RNA–Protein interactions for RNA: ENST00000340170.8

HIRA-202, Transcript of histone cell cycle regulator, humanhuman

TSL 1 (best) BASIC

Gene HIRA, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRA-202ENST00000340170 C9orf84Q5VXU9 1444 aa29.77■■■□□ 2.36
HIRA-202ENST00000340170 PRKCSHP14314 528 aaPredicted RBP29.76■■■□□ 2.35
HIRA-202ENST00000340170 BCORL1Q5H9F3 1711 aa29.74■■■□□ 2.35
HIRA-202ENST00000340170 MYBBP1AQ9BQG0 1328 aaKnown RBP29.74■■■□□ 2.35
HIRA-202ENST00000340170 RCAN3Q9UKA8 241 aa29.73■■■□□ 2.35
HIRA-202ENST00000340170 PDE4AP27815 886 aa29.71■■■□□ 2.35
HIRA-202ENST00000340170 RRP1P56182 461 aaKnown RBP29.67■■■□□ 2.34
HIRA-202ENST00000340170 RALBP1Q15311 655 aa29.66■■■□□ 2.34
HIRA-202ENST00000340170 PANK3Q9H999 370 aa29.65■■■□□ 2.34
HIRA-202ENST00000340170 KTN1Q86UP2 1357 aaKnown RBP29.64■■■□□ 2.33
HIRA-202ENST00000340170 NLRP13Q86W25 1043 aa29.63■■■□□ 2.33
HIRA-202ENST00000340170 EIF4G3O43432 1585 aaKnown RBP29.63■■■□□ 2.33
HIRA-202ENST00000340170 EIF5BO60841 1220 aaKnown RBP29.63■■■□□ 2.33
HIRA-202ENST00000340170 DAXXQ9UER7 740 aaPredicted RBP29.63■■■□□ 2.33
HIRA-202ENST00000340170 CCDC144AA2RUR9 1427 aa29.6■■■□□ 2.33
HIRA-202ENST00000340170 MBD5Q9P267 1494 aa29.58■■■□□ 2.33
HIRA-202ENST00000340170 ATP10BO94823 1461 aa29.58■■■□□ 2.33
HIRA-202ENST00000340170 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
HIRA-202ENST00000340170 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.32
HIRA-202ENST00000340170 BRPF3Q9ULD4 1205 aa29.57■■■□□ 2.32
HIRA-202ENST00000340170 CEP170Q5SW79 1584 aa29.57■■■□□ 2.32
HIRA-202ENST00000340170 PTPRGP23470 1445 aa29.54■■■□□ 2.32
HIRA-202ENST00000340170 BRD4O60885 1362 aaPredicted RBP29.54■■■□□ 2.32
HIRA-202ENST00000340170 KDM5CP41229 1560 aa29.54■■■□□ 2.32
HIRA-202ENST00000340170 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
HIRA-202ENST00000340170 RALGAPBQ86X10 1494 aa29.53■■■□□ 2.32
HIRA-202ENST00000340170 CRBNQ96SW2 442 aa29.51■■■□□ 2.31
HIRA-202ENST00000340170 RGS3P49796 1198 aa29.5■■■□□ 2.31
HIRA-202ENST00000340170 ARXQ96QS3 562 aa29.5■■■□□ 2.31
HIRA-202ENST00000340170 ADGRL2O95490 1459 aa29.49■■■□□ 2.31
HIRA-202ENST00000340170 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
HIRA-202ENST00000340170 RNF123Q5XPI4 1314 aa29.49■■■□□ 2.31
HIRA-202ENST00000340170 TCERG1O14776 1098 aaKnown RBP29.47■■■□□ 2.31
HIRA-202ENST00000340170 DISP3Q9P2K9 1392 aa29.47■■■□□ 2.31
HIRA-202ENST00000340170 TMF1P82094 1093 aa29.47■■■□□ 2.31
HIRA-202ENST00000340170 BACH2Q9BYV9 841 aa29.46■■■□□ 2.31
HIRA-202ENST00000340170 C20orf194Q5TEA3 1177 aa29.44■■■□□ 2.3
HIRA-202ENST00000340170 WDR43Q15061 677 aaKnown RBP eCLIP29.44■■■□□ 2.3
HIRA-202ENST00000340170 ADAMTS8Q9UP79 889 aa29.44■■■□□ 2.3
HIRA-202ENST00000340170 CCDC146Q8IYE0 955 aa29.43■■■□□ 2.3
HIRA-202ENST00000340170 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
HIRA-202ENST00000340170 KNSTRNQ9Y448 316 aa29.43■■■□□ 2.3
HIRA-202ENST00000340170 UHRF1BP1Q6BDS2 1440 aa29.42■■■□□ 2.3
HIRA-202ENST00000340170 ADGBQ8N7X0 1667 aa29.42■■■□□ 2.3
HIRA-202ENST00000340170 PER1O15534 1290 aaPredicted RBP29.41■■■□□ 2.3
HIRA-202ENST00000340170 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
HIRA-202ENST00000340170 TESK2Q96S53 571 aa29.36■■■□□ 2.29
HIRA-202ENST00000340170 ABCC10Q5T3U5 1492 aa29.36■■■□□ 2.29
HIRA-202ENST00000340170 PRAG1Q86YV5 1406 aa29.34■■■□□ 2.29
HIRA-202ENST00000340170 FAM135AQ9P2D6 1515 aa29.34■■■□□ 2.29
HIRA-202ENST00000340170 PLEKHH2Q8IVE3 1493 aa29.34■■■□□ 2.29
HIRA-202ENST00000340170 ARHGAP5Q13017 1502 aa29.33■■■□□ 2.29
HIRA-202ENST00000340170 PPM1GO15355 546 aaPredicted RBP29.33■■■□□ 2.29
HIRA-202ENST00000340170 CCDC141Q6ZP82 1450 aa29.32■■■□□ 2.28
HIRA-202ENST00000340170 POLR1AO95602 1720 aaPredicted RBP29.32■■■□□ 2.28
HIRA-202ENST00000340170 CDC42BPAQ5VT25 1732 aa29.32■■■□□ 2.28
HIRA-202ENST00000340170 NFKBIBQ15653 356 aa29.31■■■□□ 2.28
HIRA-202ENST00000340170 PARD3Q8TEW0 1356 aa29.31■■■□□ 2.28
HIRA-202ENST00000340170 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
HIRA-202ENST00000340170 TNNT2P45379 298 aaPredicted RBP29.3■■■□□ 2.28
HIRA-202ENST00000340170 CHGAP10645 457 aaKnown RBP29.29■■■□□ 2.28
HIRA-202ENST00000340170 AFAP1Q8N556 730 aa29.29■■■□□ 2.28
HIRA-202ENST00000340170 NUP160Q12769 1436 aa29.29■■■□□ 2.28
HIRA-202ENST00000340170 FRAT1Q92837 279 aaPredicted RBP29.29■■■□□ 2.28
HIRA-202ENST00000340170 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
HIRA-202ENST00000340170 ERBINQ96RT1 1412 aa29.27■■■□□ 2.28
HIRA-202ENST00000340170 ARHGEF12Q9NZN5 1544 aa29.26■■■□□ 2.28
HIRA-202ENST00000340170 NEUROD2Q15784 382 aa29.26■■■□□ 2.28
HIRA-202ENST00000340170 CROCC2H7BZ55 1655 aa29.26■■■□□ 2.27
HIRA-202ENST00000340170 RSPH4AQ5TD94 716 aa29.26■■■□□ 2.27
HIRA-202ENST00000340170 GSE1Q14687 1217 aa29.24■■■□□ 2.27
HIRA-202ENST00000340170 A2MP01023 1474 aa29.24■■■□□ 2.27
HIRA-202ENST00000340170 SHANK2Q9UPX8 1470 aa29.22■■■□□ 2.27
HIRA-202ENST00000340170 PPP2R1AP30153 589 aa29.22■■■□□ 2.27
HIRA-202ENST00000340170 FRAT2O75474 233 aaPredicted RBP29.21■■■□□ 2.27
HIRA-202ENST00000340170 PLA2R1Q13018 1463 aa29.21■■■□□ 2.27
HIRA-202ENST00000340170 ABCA8O94911 1581 aa29.19■■■□□ 2.26
HIRA-202ENST00000340170 DDRGK1Q96HY6 314 aa29.18■■■□□ 2.26
HIRA-202ENST00000340170 APAF1O14727 1248 aa29.17■■■□□ 2.26
HIRA-202ENST00000340170 ADCY10Q96PN6 1610 aa29.17■■■□□ 2.26
HIRA-202ENST00000340170 EFCAB2Q5VUJ9 269 aa29.17■■■□□ 2.26
HIRA-202ENST00000340170 SAMD9LQ8IVG5 1584 aa29.16■■■□□ 2.26
HIRA-202ENST00000340170 KDM5DQ9BY66 1539 aa29.16■■■□□ 2.26
HIRA-202ENST00000340170 GOLGA2Q08379 1002 aa29.15■■■□□ 2.26
HIRA-202ENST00000340170 CANXP27824 592 aaKnown RBP29.14■■■□□ 2.26
HIRA-202ENST00000340170 MS4A1P11836 297 aa29.13■■■□□ 2.25
HIRA-202ENST00000340170 SLKQ9H2G2 1235 aaPredicted RBP29.13■■■□□ 2.25
HIRA-202ENST00000340170 SPAG9O60271 1321 aaKnown RBP29.13■■■□□ 2.25
HIRA-202ENST00000340170 KIF3BO15066 747 aa29.13■■■□□ 2.25
HIRA-202ENST00000340170 USP35Q9P2H5 1018 aa29.12■■■□□ 2.25
HIRA-202ENST00000340170 SPRYD3Q8NCJ5 442 aa29.12■■■□□ 2.25
HIRA-202ENST00000340170 PLEKHH1Q9ULM0 1364 aa29.11■■■□□ 2.25
HIRA-202ENST00000340170 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
HIRA-202ENST00000340170 COL17A1Q9UMD9 1497 aaPredicted RBP29.1■■■□□ 2.25
HIRA-202ENST00000340170 BCAR3O75815 825 aa29.09■■■□□ 2.25
HIRA-202ENST00000340170 RRP7AQ9Y3A4 280 aaKnown RBP29.08■■■□□ 2.25
HIRA-202ENST00000340170 DUSP27Q5VZP5 1158 aa29.07■■■□□ 2.24
HIRA-202ENST00000340170 SPINK5Q9NQ38 1064 aaPredicted RBP29.07■■■□□ 2.24
HIRA-202ENST00000340170 AMER1Q5JTC6 1135 aaPredicted RBP29.04■■■□□ 2.24
HIRA-202ENST00000340170 NUTM2DQ5VT03 806 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms