RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
TNFSF13-201ENST00000338784 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
TNFSF13-201ENST00000338784 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.86
TNFSF13-201ENST00000338784 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
TNFSF13-201ENST00000338784 ABCC9O60706 1549 aa26.44■■□□□ 1.82
TNFSF13-201ENST00000338784 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
TNFSF13-201ENST00000338784 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
TNFSF13-201ENST00000338784 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
TNFSF13-201ENST00000338784 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
TNFSF13-201ENST00000338784 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
TNFSF13-201ENST00000338784 NACADO15069 1562 aa25.41■■□□□ 1.66
TNFSF13-201ENST00000338784 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
TNFSF13-201ENST00000338784 RB1CC1Q8TDY2 1594 aa25.12■■□□□ 1.61
TNFSF13-201ENST00000338784 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
TNFSF13-201ENST00000338784 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
TNFSF13-201ENST00000338784 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
TNFSF13-201ENST00000338784 LOC105371045A0A1W2PR82 267 aa24.61■■□□□ 1.53
TNFSF13-201ENST00000338784 PABPN1Q86U42 306 aaKnown RBP eCLIP24.59■■□□□ 1.53
TNFSF13-201ENST00000338784 CECR2Q9BXF3 1484 aa24.56■■□□□ 1.52
TNFSF13-201ENST00000338784 PCGF6Q9BYE7 350 aa24.5■■□□□ 1.51
TNFSF13-201ENST00000338784 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
TNFSF13-201ENST00000338784 HRCP23327 699 aa24.48■■□□□ 1.51
TNFSF13-201ENST00000338784 TRIM41Q8WV44 630 aa24.45■■□□□ 1.51
TNFSF13-201ENST00000338784 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
TNFSF13-201ENST00000338784 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
TNFSF13-201ENST00000338784 WIZO95785 1651 aa24.31■■□□□ 1.48
TNFSF13-201ENST00000338784 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
TNFSF13-201ENST00000338784 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
TNFSF13-201ENST00000338784 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
TNFSF13-201ENST00000338784 TOP2AP11388 1531 aaKnown RBP24.02■■□□□ 1.44
TNFSF13-201ENST00000338784 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
TNFSF13-201ENST00000338784 PEG3Q9GZU2 1588 aa23.94■■□□□ 1.42
TNFSF13-201ENST00000338784 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
TNFSF13-201ENST00000338784 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
TNFSF13-201ENST00000338784 PPARGC1BQ86YN6 1023 aaKnown RBP23.87■■□□□ 1.41
TNFSF13-201ENST00000338784 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
TNFSF13-201ENST00000338784 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
TNFSF13-201ENST00000338784 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
TNFSF13-201ENST00000338784 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
TNFSF13-201ENST00000338784 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
TNFSF13-201ENST00000338784 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
TNFSF13-201ENST00000338784 SOGA1O94964 1423 aa23.52■■□□□ 1.36
TNFSF13-201ENST00000338784 EEA1Q15075 1411 aa23.51■■□□□ 1.35
TNFSF13-201ENST00000338784 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
TNFSF13-201ENST00000338784 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
TNFSF13-201ENST00000338784 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
TNFSF13-201ENST00000338784 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
TNFSF13-201ENST00000338784 TNIKQ9UKE5 1360 aa23.42■■□□□ 1.34
TNFSF13-201ENST00000338784 CEP162Q5TB80 1403 aa23.4■■□□□ 1.34
TNFSF13-201ENST00000338784 RUSC2Q8N2Y8 1516 aa23.37■■□□□ 1.33
TNFSF13-201ENST00000338784 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
TNFSF13-201ENST00000338784 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
TNFSF13-201ENST00000338784 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
TNFSF13-201ENST00000338784 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
TNFSF13-201ENST00000338784 KIF21BO75037 1637 aa23.13■■□□□ 1.29
TNFSF13-201ENST00000338784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.12■■□□□ 1.29
TNFSF13-201ENST00000338784 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
TNFSF13-201ENST00000338784 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
TNFSF13-201ENST00000338784 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
TNFSF13-201ENST00000338784 CFTRP13569 1480 aa23.02■■□□□ 1.28
TNFSF13-201ENST00000338784 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
TNFSF13-201ENST00000338784 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
TNFSF13-201ENST00000338784 CLIP1P30622 1438 aa22.99■■□□□ 1.27
TNFSF13-201ENST00000338784 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
TNFSF13-201ENST00000338784 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
TNFSF13-201ENST00000338784 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
TNFSF13-201ENST00000338784 CUX2O14529 1486 aa22.87■■□□□ 1.25
TNFSF13-201ENST00000338784 ERCC6Q03468 1493 aa22.86■■□□□ 1.25
TNFSF13-201ENST00000338784 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
TNFSF13-201ENST00000338784 CUX1P39880 1505 aa22.81■■□□□ 1.24
TNFSF13-201ENST00000338784 PRXQ9BXM0 1461 aa22.81■■□□□ 1.24
TNFSF13-201ENST00000338784 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
TNFSF13-201ENST00000338784 APLP2Q06481 763 aa22.8■■□□□ 1.24
TNFSF13-201ENST00000338784 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
TNFSF13-201ENST00000338784 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
TNFSF13-201ENST00000338784 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
TNFSF13-201ENST00000338784 NESP48681 1621 aa22.66■■□□□ 1.22
TNFSF13-201ENST00000338784 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
TNFSF13-201ENST00000338784 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
TNFSF13-201ENST00000338784 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
TNFSF13-201ENST00000338784 DIEXFQ68CQ4 756 aaKnown RBP22.58■■□□□ 1.21
TNFSF13-201ENST00000338784 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
TNFSF13-201ENST00000338784 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
TNFSF13-201ENST00000338784 IGF1RP08069 1367 aa22.48■■□□□ 1.19
TNFSF13-201ENST00000338784 ZNF316A6NFI3 1004 aaPredicted RBP22.48■■□□□ 1.19
TNFSF13-201ENST00000338784 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
TNFSF13-201ENST00000338784 KANK4Q5T7N3 995 aaPredicted RBP22.45■■□□□ 1.18
TNFSF13-201ENST00000338784 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
TNFSF13-201ENST00000338784 SLC24A1O60721 1099 aa22.43■■□□□ 1.18
TNFSF13-201ENST00000338784 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
TNFSF13-201ENST00000338784 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
TNFSF13-201ENST00000338784 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.17
TNFSF13-201ENST00000338784 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
TNFSF13-201ENST00000338784 KIF21AQ7Z4S6 1674 aa22.37■■□□□ 1.17
TNFSF13-201ENST00000338784 RRBP1Q9P2E9 1410 aaKnown RBP22.37■■□□□ 1.17
TNFSF13-201ENST00000338784 CLSPNQ9HAW4 1339 aa22.33■■□□□ 1.17
TNFSF13-201ENST00000338784 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
TNFSF13-201ENST00000338784 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
TNFSF13-201ENST00000338784 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
TNFSF13-201ENST00000338784 URB2Q14146 1524 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms