RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 HNRNPUQ00839 825 aaKnown RBP eCLIP29.24■■■□□ 2.27
LPCAT4-201ENST00000314891 CARD11Q9BXL7 1154 aa29.24■■■□□ 2.27
LPCAT4-201ENST00000314891 ERBINQ96RT1 1412 aa29.22■■■□□ 2.27
LPCAT4-201ENST00000314891 MAGI2Q86UL8 1455 aa29.22■■■□□ 2.27
LPCAT4-201ENST00000314891 FKBP8Q14318 412 aa29.19■■■□□ 2.26
LPCAT4-201ENST00000314891 POLR3GLQ9BT43 218 aa29.19■■■□□ 2.26
LPCAT4-201ENST00000314891 DHX29Q7Z478 1369 aaKnown RBP29.17■■■□□ 2.26
LPCAT4-201ENST00000314891 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
LPCAT4-201ENST00000314891 WDR7Q9Y4E6 1490 aa29.16■■■□□ 2.26
LPCAT4-201ENST00000314891 ARAP3Q8WWN8 1544 aa29.16■■■□□ 2.26
LPCAT4-201ENST00000314891 RGL3Q3MIN7 710 aa29.14■■■□□ 2.26
LPCAT4-201ENST00000314891 MRS2Q9HD23 443 aa29.14■■■□□ 2.26
LPCAT4-201ENST00000314891 PRAG1Q86YV5 1406 aa29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 BCANQ96GW7 911 aa29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 ARID4BQ4LE39 1312 aaPredicted RBP29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 ST20-MTHFSA0A0A6YYL1 179 aa29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 AFAP1Q8N556 730 aa29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 A2MP01023 1474 aa29.13■■■□□ 2.25
LPCAT4-201ENST00000314891 ROCK2O75116 1388 aaKnown RBP29.12■■■□□ 2.25
LPCAT4-201ENST00000314891 ZFYVE16Q7Z3T8 1539 aa29.12■■■□□ 2.25
LPCAT4-201ENST00000314891 FAM9BQ8IZU0 186 aa29.1■■■□□ 2.25
LPCAT4-201ENST00000314891 ABCA9Q8IUA7 1624 aa29.1■■■□□ 2.25
LPCAT4-201ENST00000314891 SPAG9O60271 1321 aaKnown RBP29.09■■■□□ 2.25
LPCAT4-201ENST00000314891 ATP10AO60312 1499 aa29.08■■■□□ 2.25
LPCAT4-201ENST00000314891 CNGB1Q14028 1251 aaPredicted RBP29.06■■■□□ 2.24
LPCAT4-201ENST00000314891 RTEL1-TNFRSF6BF6WH68 1400 aa29.06■■■□□ 2.24
LPCAT4-201ENST00000314891 FANCAO15360 1455 aa29.06■■■□□ 2.24
LPCAT4-201ENST00000314891 E9PCH4 1651 aa29.05■■■□□ 2.24
LPCAT4-201ENST00000314891 NEFLP07196 543 aa29.04■■■□□ 2.24
LPCAT4-201ENST00000314891 NBPF1Q3BBV0 1214 aa29.04■■■□□ 2.24
LPCAT4-201ENST00000314891 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
LPCAT4-201ENST00000314891 ASXL2Q76L83 1435 aa28.99■■■□□ 2.23
LPCAT4-201ENST00000314891 DEPDC5O75140 1603 aa28.99■■■□□ 2.23
LPCAT4-201ENST00000314891 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
LPCAT4-201ENST00000314891 GPRASP1Q5JY77 1395 aa28.97■■■□□ 2.23
LPCAT4-201ENST00000314891 LAMC1P11047 1609 aa28.96■■■□□ 2.23
LPCAT4-201ENST00000314891 ADGRL1O94910 1474 aa28.96■■■□□ 2.23
LPCAT4-201ENST00000314891 PRDM15P57071 1507 aaPredicted RBP28.95■■■□□ 2.22
LPCAT4-201ENST00000314891 EIF2AK4Q9P2K8 1649 aaKnown RBP28.95■■■□□ 2.22
LPCAT4-201ENST00000314891 SPHKAPQ2M3C7 1700 aa28.93■■■□□ 2.22
LPCAT4-201ENST00000314891 SCAPERQ9BY12 1400 aa28.93■■■□□ 2.22
LPCAT4-201ENST00000314891 ZBED9Q6R2W3 1325 aa28.91■■■□□ 2.22
LPCAT4-201ENST00000314891 CEP152O94986 1710 aa28.9■■■□□ 2.22
LPCAT4-201ENST00000314891 TRPM2O94759 1503 aa28.9■■■□□ 2.22
LPCAT4-201ENST00000314891 TET3O43151 1660 aa28.89■■■□□ 2.22
LPCAT4-201ENST00000314891 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
LPCAT4-201ENST00000314891 CLTCL1P53675 1640 aa28.86■■■□□ 2.21
LPCAT4-201ENST00000314891 VWDEQ8N2E2 1590 aa28.86■■■□□ 2.21
LPCAT4-201ENST00000314891 OSCARQ8IYS5 282 aa28.86■■■□□ 2.21
LPCAT4-201ENST00000314891 MYT1LQ9UL68 1186 aa28.86■■■□□ 2.21
LPCAT4-201ENST00000314891 PTPRTO14522 1441 aa28.84■■■□□ 2.21
LPCAT4-201ENST00000314891 MADDQ8WXG6 1647 aa28.84■■■□□ 2.21
LPCAT4-201ENST00000314891 KIDINS220Q9ULH0 1771 aa28.84■■■□□ 2.21
LPCAT4-201ENST00000314891 KIF3BO15066 747 aa28.83■■■□□ 2.21
LPCAT4-201ENST00000314891 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
LPCAT4-201ENST00000314891 COL17A1Q9UMD9 1497 aaPredicted RBP28.83■■■□□ 2.21
LPCAT4-201ENST00000314891 TESK2Q96S53 571 aa28.83■■■□□ 2.21
LPCAT4-201ENST00000314891 TSHZ2Q9NRE2 1034 aa28.83■■■□□ 2.21
LPCAT4-201ENST00000314891 DISP3Q9P2K9 1392 aa28.82■■■□□ 2.2
LPCAT4-201ENST00000314891 IRX6P78412 446 aaPredicted RBP28.81■■■□□ 2.2
LPCAT4-201ENST00000314891 KANK1Q14678 1352 aa28.79■■■□□ 2.2
LPCAT4-201ENST00000314891 PNISRQ8TF01 805 aaKnown RBP28.77■■■□□ 2.2
LPCAT4-201ENST00000314891 TMC1Q8TDI8 760 aa28.76■■■□□ 2.19
LPCAT4-201ENST00000314891 NPM1P06748 294 aaKnown RBP eCLIP28.75■■■□□ 2.19
LPCAT4-201ENST00000314891 IQGAP1P46940 1657 aa28.74■■■□□ 2.19
LPCAT4-201ENST00000314891 MYBBP1AQ9BQG0 1328 aaKnown RBP28.73■■■□□ 2.19
LPCAT4-201ENST00000314891 KTN1Q86UP2 1357 aaKnown RBP28.73■■■□□ 2.19
LPCAT4-201ENST00000314891 RALBP1Q15311 655 aa28.73■■■□□ 2.19
LPCAT4-201ENST00000314891 ZNF518AQ6AHZ1 1483 aa28.73■■■□□ 2.19
LPCAT4-201ENST00000314891 PER1O15534 1290 aaPredicted RBP28.72■■■□□ 2.19
LPCAT4-201ENST00000314891 UGGT1Q9NYU2 1555 aa28.71■■■□□ 2.19
LPCAT4-201ENST00000314891 BRD4O60885 1362 aaPredicted RBP28.7■■■□□ 2.18
LPCAT4-201ENST00000314891 SENP3-EIF4A1A0A087X0R7 540 aa28.69■■■□□ 2.18
LPCAT4-201ENST00000314891 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
LPCAT4-201ENST00000314891 PARD3Q8TEW0 1356 aa28.68■■■□□ 2.18
LPCAT4-201ENST00000314891 PPRC1Q5VV67 1664 aaKnown RBP28.68■■■□□ 2.18
LPCAT4-201ENST00000314891 TMF1P82094 1093 aa28.67■■■□□ 2.18
LPCAT4-201ENST00000314891 EFCAB6Q5THR3 1501 aa28.67■■■□□ 2.18
LPCAT4-201ENST00000314891 CFAP74Q9C0B2 1584 aa28.66■■■□□ 2.18
LPCAT4-201ENST00000314891 LRPPRCP42704 1394 aaKnown RBP28.66■■■□□ 2.18
LPCAT4-201ENST00000314891 KIF1BO60333 1816 aa28.65■■■□□ 2.18
LPCAT4-201ENST00000314891 POGZQ7Z3K3 1410 aa28.63■■■□□ 2.17
LPCAT4-201ENST00000314891 PANK3Q9H999 370 aa28.63■■■□□ 2.17
LPCAT4-201ENST00000314891 SMG6Q86US8 1419 aaKnown RBP28.62■■■□□ 2.17
LPCAT4-201ENST00000314891 NEURL4Q96JN8 1562 aa28.61■■■□□ 2.17
LPCAT4-201ENST00000314891 FRMPD1Q5SYB0 1578 aa28.61■■■□□ 2.17
LPCAT4-201ENST00000314891 STAC3Q96MF2 364 aa28.6■■■□□ 2.17
LPCAT4-201ENST00000314891 MROH2AA6NES4 1674 aa28.6■■■□□ 2.17
LPCAT4-201ENST00000314891 CFAP65Q6ZU64 1925 aaKnown RBP28.6■■■□□ 2.17
LPCAT4-201ENST00000314891 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
LPCAT4-201ENST00000314891 KIAA1210Q9ULL0 1709 aa28.59■■■□□ 2.17
LPCAT4-201ENST00000314891 HECW2Q9P2P5 1572 aa28.58■■■□□ 2.17
LPCAT4-201ENST00000314891 IFT172Q9UG01 1749 aa28.58■■■□□ 2.17
LPCAT4-201ENST00000314891 LMTK2Q8IWU2 1503 aa28.58■■■□□ 2.17
LPCAT4-201ENST00000314891 CC2D1BQ5T0F9 858 aaKnown RBP28.58■■■□□ 2.17
LPCAT4-201ENST00000314891 NLRP13Q86W25 1043 aa28.58■■■□□ 2.17
LPCAT4-201ENST00000314891 MAP3K4Q9Y6R4 1608 aa28.57■■■□□ 2.16
LPCAT4-201ENST00000314891 MLH3Q9UHC1 1453 aa28.56■■■□□ 2.16
LPCAT4-201ENST00000314891 ABCA6Q8N139 1617 aa28.55■■■□□ 2.16
LPCAT4-201ENST00000314891 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms