.84
LIMK2-203ENST00000340552 NEO1Q92859 1461 aa20.28■□□□□ 0.84
LIMK2-203ENST00000340552 E9PCH4 1651 aa20.28■□□□□ 0.84
LIMK2-203ENST00000340552 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
LIMK2-203ENST00000340552 KANK1Q14678 1352 aa20.28■□□□□ 0.84
LIMK2-203ENST00000340552 RGL3Q3MIN7 710 aa20.27■□□□□ 0.84
LIMK2-203ENST00000340552 RALGAPBQ86X10 1494 aa20.27■□□□□ 0.84
LIMK2-203ENST00000340552 DDRGK1Q96HY6 314 aa20.27■□□□□ 0.83
LIMK2-203ENST00000340552 POLR1AO95602 1720 aaPredicted RBP20.25■□□□□ 0.83
LIMK2-203ENST00000340552 MLH3Q9UHC1 1453 aa20.25■□□□□ 0.83
LIMK2-203ENST00000340552 MAP3K4Q9Y6R4 1608 aa20.25■□□□□ 0.83
LIMK2-203ENST00000340552 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
LIMK2-203ENST00000340552 TET3O43151 1660 aa20.25■□□□□ 0.83
LIMK2-203ENST00000340552 USP47Q96K76 1375 aa20.25■□□□□ 0.83
LIMK2-203ENST00000340552 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
LIMK2-203ENST00000340552 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
LIMK2-203ENST00000340552 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms