RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
CHGA-202ENST00000334654 UNC13BO14795 1591 aa26.17■■□□□ 1.78
CHGA-202ENST00000334654 HRCP23327 699 aa26.17■■□□□ 1.78
CHGA-202ENST00000334654 GGT6Q6P531 493 aa26.16■■□□□ 1.78
CHGA-202ENST00000334654 PRDM15P57071 1507 aaPredicted RBP26.14■■□□□ 1.78
CHGA-202ENST00000334654 MLECQ14165 292 aa26.13■■□□□ 1.77
CHGA-202ENST00000334654 VWDEQ8N2E2 1590 aa26.13■■□□□ 1.77
CHGA-202ENST00000334654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
CHGA-202ENST00000334654 KDM5DQ9BY66 1539 aa26.08■■□□□ 1.77
CHGA-202ENST00000334654 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
CHGA-202ENST00000334654 ADAMTSL3P82987 1691 aa26.08■■□□□ 1.76
CHGA-202ENST00000334654 NUP155O75694 1391 aa26.07■■□□□ 1.76
CHGA-202ENST00000334654 IQGAP3Q86VI3 1631 aa26.06■■□□□ 1.76
CHGA-202ENST00000334654 CEP152O94986 1710 aa26.05■■□□□ 1.76
CHGA-202ENST00000334654 TRIM52Q96A61 297 aa26.04■■□□□ 1.76
CHGA-202ENST00000334654 PZPP20742 1482 aa26.04■■□□□ 1.76
CHGA-202ENST00000334654 ABCC3O15438 1527 aa26.04■■□□□ 1.76
CHGA-202ENST00000334654 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
CHGA-202ENST00000334654 FAM135AQ9P2D6 1515 aa26.03■■□□□ 1.76
CHGA-202ENST00000334654 KANK1Q14678 1352 aa26.03■■□□□ 1.76
CHGA-202ENST00000334654 LMTK2Q8IWU2 1503 aa26.02■■□□□ 1.76
CHGA-202ENST00000334654 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
CHGA-202ENST00000334654 FER1L4A9Z1Z3 1794 aa26.01■■□□□ 1.75
CHGA-202ENST00000334654 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.75
CHGA-202ENST00000334654 ZC3H13Q5T200 1668 aaKnown RBP26.01■■□□□ 1.75
CHGA-202ENST00000334654 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
CHGA-202ENST00000334654 TET3O43151 1660 aa25.97■■□□□ 1.75
CHGA-202ENST00000334654 MPHOSPH9Q99550 1183 aa25.96■■□□□ 1.75
CHGA-202ENST00000334654 CNTLNQ9NXG0 1405 aa25.96■■□□□ 1.75
CHGA-202ENST00000334654 CAMSAP1Q5T5Y3 1602 aa25.96■■□□□ 1.75
CHGA-202ENST00000334654 KDM4FA0A1W2PPD8 638 aa25.95■■□□□ 1.74
CHGA-202ENST00000334654 MROH2AA6NES4 1674 aa25.94■■□□□ 1.74
CHGA-202ENST00000334654 RIMS1Q86UR5 1692 aaKnown RBP25.94■■□□□ 1.74
CHGA-202ENST00000334654 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
CHGA-202ENST00000334654 EFCAB6Q5THR3 1501 aa25.93■■□□□ 1.74
CHGA-202ENST00000334654 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
CHGA-202ENST00000334654 E9PCH4 1651 aa25.92■■□□□ 1.74
CHGA-202ENST00000334654 ARHGAP31Q2M1Z3 1444 aa25.92■■□□□ 1.74
CHGA-202ENST00000334654 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
CHGA-202ENST00000334654 NPATQ14207 1427 aa25.89■■□□□ 1.74
CHGA-202ENST00000334654 PKD2Q13563 968 aa25.89■■□□□ 1.73
CHGA-202ENST00000334654 C3P01024 1663 aa25.89■■□□□ 1.73
CHGA-202ENST00000334654 CFAP65Q6ZU64 1925 aaKnown RBP25.88■■□□□ 1.73
CHGA-202ENST00000334654 DHX57Q6P158 1386 aaKnown RBP25.88■■□□□ 1.73
CHGA-202ENST00000334654 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
CHGA-202ENST00000334654 FOXD1Q16676 465 aa25.85■■□□□ 1.73
CHGA-202ENST00000334654 RPRD2Q5VT52 1461 aaKnown RBP25.85■■□□□ 1.73
CHGA-202ENST00000334654 PTPRMP28827 1452 aa25.84■■□□□ 1.73
CHGA-202ENST00000334654 FBXO31Q5XUX0 539 aaPredicted RBP25.83■■□□□ 1.73
CHGA-202ENST00000334654 PREX1Q8TCU6 1659 aa25.81■■□□□ 1.72
CHGA-202ENST00000334654 PLA2R1Q13018 1463 aa25.8■■□□□ 1.72
CHGA-202ENST00000334654 PTPRTO14522 1441 aa25.79■■□□□ 1.72
CHGA-202ENST00000334654 NOS1P29475 1434 aa25.79■■□□□ 1.72
CHGA-202ENST00000334654 ERVK-7P63135 1459 aa25.79■■□□□ 1.72
CHGA-202ENST00000334654 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
CHGA-202ENST00000334654 SPHKAPQ2M3C7 1700 aa25.76■■□□□ 1.71
CHGA-202ENST00000334654 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
CHGA-202ENST00000334654 SYNMO15061 1565 aa25.75■■□□□ 1.71
CHGA-202ENST00000334654 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
CHGA-202ENST00000334654 SETD1BQ9UPS6 1966 aaKnown RBP25.71■■□□□ 1.71
CHGA-202ENST00000334654 TRPM2O94759 1503 aa25.71■■□□□ 1.71
CHGA-202ENST00000334654 TNRQ92752 1358 aa25.68■■□□□ 1.7
CHGA-202ENST00000334654 UGGT1Q9NYU2 1555 aa25.68■■□□□ 1.7
CHGA-202ENST00000334654 PIK3C2BO00750 1634 aa25.68■■□□□ 1.7
CHGA-202ENST00000334654 CLTCL1P53675 1640 aa25.66■■□□□ 1.7
CHGA-202ENST00000334654 IDI1Q13907 227 aa25.64■■□□□ 1.69
CHGA-202ENST00000334654 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
CHGA-202ENST00000334654 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
CHGA-202ENST00000334654 MYO3AQ8NEV4 1616 aa25.6■■□□□ 1.69
CHGA-202ENST00000334654 CCDC144AA2RUR9 1427 aa25.59■■□□□ 1.69
CHGA-202ENST00000334654 NLRP1Q9C000 1473 aa25.59■■□□□ 1.69
CHGA-202ENST00000334654 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
CHGA-202ENST00000334654 CLSPNQ9HAW4 1339 aa25.58■■□□□ 1.69
CHGA-202ENST00000334654 KIF1BO60333 1816 aa25.55■■□□□ 1.68
CHGA-202ENST00000334654 TMEM131LA2VDJ0 1609 aa25.54■■□□□ 1.68
CHGA-202ENST00000334654 A2ML1A8K2U0 1454 aa25.54■■□□□ 1.68
CHGA-202ENST00000334654 MYO5BQ9ULV0 1848 aa25.54■■□□□ 1.68
CHGA-202ENST00000334654 ZNF142P52746 1687 aaPredicted RBP25.54■■□□□ 1.68
CHGA-202ENST00000334654 UBR1Q8IWV7 1749 aa25.52■■□□□ 1.68
CHGA-202ENST00000334654 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
CHGA-202ENST00000334654 CEP170BQ9Y4F5 1589 aaPredicted RBP25.52■■□□□ 1.68
CHGA-202ENST00000334654 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
CHGA-202ENST00000334654 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
CHGA-202ENST00000334654 ADGRB3O60242 1522 aa25.5■■□□□ 1.67
CHGA-202ENST00000334654 NEURL4Q96JN8 1562 aa25.49■■□□□ 1.67
CHGA-202ENST00000334654 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
CHGA-202ENST00000334654 CHGAP10645 457 aaKnown RBP25.47■■□□□ 1.67
CHGA-202ENST00000334654 LMTK3Q96Q04 1460 aa25.45■■□□□ 1.66
CHGA-202ENST00000334654 STAG3Q9UJ98 1225 aa25.43■■□□□ 1.66
CHGA-202ENST00000334654 RGL3Q3MIN7 710 aa25.42■■□□□ 1.66
CHGA-202ENST00000334654 THEMISQ8N1K5 641 aaPredicted RBP25.4■■□□□ 1.66
CHGA-202ENST00000334654 ARHGAP23Q9P227 1491 aa25.39■■□□□ 1.66
CHGA-202ENST00000334654 TMEM2Q9UHN6 1383 aa25.38■■□□□ 1.65
CHGA-202ENST00000334654 SLIT1O75093 1534 aa25.38■■□□□ 1.65
CHGA-202ENST00000334654 ZFYVE9O95405 1425 aa25.38■■□□□ 1.65
CHGA-202ENST00000334654 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
CHGA-202ENST00000334654 IFT172Q9UG01 1749 aa25.37■■□□□ 1.65
CHGA-202ENST00000334654 PPLO60437 1756 aa25.36■■□□□ 1.65
CHGA-202ENST00000334654 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
CHGA-202ENST00000334654 L3MBTL2Q969R5 705 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms