RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ARID3CA6NKF2 412 aa10.33□□□□□ -0.75
USP16-201ENST00000334352 AFAP1Q8N556 730 aa10.33□□□□□ -0.75
USP16-201ENST00000334352 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
USP16-201ENST00000334352 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
USP16-201ENST00000334352 ERBINQ96RT1 1412 aa10.32□□□□□ -0.76
USP16-201ENST00000334352 ARID4BQ4LE39 1312 aaPredicted RBP10.31□□□□□ -0.76
USP16-201ENST00000334352 ZMYM3Q14202 1370 aa10.31□□□□□ -0.76
USP16-201ENST00000334352 CFDP1Q9UEE9 299 aaPredicted RBP10.31□□□□□ -0.76
USP16-201ENST00000334352 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
USP16-201ENST00000334352 ABCC3O15438 1527 aa10.3□□□□□ -0.76
USP16-201ENST00000334352 CPS1P31327 1500 aa10.29□□□□□ -0.76
USP16-201ENST00000334352 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
USP16-201ENST00000334352 SYNMO15061 1565 aa10.29□□□□□ -0.76
USP16-201ENST00000334352 NEURL4Q96JN8 1562 aa10.29□□□□□ -0.76
USP16-201ENST00000334352 PKD2Q13563 968 aa10.29□□□□□ -0.76
USP16-201ENST00000334352 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
USP16-201ENST00000334352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.27□□□□□ -0.77
USP16-201ENST00000334352 SLIT1O75093 1534 aa10.27□□□□□ -0.77
USP16-201ENST00000334352 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
USP16-201ENST00000334352 UBR1Q8IWV7 1749 aa10.26□□□□□ -0.77
USP16-201ENST00000334352 UNC13BO14795 1591 aa10.25□□□□□ -0.77
USP16-201ENST00000334352 GCC2Q8IWJ2 1684 aa10.23□□□□□ -0.77
USP16-201ENST00000334352 RPRD2Q5VT52 1461 aaKnown RBP10.23□□□□□ -0.77
USP16-201ENST00000334352 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
USP16-201ENST00000334352 ERVK-7P63135 1459 aa10.23□□□□□ -0.77
USP16-201ENST00000334352 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
USP16-201ENST00000334352 CEP152O94986 1710 aa10.22□□□□□ -0.77
USP16-201ENST00000334352 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
USP16-201ENST00000334352 ABCC5O15440 1437 aa10.22□□□□□ -0.77
USP16-201ENST00000334352 UGGT1Q9NYU2 1555 aa10.22□□□□□ -0.77
USP16-201ENST00000334352 RANGAP1P46060 587 aaPredicted RBP10.21□□□□□ -0.77
USP16-201ENST00000334352 DAPK1P53355 1430 aa10.21□□□□□ -0.78
USP16-201ENST00000334352 FGD6Q6ZV73 1430 aa10.21□□□□□ -0.78
USP16-201ENST00000334352 TNRQ92752 1358 aa10.21□□□□□ -0.78
USP16-201ENST00000334352 PIK3C2BO00750 1634 aa10.21□□□□□ -0.78
USP16-201ENST00000334352 TET3O43151 1660 aa10.2□□□□□ -0.78
USP16-201ENST00000334352 ATP1B4Q9UN42 357 aaPredicted RBP10.2□□□□□ -0.78
USP16-201ENST00000334352 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
USP16-201ENST00000334352 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
USP16-201ENST00000334352 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
USP16-201ENST00000334352 ESF1Q9H501 851 aaKnown RBP10.18□□□□□ -0.78
USP16-201ENST00000334352 IQGAP3Q86VI3 1631 aa10.18□□□□□ -0.78
USP16-201ENST00000334352 NOS1P29475 1434 aa10.17□□□□□ -0.78
USP16-201ENST00000334352 ZNF644Q9H582 1327 aaPredicted RBP10.16□□□□□ -0.78
USP16-201ENST00000334352 DIP2AQ14689 1571 aa10.15□□□□□ -0.78
USP16-201ENST00000334352 ADGRB3O60242 1522 aa10.15□□□□□ -0.78
USP16-201ENST00000334352 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
USP16-201ENST00000334352 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
USP16-201ENST00000334352 ALKQ9UM73 1620 aa10.13□□□□□ -0.79
USP16-201ENST00000334352 CEBPAP49715 358 aaPredicted RBP10.13□□□□□ -0.79
USP16-201ENST00000334352 ANKRD30AQ9BXX3 1397 aa10.13□□□□□ -0.79
USP16-201ENST00000334352 STRCP1A6NGW2 1772 aa10.13□□□□□ -0.79
USP16-201ENST00000334352 MLECQ14165 292 aa10.12□□□□□ -0.79
USP16-201ENST00000334352 NPHP4O75161 1426 aaPredicted RBP10.12□□□□□ -0.79
USP16-201ENST00000334352 HSPA2P54652 639 aa10.12□□□□□ -0.79
USP16-201ENST00000334352 NCOA3Q9Y6Q9 1424 aa10.12□□□□□ -0.79
USP16-201ENST00000334352 XIRP1Q702N8 1843 aaKnown RBP10.12□□□□□ -0.79
USP16-201ENST00000334352 ZNF777Q9ULD5 760 aaPredicted RBP10.12□□□□□ -0.79
USP16-201ENST00000334352 KIF15Q9NS87 1388 aa10.11□□□□□ -0.79
USP16-201ENST00000334352 THEMISQ8N1K5 641 aaPredicted RBP10.11□□□□□ -0.79
USP16-201ENST00000334352 SCAF11Q99590 1463 aaKnown RBP10.1□□□□□ -0.79
USP16-201ENST00000334352 TMEM131LA2VDJ0 1609 aa10.1□□□□□ -0.79
USP16-201ENST00000334352 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
USP16-201ENST00000334352 NKTRP30414 1462 aaKnown RBP10.09□□□□□ -0.79
USP16-201ENST00000334352 KANK1Q14678 1352 aa10.09□□□□□ -0.79
USP16-201ENST00000334352 PRAG1Q86YV5 1406 aa10.08□□□□□ -0.8
USP16-201ENST00000334352 KIF3BO15066 747 aa10.08□□□□□ -0.8
USP16-201ENST00000334352 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
USP16-201ENST00000334352 E9PCH4 1651 aa10.07□□□□□ -0.8
USP16-201ENST00000334352 CHD2O14647 1828 aaKnown RBP10.07□□□□□ -0.8
USP16-201ENST00000334352 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
USP16-201ENST00000334352 LRRC7Q96NW7 1537 aa10.06□□□□□ -0.8
USP16-201ENST00000334352 ZFYVE9O95405 1425 aa10.06□□□□□ -0.8
USP16-201ENST00000334352 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
USP16-201ENST00000334352 ANKLE2Q86XL3 938 aa10.05□□□□□ -0.8
USP16-201ENST00000334352 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
USP16-201ENST00000334352 PIK3R4Q99570 1358 aa10.04□□□□□ -0.8
USP16-201ENST00000334352 GGT6Q6P531 493 aa10.04□□□□□ -0.8
USP16-201ENST00000334352 TMEM2Q9UHN6 1383 aa10.04□□□□□ -0.8
USP16-201ENST00000334352 SPHKAPQ2M3C7 1700 aa10.03□□□□□ -0.8
USP16-201ENST00000334352 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
USP16-201ENST00000334352 SLC52A1Q9NWF4 448 aa10.03□□□□□ -0.8
USP16-201ENST00000334352 SETBP1Q9Y6X0 1596 aa10.03□□□□□ -0.8
USP16-201ENST00000334352 LAMC1P11047 1609 aa10.03□□□□□ -0.8
USP16-201ENST00000334352 ANKRD50Q9ULJ7 1429 aa10.02□□□□□ -0.8
USP16-201ENST00000334352 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
USP16-201ENST00000334352 XRN1Q8IZH2 1706 aaKnown RBP10.01□□□□□ -0.81
USP16-201ENST00000334352 TRPM2O94759 1503 aa10□□□□□ -0.81
USP16-201ENST00000334352 MYO5BQ9ULV0 1848 aa9.99□□□□□ -0.81
USP16-201ENST00000334352 FAM135BQ49AJ0 1406 aa9.99□□□□□ -0.81
USP16-201ENST00000334352 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
USP16-201ENST00000334352 APLP2Q06481 763 aa9.99□□□□□ -0.81
USP16-201ENST00000334352 NRXN3Q9Y4C0 1643 aa9.98□□□□□ -0.81
USP16-201ENST00000334352 SETD1AO15047 1707 aaKnown RBP9.98□□□□□ -0.81
USP16-201ENST00000334352 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
USP16-201ENST00000334352 ZNF335Q9H4Z2 1342 aaPredicted RBP9.97□□□□□ -0.81
USP16-201ENST00000334352 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
USP16-201ENST00000334352 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
USP16-201ENST00000334352 DCCP43146 1447 aa9.97□□□□□ -0.81
USP16-201ENST00000334352 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms