RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
TNFSF13-201ENST00000338784 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
TNFSF13-201ENST00000338784 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
TNFSF13-201ENST00000338784 BCORL1Q5H9F3 1711 aa20.62■□□□□ 0.89
TNFSF13-201ENST00000338784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.62■□□□□ 0.89
TNFSF13-201ENST00000338784 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
TNFSF13-201ENST00000338784 MYO5CQ9NQX4 1742 aa20.61■□□□□ 0.89
TNFSF13-201ENST00000338784 FAM135AQ9P2D6 1515 aa20.61■□□□□ 0.89
TNFSF13-201ENST00000338784 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
TNFSF13-201ENST00000338784 KDM2AQ9Y2K7 1162 aa20.6■□□□□ 0.89
TNFSF13-201ENST00000338784 ERICH6BQ5W0A0 696 aa20.59■□□□□ 0.89
TNFSF13-201ENST00000338784 ARHGAP5Q13017 1502 aa20.59■□□□□ 0.89
TNFSF13-201ENST00000338784 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.89
TNFSF13-201ENST00000338784 MAST1Q9Y2H9 1570 aa20.56■□□□□ 0.88
TNFSF13-201ENST00000338784 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
TNFSF13-201ENST00000338784 CCDC144AA2RUR9 1427 aa20.55■□□□□ 0.88
TNFSF13-201ENST00000338784 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
TNFSF13-201ENST00000338784 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
TNFSF13-201ENST00000338784 CNGB1Q14028 1251 aaPredicted RBP20.51■□□□□ 0.87
TNFSF13-201ENST00000338784 UNC13BO14795 1591 aa20.51■□□□□ 0.87
TNFSF13-201ENST00000338784 RBM19Q9Y4C8 960 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-201ENST00000338784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
TNFSF13-201ENST00000338784 PLXNC1O60486 1568 aa20.49■□□□□ 0.87
TNFSF13-201ENST00000338784 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
TNFSF13-201ENST00000338784 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
TNFSF13-201ENST00000338784 PPP4R2Q9NY27 417 aa20.48■□□□□ 0.87
TNFSF13-201ENST00000338784 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
TNFSF13-201ENST00000338784 ARAP3Q8WWN8 1544 aa20.47■□□□□ 0.87
TNFSF13-201ENST00000338784 PLCH2O75038 1416 aa20.46■□□□□ 0.87
TNFSF13-201ENST00000338784 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.87
TNFSF13-201ENST00000338784 DUOX2Q9NRD8 1548 aa20.45■□□□□ 0.86
TNFSF13-201ENST00000338784 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
TNFSF13-201ENST00000338784 TMC1Q8TDI8 760 aa20.45■□□□□ 0.86
TNFSF13-201ENST00000338784 PNISRQ8TF01 805 aaKnown RBP20.44■□□□□ 0.86
TNFSF13-201ENST00000338784 EFCAB2Q5VUJ9 269 aa20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 NPM1P06748 294 aaKnown RBP eCLIP20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 RALBP1Q15311 655 aa20.43■□□□□ 0.86
TNFSF13-201ENST00000338784 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
TNFSF13-201ENST00000338784 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
TNFSF13-201ENST00000338784 ABCC1P33527 1531 aa20.41■□□□□ 0.86
TNFSF13-201ENST00000338784 TRPM1Q7Z4N2 1603 aa20.41■□□□□ 0.86
TNFSF13-201ENST00000338784 A2MP01023 1474 aa20.41■□□□□ 0.86
TNFSF13-201ENST00000338784 ATP10AO60312 1499 aa20.4■□□□□ 0.86
TNFSF13-201ENST00000338784 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
TNFSF13-201ENST00000338784 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
TNFSF13-201ENST00000338784 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.86
TNFSF13-201ENST00000338784 BRD4O60885 1362 aaPredicted RBP20.39■□□□□ 0.85
TNFSF13-201ENST00000338784 NUDCQ9Y266 331 aa20.39■□□□□ 0.85
TNFSF13-201ENST00000338784 FAM69CQ0P6D2 419 aa20.38■□□□□ 0.85
TNFSF13-201ENST00000338784 ABCA9Q8IUA7 1624 aa20.37■□□□□ 0.85
TNFSF13-201ENST00000338784 E9PCH4 1651 aa20.36■□□□□ 0.85
TNFSF13-201ENST00000338784 ANP32EQ9BTT0 268 aa20.35■□□□□ 0.85
TNFSF13-201ENST00000338784 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
TNFSF13-201ENST00000338784 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
TNFSF13-201ENST00000338784 LAMC1P11047 1609 aa20.34■□□□□ 0.85
TNFSF13-201ENST00000338784 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
TNFSF13-201ENST00000338784 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
TNFSF13-201ENST00000338784 DIP2BQ9P265 1576 aa20.32■□□□□ 0.84
TNFSF13-201ENST00000338784 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
TNFSF13-201ENST00000338784 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
TNFSF13-201ENST00000338784 TESK2Q96S53 571 aa20.31■□□□□ 0.84
TNFSF13-201ENST00000338784 RNF123Q5XPI4 1314 aa20.31■□□□□ 0.84
TNFSF13-201ENST00000338784 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
TNFSF13-201ENST00000338784 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
TNFSF13-201ENST00000338784 SPAG9O60271 1321 aaKnown RBP20.3■□□□□ 0.84
TNFSF13-201ENST00000338784 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
TNFSF13-201ENST00000338784 RTEL1-TNFRSF6BF6WH68 1400 aa20.29■□□□□ 0.84
TNFSF13-201ENST00000338784 ASXL2Q76L83 1435 aa20.29■□□□□ 0.84
TNFSF13-201ENST00000338784 PER1O15534 1290 aaPredicted RBP20.29■□□□□ 0.84
TNFSF13-201ENST00000338784 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
TNFSF13-201ENST00000338784 DISP3Q9P2K9 1392 aa20.27■□□□□ 0.84
TNFSF13-201ENST00000338784 TMF1P82094 1093 aa20.26■□□□□ 0.83
TNFSF13-201ENST00000338784 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
TNFSF13-201ENST00000338784 ZFYVE16Q7Z3T8 1539 aa20.25■□□□□ 0.83
TNFSF13-201ENST00000338784 FANCAO15360 1455 aa20.25■□□□□ 0.83
TNFSF13-201ENST00000338784 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
TNFSF13-201ENST00000338784 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
TNFSF13-201ENST00000338784 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
TNFSF13-201ENST00000338784 PANK3Q9H999 370 aa20.21■□□□□ 0.83
TNFSF13-201ENST00000338784 TSPOAP1O95153 1857 aa20.21■□□□□ 0.83
TNFSF13-201ENST00000338784 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
TNFSF13-201ENST00000338784 TRPM2O94759 1503 aa20.2■□□□□ 0.82
TNFSF13-201ENST00000338784 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
TNFSF13-201ENST00000338784 PTPRTO14522 1441 aa20.19■□□□□ 0.82
TNFSF13-201ENST00000338784 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
TNFSF13-201ENST00000338784 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
TNFSF13-201ENST00000338784 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
TNFSF13-201ENST00000338784 ADGRL1O94910 1474 aa20.17■□□□□ 0.82
TNFSF13-201ENST00000338784 KANK1Q14678 1352 aa20.16■□□□□ 0.82
TNFSF13-201ENST00000338784 PDE3BQ13370 1112 aa20.16■□□□□ 0.82
TNFSF13-201ENST00000338784 CCDC136Q96JN2 1154 aa20.15■□□□□ 0.82
TNFSF13-201ENST00000338784 DEPDC5O75140 1603 aa20.15■□□□□ 0.82
TNFSF13-201ENST00000338784 INSRP06213 1382 aa20.15■□□□□ 0.82
TNFSF13-201ENST00000338784 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
TNFSF13-201ENST00000338784 MSH5O43196 834 aa20.13■□□□□ 0.81
TNFSF13-201ENST00000338784 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
TNFSF13-201ENST00000338784 ZMYM4Q5VZL5 1548 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms