RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CEP152O94986 1710 aa13.86□□□□□ -0.19
HIF1A-202ENST00000337138 IFT172Q9UG01 1749 aa13.86□□□□□ -0.19
HIF1A-202ENST00000337138 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
HIF1A-202ENST00000337138 ZNF777Q9ULD5 760 aaPredicted RBP13.85□□□□□ -0.19
HIF1A-202ENST00000337138 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
HIF1A-202ENST00000337138 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
HIF1A-202ENST00000337138 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
HIF1A-202ENST00000337138 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
HIF1A-202ENST00000337138 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
HIF1A-202ENST00000337138 ARID4BQ4LE39 1312 aaPredicted RBP13.83□□□□□ -0.19
HIF1A-202ENST00000337138 ERICH6BQ5W0A0 696 aa13.83□□□□□ -0.2
HIF1A-202ENST00000337138 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
HIF1A-202ENST00000337138 VWDEQ8N2E2 1590 aa13.82□□□□□ -0.2
HIF1A-202ENST00000337138 NEURL4Q96JN8 1562 aa13.82□□□□□ -0.2
HIF1A-202ENST00000337138 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
HIF1A-202ENST00000337138 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
HIF1A-202ENST00000337138 USP47Q96K76 1375 aa13.8□□□□□ -0.2
HIF1A-202ENST00000337138 A2MP01023 1474 aa13.8□□□□□ -0.2
HIF1A-202ENST00000337138 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
HIF1A-202ENST00000337138 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
HIF1A-202ENST00000337138 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
HIF1A-202ENST00000337138 KIAA1210Q9ULL0 1709 aa13.78□□□□□ -0.2
HIF1A-202ENST00000337138 MROH1Q8NDA8 1641 aa13.78□□□□□ -0.2
HIF1A-202ENST00000337138 ZCCHC11Q5TAX3 1644 aaKnown RBP13.78□□□□□ -0.2
HIF1A-202ENST00000337138 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
HIF1A-202ENST00000337138 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
HIF1A-202ENST00000337138 COL17A1Q9UMD9 1497 aaPredicted RBP13.76□□□□□ -0.21
HIF1A-202ENST00000337138 KDM2AQ9Y2K7 1162 aa13.75□□□□□ -0.21
HIF1A-202ENST00000337138 NPM2Q86SE8 214 aaKnown RBP13.75□□□□□ -0.21
HIF1A-202ENST00000337138 ABCC1P33527 1531 aa13.75□□□□□ -0.21
HIF1A-202ENST00000337138 INSRP06213 1382 aa13.75□□□□□ -0.21
HIF1A-202ENST00000337138 PARD3Q8TEW0 1356 aa13.75□□□□□ -0.21
HIF1A-202ENST00000337138 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
HIF1A-202ENST00000337138 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
HIF1A-202ENST00000337138 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
HIF1A-202ENST00000337138 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
HIF1A-202ENST00000337138 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
HIF1A-202ENST00000337138 ABCC2Q92887 1545 aa13.74□□□□□ -0.21
HIF1A-202ENST00000337138 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
HIF1A-202ENST00000337138 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
HIF1A-202ENST00000337138 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
HIF1A-202ENST00000337138 ABCA9Q8IUA7 1624 aa13.72□□□□□ -0.21
HIF1A-202ENST00000337138 INO80Q9ULG1 1556 aaPredicted RBP13.72□□□□□ -0.21
HIF1A-202ENST00000337138 MYO3AQ8NEV4 1616 aa13.72□□□□□ -0.21
HIF1A-202ENST00000337138 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
HIF1A-202ENST00000337138 ARAP3Q8WWN8 1544 aa13.72□□□□□ -0.21
HIF1A-202ENST00000337138 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.21
HIF1A-202ENST00000337138 CARMIL2Q6F5E8 1435 aa13.71□□□□□ -0.21
HIF1A-202ENST00000337138 JPH4Q96JJ6 628 aa13.71□□□□□ -0.21
HIF1A-202ENST00000337138 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
HIF1A-202ENST00000337138 CLTCL1P53675 1640 aa13.7□□□□□ -0.22
HIF1A-202ENST00000337138 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
HIF1A-202ENST00000337138 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
HIF1A-202ENST00000337138 ZFYVE16Q7Z3T8 1539 aa13.69□□□□□ -0.22
HIF1A-202ENST00000337138 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
HIF1A-202ENST00000337138 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
HIF1A-202ENST00000337138 TRPM2O94759 1503 aa13.68□□□□□ -0.22
HIF1A-202ENST00000337138 KIF15Q9NS87 1388 aa13.68□□□□□ -0.22
HIF1A-202ENST00000337138 VIRMAQ69YN4 1812 aaKnown RBP13.68□□□□□ -0.22
HIF1A-202ENST00000337138 PKD2Q13563 968 aa13.68□□□□□ -0.22
HIF1A-202ENST00000337138 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
HIF1A-202ENST00000337138 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
HIF1A-202ENST00000337138 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
HIF1A-202ENST00000337138 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
HIF1A-202ENST00000337138 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
HIF1A-202ENST00000337138 MROH2AA6NES4 1674 aa13.67□□□□□ -0.22
HIF1A-202ENST00000337138 TESK2Q96S53 571 aa13.67□□□□□ -0.22
HIF1A-202ENST00000337138 TET3O43151 1660 aa13.66□□□□□ -0.22
HIF1A-202ENST00000337138 PTPRTO14522 1441 aa13.66□□□□□ -0.22
HIF1A-202ENST00000337138 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
HIF1A-202ENST00000337138 SYNMO15061 1565 aa13.65□□□□□ -0.22
HIF1A-202ENST00000337138 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
HIF1A-202ENST00000337138 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
HIF1A-202ENST00000337138 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
HIF1A-202ENST00000337138 NUP155O75694 1391 aa13.62□□□□□ -0.23
HIF1A-202ENST00000337138 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
HIF1A-202ENST00000337138 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
HIF1A-202ENST00000337138 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
HIF1A-202ENST00000337138 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
HIF1A-202ENST00000337138 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
HIF1A-202ENST00000337138 ABCA6Q8N139 1617 aa13.6□□□□□ -0.23
HIF1A-202ENST00000337138 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
HIF1A-202ENST00000337138 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
HIF1A-202ENST00000337138 PLCH2O75038 1416 aa13.58□□□□□ -0.23
HIF1A-202ENST00000337138 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
HIF1A-202ENST00000337138 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
HIF1A-202ENST00000337138 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
HIF1A-202ENST00000337138 SCAPERQ9BY12 1400 aa13.57□□□□□ -0.24
HIF1A-202ENST00000337138 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
HIF1A-202ENST00000337138 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
HIF1A-202ENST00000337138 PPLO60437 1756 aa13.57□□□□□ -0.24
HIF1A-202ENST00000337138 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
HIF1A-202ENST00000337138 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
HIF1A-202ENST00000337138 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
HIF1A-202ENST00000337138 ARHGAP5Q13017 1502 aa13.56□□□□□ -0.24
HIF1A-202ENST00000337138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.248e-7■■□□□ 13.6
HIF1A-202ENST00000337138 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
HIF1A-202ENST00000337138 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.248e-8■□□□□ 11.2
HIF1A-202ENST00000337138 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
HIF1A-202ENST00000337138 SIGLEC1Q9BZZ2 1709 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms