RNA–Protein interactions for RNA: ENST00000333395.10

EWSR1-204, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene EWSR1, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-204ENST00000333395 LMTK3Q96Q04 1460 aa21.95■■□□□ 1.1
EWSR1-204ENST00000333395 PPARGC1BQ86YN6 1023 aaKnown RBP21.94■■□□□ 1.1
EWSR1-204ENST00000333395 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
EWSR1-204ENST00000333395 EIF2AK4Q9P2K8 1649 aaKnown RBP21.94■■□□□ 1.1
EWSR1-204ENST00000333395 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
EWSR1-204ENST00000333395 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
EWSR1-204ENST00000333395 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
EWSR1-204ENST00000333395 CHIC2Q9UKJ5 165 aa21.92■■□□□ 1.1
EWSR1-204ENST00000333395 KDM5DQ9BY66 1539 aa21.91■■□□□ 1.1
EWSR1-204ENST00000333395 C3P01024 1663 aa21.91■■□□□ 1.1
EWSR1-204ENST00000333395 UHRF1BP1Q6BDS2 1440 aa21.9■■□□□ 1.1
EWSR1-204ENST00000333395 RNF17Q9BXT8 1623 aaKnown RBP21.9■■□□□ 1.1
EWSR1-204ENST00000333395 CLTCQ00610 1675 aaKnown RBP21.88■■□□□ 1.09
EWSR1-204ENST00000333395 PTPRKQ15262 1439 aa21.87■■□□□ 1.09
EWSR1-204ENST00000333395 RRBP1Q9P2E9 1410 aaKnown RBP21.87■■□□□ 1.09
EWSR1-204ENST00000333395 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
EWSR1-204ENST00000333395 PREX1Q8TCU6 1659 aa21.86■■□□□ 1.09
EWSR1-204ENST00000333395 SETD1BQ9UPS6 1966 aaKnown RBP21.85■■□□□ 1.09
EWSR1-204ENST00000333395 PZPP20742 1482 aa21.83■■□□□ 1.09
EWSR1-204ENST00000333395 KANK1Q14678 1352 aa21.82■■□□□ 1.08
EWSR1-204ENST00000333395 ANKRD50Q9ULJ7 1429 aa21.81■■□□□ 1.08
EWSR1-204ENST00000333395 ABCC3O15438 1527 aa21.81■■□□□ 1.08
EWSR1-204ENST00000333395 PRDM15P57071 1507 aaPredicted RBP21.81■■□□□ 1.08
EWSR1-204ENST00000333395 HSPA2P54652 639 aa21.81■■□□□ 1.08
EWSR1-204ENST00000333395 ZC3H13Q5T200 1668 aaKnown RBP21.81■■□□□ 1.08
EWSR1-204ENST00000333395 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
EWSR1-204ENST00000333395 DEPDC5O75140 1603 aa21.77■■□□□ 1.07
EWSR1-204ENST00000333395 TNRQ92752 1358 aa21.76■■□□□ 1.07
EWSR1-204ENST00000333395 ITGAEP38570 1179 aa21.76■■□□□ 1.07
EWSR1-204ENST00000333395 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
EWSR1-204ENST00000333395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.077e-7■■□□□ 13.4
EWSR1-204ENST00000333395 FBXO31Q5XUX0 539 aaPredicted RBP21.74■■□□□ 1.07
EWSR1-204ENST00000333395 LMTK2Q8IWU2 1503 aa21.72■■□□□ 1.07
EWSR1-204ENST00000333395 VWDEQ8N2E2 1590 aa21.71■■□□□ 1.07
EWSR1-204ENST00000333395 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
EWSR1-204ENST00000333395 A2ML1A8K2U0 1454 aa21.71■■□□□ 1.07
EWSR1-204ENST00000333395 NLRP1Q9C000 1473 aa21.71■■□□□ 1.07
EWSR1-204ENST00000333395 MYO3AQ8NEV4 1616 aa21.7■■□□□ 1.06
EWSR1-204ENST00000333395 CEP170BQ9Y4F5 1589 aaPredicted RBP21.69■■□□□ 1.06
EWSR1-204ENST00000333395 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
EWSR1-204ENST00000333395 ERVK-7P63135 1459 aa21.68■■□□□ 1.06
EWSR1-204ENST00000333395 SPATA31D1Q6ZQQ2 1576 aa21.68■■□□□ 1.06
EWSR1-204ENST00000333395 ZNF142P52746 1687 aaPredicted RBP21.68■■□□□ 1.06
EWSR1-204ENST00000333395 PLA2R1Q13018 1463 aa21.65■■□□□ 1.06
EWSR1-204ENST00000333395 CEP152O94986 1710 aa21.65■■□□□ 1.06
EWSR1-204ENST00000333395 ILDR1Q86SU0 546 aaPredicted RBP21.64■■□□□ 1.05
EWSR1-204ENST00000333395 UNC13BO14795 1591 aa21.63■■□□□ 1.05
EWSR1-204ENST00000333395 PKD2Q13563 968 aa21.62■■□□□ 1.05
EWSR1-204ENST00000333395 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
EWSR1-204ENST00000333395 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
EWSR1-204ENST00000333395 PTPRTO14522 1441 aa21.62■■□□□ 1.05
EWSR1-204ENST00000333395 EFCAB6Q5THR3 1501 aa21.61■■□□□ 1.05
EWSR1-204ENST00000333395 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
EWSR1-204ENST00000333395 NAIPQ13075 1403 aa21.59■■□□□ 1.05
EWSR1-204ENST00000333395 NUP155O75694 1391 aa21.59■■□□□ 1.05
EWSR1-204ENST00000333395 UGGT1Q9NYU2 1555 aa21.57■■□□□ 1.04
EWSR1-204ENST00000333395 STRCQ7RTU9 1775 aa21.56■■□□□ 1.04
EWSR1-204ENST00000333395 NOS1P29475 1434 aa21.55■■□□□ 1.04
EWSR1-204ENST00000333395 TET3O43151 1660 aa21.55■■□□□ 1.04
EWSR1-204ENST00000333395 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
EWSR1-204ENST00000333395 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
EWSR1-204ENST00000333395 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
EWSR1-204ENST00000333395 ANKLE2Q86XL3 938 aa21.53■■□□□ 1.04
EWSR1-204ENST00000333395 GCC2Q8IWJ2 1684 aa21.51■■□□□ 1.03
EWSR1-204ENST00000333395 IDI1Q13907 227 aa21.49■■□□□ 1.03
EWSR1-204ENST00000333395 ACIN1Q9UKV3 1341 aaKnown RBP21.49■■□□□ 1.03
EWSR1-204ENST00000333395 STAG3Q9UJ98 1225 aa21.48■■□□□ 1.03
EWSR1-204ENST00000333395 SYNMO15061 1565 aa21.46■■□□□ 1.03
EWSR1-204ENST00000333395 KDM5AP29375 1690 aaKnown RBP21.44■■□□□ 1.02
EWSR1-204ENST00000333395 MED14O60244 1454 aa21.44■■□□□ 1.02
EWSR1-204ENST00000333395 ARHGAP23Q9P227 1491 aa21.44■■□□□ 1.02
EWSR1-204ENST00000333395 SLIT1O75093 1534 aa21.44■■□□□ 1.02
EWSR1-204ENST00000333395 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
EWSR1-204ENST00000333395 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
EWSR1-204ENST00000333395 CFAP65Q6ZU64 1925 aaKnown RBP21.42■■□□□ 1.02
EWSR1-204ENST00000333395 TRIM52Q96A61 297 aa21.42■■□□□ 1.02
EWSR1-204ENST00000333395 TMEM2Q9UHN6 1383 aa21.42■■□□□ 1.02
EWSR1-204ENST00000333395 E9PCH4 1651 aa21.41■■□□□ 1.02
EWSR1-204ENST00000333395 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
EWSR1-204ENST00000333395 NPHP4O75161 1426 aaPredicted RBP21.41■■□□□ 1.02
EWSR1-204ENST00000333395 NEURL4Q96JN8 1562 aa21.4■■□□□ 1.02
EWSR1-204ENST00000333395 ADGRB3O60242 1522 aa21.4■■□□□ 1.02
EWSR1-204ENST00000333395 SCAF11Q99590 1463 aaKnown RBP21.4■■□□□ 1.02
EWSR1-204ENST00000333395 CERKQ8TCT0 537 aa21.4■■□□□ 1.02
EWSR1-204ENST00000333395 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
EWSR1-204ENST00000333395 TXNDC2Q86VQ3 553 aa21.39■■□□□ 1.01
EWSR1-204ENST00000333395 HDGFP51858 240 aaKnown RBP21.37■■□□□ 1.01
EWSR1-204ENST00000333395 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
EWSR1-204ENST00000333395 SLC4A1APQ9BWU0 796 aaKnown RBP21.36■■□□□ 1.01
EWSR1-204ENST00000333395 LTKP29376 864 aa21.35■■□□□ 1.01
EWSR1-204ENST00000333395 LTBP4Q8N2S1 1624 aa21.33■■□□□ 1.01
EWSR1-204ENST00000333395 ZNF335Q9H4Z2 1342 aaPredicted RBP21.33■■□□□ 1.01
EWSR1-204ENST00000333395 FBXO41Q8TF61 875 aa21.33■■□□□ 1.01
EWSR1-204ENST00000333395 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 14e-6■■■□□ 14.7
EWSR1-204ENST00000333395 IQSEC2Q5JU85 1478 aa21.31■■□□□ 1
EWSR1-204ENST00000333395 IQGAP1P46940 1657 aa21.31■■□□□ 1
EWSR1-204ENST00000333395 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
EWSR1-204ENST00000333395 TRPM2O94759 1503 aa21.29■■□□□ 1
EWSR1-204ENST00000333395 TMEM131LA2VDJ0 1609 aa21.29■■□□□ 1
EWSR1-204ENST00000333395 ZFYVE9O95405 1425 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms