RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 CFDP1Q9UEE9 299 aaPredicted RBP23.83■■□□□ 1.4
SOCS3-201ENST00000330871 C8orf34Q49A92 452 aa23.82■■□□□ 1.4
SOCS3-201ENST00000330871 KIF14Q15058 1648 aa23.81■■□□□ 1.4
SOCS3-201ENST00000330871 KDM5CP41229 1560 aa23.81■■□□□ 1.4
SOCS3-201ENST00000330871 C20orf194Q5TEA3 1177 aa23.81■■□□□ 1.4
SOCS3-201ENST00000330871 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
SOCS3-201ENST00000330871 DISP1Q96F81 1524 aa23.8■■□□□ 1.4
SOCS3-201ENST00000330871 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
SOCS3-201ENST00000330871 KIAA0556O60303 1618 aa23.79■■□□□ 1.4
SOCS3-201ENST00000330871 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
SOCS3-201ENST00000330871 HSP90AA2PQ14568 343 aaPredicted RBP23.78■■□□□ 1.4
SOCS3-201ENST00000330871 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
SOCS3-201ENST00000330871 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
SOCS3-201ENST00000330871 UHRF1BP1Q6BDS2 1440 aa23.77■■□□□ 1.4
SOCS3-201ENST00000330871 TROQ12816 1431 aaPredicted RBP23.77■■□□□ 1.4
SOCS3-201ENST00000330871 ADGRL2O95490 1459 aa23.77■■□□□ 1.4
SOCS3-201ENST00000330871 RGS3P49796 1198 aa23.76■■□□□ 1.39
SOCS3-201ENST00000330871 ADGBQ8N7X0 1667 aa23.76■■□□□ 1.39
SOCS3-201ENST00000330871 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
SOCS3-201ENST00000330871 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
SOCS3-201ENST00000330871 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
SOCS3-201ENST00000330871 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
SOCS3-201ENST00000330871 RALGAPBQ86X10 1494 aa23.75■■□□□ 1.39
SOCS3-201ENST00000330871 BRD4O60885 1362 aaPredicted RBP23.74■■□□□ 1.39
SOCS3-201ENST00000330871 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
SOCS3-201ENST00000330871 KDM2BQ8NHM5 1336 aa23.74■■□□□ 1.39
SOCS3-201ENST00000330871 PDE3BQ13370 1112 aa23.73■■□□□ 1.39
SOCS3-201ENST00000330871 GPATCH8Q9UKJ3 1502 aaKnown RBP23.73■■□□□ 1.39
SOCS3-201ENST00000330871 RALBP1Q15311 655 aa23.73■■□□□ 1.39
SOCS3-201ENST00000330871 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
SOCS3-201ENST00000330871 ITSN2Q9NZM3 1697 aa23.71■■□□□ 1.39
SOCS3-201ENST00000330871 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
SOCS3-201ENST00000330871 PNNQ9H307 717 aaKnown RBP23.71■■□□□ 1.39
SOCS3-201ENST00000330871 HSP90AA1P07900 732 aaKnown RBP23.71■■□□□ 1.39
SOCS3-201ENST00000330871 ANKRD50Q9ULJ7 1429 aa23.7■■□□□ 1.39
SOCS3-201ENST00000330871 SLKQ9H2G2 1235 aaPredicted RBP23.69■■□□□ 1.38
SOCS3-201ENST00000330871 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
SOCS3-201ENST00000330871 L1TD1Q5T7N2 865 aaKnown RBP23.68■■□□□ 1.38
SOCS3-201ENST00000330871 CENPQQ7L2Z9 268 aaPredicted RBP23.68■■□□□ 1.38
SOCS3-201ENST00000330871 ARHGEF12Q9NZN5 1544 aa23.66■■□□□ 1.38
SOCS3-201ENST00000330871 NUP155O75694 1391 aa23.66■■□□□ 1.38
SOCS3-201ENST00000330871 RRP9O43818 475 aaKnown RBP23.65■■□□□ 1.38
SOCS3-201ENST00000330871 CROCC2H7BZ55 1655 aa23.65■■□□□ 1.38
SOCS3-201ENST00000330871 PANK2Q9BZ23 570 aa23.62■■□□□ 1.37
SOCS3-201ENST00000330871 XRCC6P12956 609 aaKnown RBP eCLIP23.62■■□□□ 1.37
SOCS3-201ENST00000330871 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
SOCS3-201ENST00000330871 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
SOCS3-201ENST00000330871 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
SOCS3-201ENST00000330871 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
SOCS3-201ENST00000330871 NLRP13Q86W25 1043 aa23.6■■□□□ 1.37
SOCS3-201ENST00000330871 CLCN1P35523 988 aa23.59■■□□□ 1.37
SOCS3-201ENST00000330871 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
SOCS3-201ENST00000330871 GZF1Q9H116 711 aaPredicted RBP23.58■■□□□ 1.36
SOCS3-201ENST00000330871 PLB1Q6P1J6 1458 aa23.58■■□□□ 1.36
SOCS3-201ENST00000330871 PLEKHG5O94827 1062 aa23.55■■□□□ 1.36
SOCS3-201ENST00000330871 USP19O94966 1318 aa23.55■■□□□ 1.36
SOCS3-201ENST00000330871 SHANK2Q9UPX8 1470 aa23.55■■□□□ 1.36
SOCS3-201ENST00000330871 GOLGA6L3A6NEY3 463 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 SEC24BO95487 1268 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 TSPY4P0CV99 314 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 TSPY10P0CW01 314 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 PODXL2Q9NZ53 605 aa23.54■■□□□ 1.36
SOCS3-201ENST00000330871 E9PCH4 1651 aa23.53■■□□□ 1.36
SOCS3-201ENST00000330871 PARD3Q8TEW0 1356 aa23.53■■□□□ 1.36
SOCS3-201ENST00000330871 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
SOCS3-201ENST00000330871 PLEKHD1A6NEE1 506 aa23.51■■□□□ 1.35
SOCS3-201ENST00000330871 PTPRGP23470 1445 aa23.49■■□□□ 1.35
SOCS3-201ENST00000330871 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
SOCS3-201ENST00000330871 BECN1Q14457 450 aa23.48■■□□□ 1.35
SOCS3-201ENST00000330871 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
SOCS3-201ENST00000330871 PER1O15534 1290 aaPredicted RBP23.47■■□□□ 1.35
SOCS3-201ENST00000330871 CARMIL2Q6F5E8 1435 aa23.46■■□□□ 1.35
SOCS3-201ENST00000330871 SPRYD3Q8NCJ5 442 aa23.46■■□□□ 1.35
SOCS3-201ENST00000330871 CDC42BPAQ5VT25 1732 aa23.46■■□□□ 1.35
SOCS3-201ENST00000330871 ANTXR1Q9H6X2 564 aa23.46■■□□□ 1.35
SOCS3-201ENST00000330871 FSD2A1L4K1 749 aa23.45■■□□□ 1.34
SOCS3-201ENST00000330871 ABCC10Q5T3U5 1492 aa23.44■■□□□ 1.34
SOCS3-201ENST00000330871 INSRP06213 1382 aa23.44■■□□□ 1.34
SOCS3-201ENST00000330871 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
SOCS3-201ENST00000330871 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
SOCS3-201ENST00000330871 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
SOCS3-201ENST00000330871 ERBB4Q15303 1308 aa23.41■■□□□ 1.34
SOCS3-201ENST00000330871 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
SOCS3-201ENST00000330871 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
SOCS3-201ENST00000330871 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.34
SOCS3-201ENST00000330871 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.34
SOCS3-201ENST00000330871 IGHDP01880 384 aa23.39■■□□□ 1.33
SOCS3-201ENST00000330871 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.33
SOCS3-201ENST00000330871 ZMYM4Q5VZL5 1548 aa23.39■■□□□ 1.33
SOCS3-201ENST00000330871 TRPM1Q7Z4N2 1603 aa23.38■■□□□ 1.33
SOCS3-201ENST00000330871 CCDC144AA2RUR9 1427 aa23.37■■□□□ 1.33
SOCS3-201ENST00000330871 ESPNB1AK53 854 aa23.37■■□□□ 1.33
SOCS3-201ENST00000330871 NBPF1Q3BBV0 1214 aa23.37■■□□□ 1.33
SOCS3-201ENST00000330871 GPRASP1Q5JY77 1395 aa23.37■■□□□ 1.33
SOCS3-201ENST00000330871 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
SOCS3-201ENST00000330871 MCM4P33991 863 aa23.36■■□□□ 1.33
SOCS3-201ENST00000330871 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.36■■□□□ 1.33
SOCS3-201ENST00000330871 ATP10BO94823 1461 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms