RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
LIMK2-202ENST00000333611 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
LIMK2-202ENST00000333611 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
LIMK2-202ENST00000333611 HNRNPMP52272 730 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■■■□□ 16.7
LIMK2-202ENST00000333611 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
LIMK2-202ENST00000333611 SPATA31E1Q6ZUB1 1445 aa15.42■□□□□ 0.06
LIMK2-202ENST00000333611 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
LIMK2-202ENST00000333611 ROCK2O75116 1388 aaKnown RBP15.42■□□□□ 0.06
LIMK2-202ENST00000333611 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
LIMK2-202ENST00000333611 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
LIMK2-202ENST00000333611 CRBNQ96SW2 442 aa15.4■□□□□ 0.06
LIMK2-202ENST00000333611 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
LIMK2-202ENST00000333611 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
LIMK2-202ENST00000333611 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
LIMK2-202ENST00000333611 BACH2Q9BYV9 841 aa15.39■□□□□ 0.05
LIMK2-202ENST00000333611 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
LIMK2-202ENST00000333611 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
LIMK2-202ENST00000333611 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
LIMK2-202ENST00000333611 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
LIMK2-202ENST00000333611 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
LIMK2-202ENST00000333611 IQGAP2Q13576 1575 aa15.37■□□□□ 0.05
LIMK2-202ENST00000333611 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
LIMK2-202ENST00000333611 RALBP1Q15311 655 aa15.37■□□□□ 0.05
LIMK2-202ENST00000333611 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
LIMK2-202ENST00000333611 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
LIMK2-202ENST00000333611 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
LIMK2-202ENST00000333611 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
LIMK2-202ENST00000333611 TRIM44Q96DX7 344 aaPredicted RBP15.35■□□□□ 0.05
LIMK2-202ENST00000333611 PANK3Q9H999 370 aa15.34■□□□□ 0.05
LIMK2-202ENST00000333611 PZPP20742 1482 aa15.34■□□□□ 0.05
LIMK2-202ENST00000333611 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.05
LIMK2-202ENST00000333611 ABCA5Q8WWZ7 1642 aa15.33■□□□□ 0.05
LIMK2-202ENST00000333611 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
LIMK2-202ENST00000333611 RNF123Q5XPI4 1314 aa15.33■□□□□ 0.04
LIMK2-202ENST00000333611 L1TD1Q5T7N2 865 aaKnown RBP15.31■□□□□ 0.04
LIMK2-202ENST00000333611 CAMSAP2Q08AD1 1489 aa15.31■□□□□ 0.04
LIMK2-202ENST00000333611 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMK2-202ENST00000333611 FAM13BQ9NYF5 915 aa15.31■□□□□ 0.04
LIMK2-202ENST00000333611 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
LIMK2-202ENST00000333611 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
LIMK2-202ENST00000333611 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
LIMK2-202ENST00000333611 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
LIMK2-202ENST00000333611 PANK2Q9BZ23 570 aa15.3■□□□□ 0.04
LIMK2-202ENST00000333611 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
LIMK2-202ENST00000333611 WDR62O43379 1518 aa15.3■□□□□ 0.04
LIMK2-202ENST00000333611 AAMPQ13685 434 aa15.3■□□□□ 0.04
LIMK2-202ENST00000333611 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
LIMK2-202ENST00000333611 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
LIMK2-202ENST00000333611 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
LIMK2-202ENST00000333611 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
LIMK2-202ENST00000333611 FGD1P98174 961 aa15.26■□□□□ 0.03
LIMK2-202ENST00000333611 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
LIMK2-202ENST00000333611 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
LIMK2-202ENST00000333611 JPH4Q96JJ6 628 aa15.26■□□□□ 0.03
LIMK2-202ENST00000333611 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
LIMK2-202ENST00000333611 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
LIMK2-202ENST00000333611 KNSTRNQ9Y448 316 aa15.24■□□□□ 0.03
LIMK2-202ENST00000333611 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
LIMK2-202ENST00000333611 CANXP27824 592 aaKnown RBP15.23■□□□□ 0.03
LIMK2-202ENST00000333611 GPATCH8Q9UKJ3 1502 aaKnown RBP15.23■□□□□ 0.03
LIMK2-202ENST00000333611 TMF1P82094 1093 aa15.23■□□□□ 0.03
LIMK2-202ENST00000333611 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
LIMK2-202ENST00000333611 C9orf84Q5VXU9 1444 aa15.22■□□□□ 0.03
LIMK2-202ENST00000333611 LRPPRCP42704 1394 aaKnown RBP15.21■□□□□ 0.03
LIMK2-202ENST00000333611 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.03
LIMK2-202ENST00000333611 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
LIMK2-202ENST00000333611 CCDC144AA2RUR9 1427 aa15.21■□□□□ 0.03
LIMK2-202ENST00000333611 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
LIMK2-202ENST00000333611 MS4A1P11836 297 aa15.2■□□□□ 0.02
LIMK2-202ENST00000333611 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
LIMK2-202ENST00000333611 TNNT2P45379 298 aaPredicted RBP15.19■□□□□ 0.02
LIMK2-202ENST00000333611 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
LIMK2-202ENST00000333611 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
LIMK2-202ENST00000333611 KDM5CP41229 1560 aa15.18■□□□□ 0.02
LIMK2-202ENST00000333611 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
LIMK2-202ENST00000333611 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
LIMK2-202ENST00000333611 KIF14Q15058 1648 aa15.17■□□□□ 0.02
LIMK2-202ENST00000333611 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
LIMK2-202ENST00000333611 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
LIMK2-202ENST00000333611 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
LIMK2-202ENST00000333611 ADAMTS12P58397 1594 aa15.16■□□□□ 0.02
LIMK2-202ENST00000333611 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
LIMK2-202ENST00000333611 TARBP1Q13395 1621 aaKnown RBP15.16■□□□□ 0.02
LIMK2-202ENST00000333611 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
LIMK2-202ENST00000333611 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
LIMK2-202ENST00000333611 RAPGEF6Q8TEU7 1601 aa15.16■□□□□ 0.02
LIMK2-202ENST00000333611 PDIA4P13667 645 aaKnown RBP15.15■□□□□ 0.02
LIMK2-202ENST00000333611 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
LIMK2-202ENST00000333611 BECN1Q14457 450 aa15.15■□□□□ 0.02
LIMK2-202ENST00000333611 APAF1O14727 1248 aa15.14■□□□□ 0.01
LIMK2-202ENST00000333611 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
LIMK2-202ENST00000333611 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
LIMK2-202ENST00000333611 ESPNB1AK53 854 aa15.14■□□□□ 0.01
LIMK2-202ENST00000333611 CARMIL2Q6F5E8 1435 aa15.13■□□□□ 0.01
LIMK2-202ENST00000333611 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
LIMK2-202ENST00000333611 BCAR3O75815 825 aa15.13■□□□□ 0.01
LIMK2-202ENST00000333611 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
LIMK2-202ENST00000333611 CLCN1P35523 988 aa15.13■□□□□ 0.01
LIMK2-202ENST00000333611 FAM161AQ3B820 660 aa15.12■□□□□ 0.01
LIMK2-202ENST00000333611 PPP2R1AP30153 589 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms