RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 FAM161AQ3B820 660 aa25.93■■□□□ 1.74
CAPN12-201ENST00000328867 CRBNQ96SW2 442 aa25.93■■□□□ 1.74
CAPN12-201ENST00000328867 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
CAPN12-201ENST00000328867 SLC4A1APQ9BWU0 796 aaKnown RBP25.91■■□□□ 1.74
CAPN12-201ENST00000328867 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
CAPN12-201ENST00000328867 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
CAPN12-201ENST00000328867 ABCC5O15440 1437 aa25.9■■□□□ 1.74
CAPN12-201ENST00000328867 KIF14Q15058 1648 aa25.9■■□□□ 1.74
CAPN12-201ENST00000328867 SKAP1Q86WV1 359 aa25.89■■□□□ 1.74
CAPN12-201ENST00000328867 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
CAPN12-201ENST00000328867 CENPQQ7L2Z9 268 aaPredicted RBP25.88■■□□□ 1.73
CAPN12-201ENST00000328867 PLIN1O60240 522 aa25.86■■□□□ 1.73
CAPN12-201ENST00000328867 TROQ12816 1431 aaPredicted RBP25.86■■□□□ 1.73
CAPN12-201ENST00000328867 C8orf34Q49A92 452 aa25.85■■□□□ 1.73
CAPN12-201ENST00000328867 L1TD1Q5T7N2 865 aaKnown RBP25.84■■□□□ 1.73
CAPN12-201ENST00000328867 NLRP13Q86W25 1043 aa25.84■■□□□ 1.73
CAPN12-201ENST00000328867 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
CAPN12-201ENST00000328867 ADCY10Q96PN6 1610 aa25.83■■□□□ 1.73
CAPN12-201ENST00000328867 CDCA7LQ96GN5 454 aa25.82■■□□□ 1.72
CAPN12-201ENST00000328867 INSRP06213 1382 aa25.82■■□□□ 1.72
CAPN12-201ENST00000328867 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
CAPN12-201ENST00000328867 NUP160Q12769 1436 aa25.81■■□□□ 1.72
CAPN12-201ENST00000328867 RRAGDQ9NQL2 400 aaPredicted RBP25.81■■□□□ 1.72
CAPN12-201ENST00000328867 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
CAPN12-201ENST00000328867 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
CAPN12-201ENST00000328867 PLB1Q6P1J6 1458 aa25.8■■□□□ 1.72
CAPN12-201ENST00000328867 ZNF326Q5BKZ1 582 aaKnown RBP25.78■■□□□ 1.72
CAPN12-201ENST00000328867 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
CAPN12-201ENST00000328867 ZMYM4Q5VZL5 1548 aa25.78■■□□□ 1.72
CAPN12-201ENST00000328867 RALGAPBQ86X10 1494 aa25.78■■□□□ 1.72
CAPN12-201ENST00000328867 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
CAPN12-201ENST00000328867 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
CAPN12-201ENST00000328867 UHRF1BP1Q6BDS2 1440 aa25.76■■□□□ 1.71
CAPN12-201ENST00000328867 PLEKHH2Q8IVE3 1493 aa25.75■■□□□ 1.71
CAPN12-201ENST00000328867 GPATCH8Q9UKJ3 1502 aaKnown RBP25.75■■□□□ 1.71
CAPN12-201ENST00000328867 E9PCH4 1651 aa25.75■■□□□ 1.71
CAPN12-201ENST00000328867 PARD3Q8TEW0 1356 aa25.75■■□□□ 1.71
CAPN12-201ENST00000328867 PZPP20742 1482 aa25.74■■□□□ 1.71
CAPN12-201ENST00000328867 POGKQ9P215 609 aa25.73■■□□□ 1.71
CAPN12-201ENST00000328867 CROCC2H7BZ55 1655 aa25.72■■□□□ 1.71
CAPN12-201ENST00000328867 CARD11Q9BXL7 1154 aa25.72■■□□□ 1.71
CAPN12-201ENST00000328867 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
CAPN12-201ENST00000328867 KIAA1107Q9UPP5 1409 aa25.71■■□□□ 1.71
CAPN12-201ENST00000328867 ADGRL2O95490 1459 aa25.7■■□□□ 1.71
CAPN12-201ENST00000328867 VSIG10Q8N0Z9 540 aa25.7■■□□□ 1.71
CAPN12-201ENST00000328867 CFDP1Q9UEE9 299 aaPredicted RBP25.7■■□□□ 1.71
CAPN12-201ENST00000328867 JPH4Q96JJ6 628 aa25.7■■□□□ 1.7
CAPN12-201ENST00000328867 ZMYND15Q9H091 742 aa25.7■■□□□ 1.7
CAPN12-201ENST00000328867 RRP9O43818 475 aaKnown RBP25.69■■□□□ 1.7
CAPN12-201ENST00000328867 C20orf194Q5TEA3 1177 aa25.69■■□□□ 1.7
CAPN12-201ENST00000328867 ABCA8O94911 1581 aa25.68■■□□□ 1.7
CAPN12-201ENST00000328867 FBLN2P98095 1184 aa25.67■■□□□ 1.7
CAPN12-201ENST00000328867 HSP90AA2PQ14568 343 aaPredicted RBP25.66■■□□□ 1.7
CAPN12-201ENST00000328867 PNNQ9H307 717 aaKnown RBP25.66■■□□□ 1.7
CAPN12-201ENST00000328867 NAP1L5Q96NT1 182 aaPredicted RBP25.66■■□□□ 1.7
CAPN12-201ENST00000328867 BECN1Q14457 450 aa25.65■■□□□ 1.7
CAPN12-201ENST00000328867 ST20-MTHFSA0A0A6YYL1 179 aa25.64■■□□□ 1.7
CAPN12-201ENST00000328867 HSP90AA1P07900 732 aaKnown RBP25.64■■□□□ 1.7
CAPN12-201ENST00000328867 CLCN1P35523 988 aa25.64■■□□□ 1.69
CAPN12-201ENST00000328867 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.63■■□□□ 1.69
CAPN12-201ENST00000328867 ARHGEF12Q9NZN5 1544 aa25.61■■□□□ 1.69
CAPN12-201ENST00000328867 RGS3P49796 1198 aa25.61■■□□□ 1.69
CAPN12-201ENST00000328867 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
CAPN12-201ENST00000328867 ABCC10Q5T3U5 1492 aa25.59■■□□□ 1.69
CAPN12-201ENST00000328867 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.68
CAPN12-201ENST00000328867 ATP10BO94823 1461 aa25.57■■□□□ 1.68
CAPN12-201ENST00000328867 VIRMAQ69YN4 1812 aaKnown RBP25.56■■□□□ 1.68
CAPN12-201ENST00000328867 PKD2Q13563 968 aa25.56■■□□□ 1.68
CAPN12-201ENST00000328867 SHANK2Q9UPX8 1470 aa25.56■■□□□ 1.68
CAPN12-201ENST00000328867 USP19O94966 1318 aa25.55■■□□□ 1.68
CAPN12-201ENST00000328867 GOLGA6L3A6NEY3 463 aa25.55■■□□□ 1.68
CAPN12-201ENST00000328867 ZNF777Q9ULD5 760 aaPredicted RBP25.55■■□□□ 1.68
CAPN12-201ENST00000328867 PLEKHD1A6NEE1 506 aa25.54■■□□□ 1.68
CAPN12-201ENST00000328867 PER1O15534 1290 aaPredicted RBP25.53■■□□□ 1.68
CAPN12-201ENST00000328867 XRCC6P12956 609 aaKnown RBP eCLIP25.53■■□□□ 1.68
CAPN12-201ENST00000328867 FSD2A1L4K1 749 aa25.52■■□□□ 1.68
CAPN12-201ENST00000328867 ANKRD50Q9ULJ7 1429 aa25.5■■□□□ 1.67
CAPN12-201ENST00000328867 DUSP27Q5VZP5 1158 aa25.5■■□□□ 1.67
CAPN12-201ENST00000328867 SLKQ9H2G2 1235 aaPredicted RBP25.49■■□□□ 1.67
CAPN12-201ENST00000328867 ANTXR1Q9H6X2 564 aa25.49■■□□□ 1.67
CAPN12-201ENST00000328867 EIF3AQ14152 1382 aaKnown RBP25.49■■□□□ 1.67
CAPN12-201ENST00000328867 C9orf84Q5VXU9 1444 aa25.47■■□□□ 1.67
CAPN12-201ENST00000328867 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
CAPN12-201ENST00000328867 KDM5DQ9BY66 1539 aa25.44■■□□□ 1.66
CAPN12-201ENST00000328867 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
CAPN12-201ENST00000328867 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
CAPN12-201ENST00000328867 GOLGA2Q08379 1002 aa25.42■■□□□ 1.66
CAPN12-201ENST00000328867 KDM2AQ9Y2K7 1162 aa25.41■■□□□ 1.66
CAPN12-201ENST00000328867 PTPRGP23470 1445 aa25.4■■□□□ 1.66
CAPN12-201ENST00000328867 MRE11P49959 708 aa25.39■■□□□ 1.66
CAPN12-201ENST00000328867 ADAMTS8Q9UP79 889 aa25.39■■□□□ 1.66
CAPN12-201ENST00000328867 PLEKHH1Q9ULM0 1364 aa25.39■■□□□ 1.65
CAPN12-201ENST00000328867 ZNF521Q96K83 1311 aa25.39■■□□□ 1.65
CAPN12-201ENST00000328867 PANK2Q9BZ23 570 aa25.38■■□□□ 1.65
CAPN12-201ENST00000328867 NLRP1Q9C000 1473 aa25.38■■□□□ 1.65
CAPN12-201ENST00000328867 SEC24BO95487 1268 aa25.37■■□□□ 1.65
CAPN12-201ENST00000328867 MCM4P33991 863 aa25.37■■□□□ 1.65
CAPN12-201ENST00000328867 ARXQ96QS3 562 aa25.37■■□□□ 1.65
CAPN12-201ENST00000328867 UPF2Q9HAU5 1272 aaKnown RBP25.37■■□□□ 1.65
CAPN12-201ENST00000328867 PREX2Q70Z35 1606 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms