RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 A2MP01023 1474 aa6.81□□□□□ -1.32
POLR2B-201ENST00000314595 AHDC1Q5TGY3 1603 aaPredicted RBP6.81□□□□□ -1.32
POLR2B-201ENST00000314595 NPHP4O75161 1426 aaPredicted RBP6.8□□□□□ -1.32
POLR2B-201ENST00000314595 FGD6Q6ZV73 1430 aa6.8□□□□□ -1.32
POLR2B-201ENST00000314595 COL16A1Q07092 1604 aaPredicted RBP6.8□□□□□ -1.32
POLR2B-201ENST00000314595 MAP3K1Q13233 1512 aa6.8□□□□□ -1.32
POLR2B-201ENST00000314595 LAMC1P11047 1609 aa6.79□□□□□ -1.32
POLR2B-201ENST00000314595 UGGT1Q9NYU2 1555 aa6.79□□□□□ -1.32
POLR2B-201ENST00000314595 CEBPAP49715 358 aaPredicted RBP6.79□□□□□ -1.32
POLR2B-201ENST00000314595 NKTRP30414 1462 aaKnown RBP6.79□□□□□ -1.32
POLR2B-201ENST00000314595 ROBO1Q9Y6N7 1651 aa6.79□□□□□ -1.32
POLR2B-201ENST00000314595 NCOA3Q9Y6Q9 1424 aa6.79□□□□□ -1.32
POLR2B-201ENST00000314595 MAST1Q9Y2H9 1570 aa6.79□□□□□ -1.32
POLR2B-201ENST00000314595 NCKAP5LQ9HCH0 1330 aa6.78□□□□□ -1.32
POLR2B-201ENST00000314595 TIAM1Q13009 1591 aa6.77□□□□□ -1.32
POLR2B-201ENST00000314595 DIP2AQ14689 1571 aa6.77□□□□□ -1.32
POLR2B-201ENST00000314595 NCOA2Q15596 1464 aa6.77□□□□□ -1.33
POLR2B-201ENST00000314595 CHIC1Q5VXU3 224 aa6.77□□□□□ -1.33
POLR2B-201ENST00000314595 TTBK1Q5TCY1 1321 aaPredicted RBP6.77□□□□□ -1.33
POLR2B-201ENST00000314595 PHLPP1O60346 1717 aa6.76□□□□□ -1.33
POLR2B-201ENST00000314595 SYCP2Q9BX26 1530 aa6.76□□□□□ -1.33
POLR2B-201ENST00000314595 SCAF1Q9H7N4 1312 aaKnown RBP6.76□□□□□ -1.33
POLR2B-201ENST00000314595 GPATCH8Q9UKJ3 1502 aaKnown RBP6.76□□□□□ -1.33
POLR2B-201ENST00000314595 TET3O43151 1660 aa6.76□□□□□ -1.33
POLR2B-201ENST00000314595 ARHGEF5Q12774 1597 aa6.76□□□□□ -1.33
POLR2B-201ENST00000314595 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
POLR2B-201ENST00000314595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.75□□□□□ -1.33
POLR2B-201ENST00000314595 TNRQ92752 1358 aa6.75□□□□□ -1.33
POLR2B-201ENST00000314595 PHF23Q9BUL5 403 aaPredicted RBP6.75□□□□□ -1.33
POLR2B-201ENST00000314595 SPHKAPQ2M3C7 1700 aa6.74□□□□□ -1.33
POLR2B-201ENST00000314595 MROH1Q8NDA8 1641 aa6.74□□□□□ -1.33
POLR2B-201ENST00000314595 ARHGAP31Q2M1Z3 1444 aa6.74□□□□□ -1.33
POLR2B-201ENST00000314595 CASKIN1Q8WXD9 1431 aa6.74□□□□□ -1.33
POLR2B-201ENST00000314595 FYCO1Q9BQS8 1478 aa6.74□□□□□ -1.33
POLR2B-201ENST00000314595 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
POLR2B-201ENST00000314595 MIA2Q96PC5 1412 aa6.73□□□□□ -1.33
POLR2B-201ENST00000314595 PRDM15P57071 1507 aaPredicted RBP6.73□□□□□ -1.33
POLR2B-201ENST00000314595 MBD5Q9P267 1494 aa6.73□□□□□ -1.33
POLR2B-201ENST00000314595 SCAF11Q99590 1463 aaKnown RBP6.72□□□□□ -1.33
POLR2B-201ENST00000314595 ARHGAP35Q9NRY4 1499 aa6.72□□□□□ -1.33
POLR2B-201ENST00000314595 CHD2O14647 1828 aaKnown RBP6.72□□□□□ -1.33
POLR2B-201ENST00000314595 DHX29Q7Z478 1369 aaKnown RBP6.72□□□□□ -1.33
POLR2B-201ENST00000314595 ERVK-7P63135 1459 aa6.71□□□□□ -1.33
POLR2B-201ENST00000314595 MLECQ14165 292 aa6.71□□□□□ -1.33
POLR2B-201ENST00000314595 PTPN23Q9H3S7 1636 aa6.71□□□□□ -1.34
POLR2B-201ENST00000314595 SPATA31A6Q5VVP1 1343 aa6.71□□□□□ -1.34
POLR2B-201ENST00000314595 AFAP1Q8N556 730 aa6.71□□□□□ -1.34
POLR2B-201ENST00000314595 LMTK2Q8IWU2 1503 aa6.7□□□□□ -1.34
POLR2B-201ENST00000314595 POTEAQ6S8J7 498 aa6.7□□□□□ -1.34
POLR2B-201ENST00000314595 UPF1Q92900 1129 aaKnown RBP eCLIP6.7□□□□□ -1.34
POLR2B-201ENST00000314595 ESF1Q9H501 851 aaKnown RBP6.7□□□□□ -1.34
POLR2B-201ENST00000314595 JCADQ9P266 1359 aa6.7□□□□□ -1.34
POLR2B-201ENST00000314595 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.7□□□□□ -1.34
POLR2B-201ENST00000314595 ANKLE2Q86XL3 938 aa6.69□□□□□ -1.34
POLR2B-201ENST00000314595 PPARGC1BQ86YN6 1023 aaKnown RBP6.69□□□□□ -1.34
POLR2B-201ENST00000314595 COL22A1Q8NFW1 1626 aaPredicted RBP6.69□□□□□ -1.34
POLR2B-201ENST00000314595 UNC13BO14795 1591 aa6.69□□□□□ -1.34
POLR2B-201ENST00000314595 THEMISQ8N1K5 641 aaPredicted RBP6.68□□□□□ -1.34
POLR2B-201ENST00000314595 LRP6O75581 1613 aa6.68□□□□□ -1.34
POLR2B-201ENST00000314595 DCCP43146 1447 aa6.67□□□□□ -1.34
POLR2B-201ENST00000314595 FOXD1Q16676 465 aa6.66□□□□□ -1.34
POLR2B-201ENST00000314595 ZNF772Q68DY9 489 aaPredicted RBP6.65□□□□□ -1.34
POLR2B-201ENST00000314595 CEP152O94986 1710 aa6.65□□□□□ -1.34
POLR2B-201ENST00000314595 EHBP1L1Q8N3D4 1523 aa6.65□□□□□ -1.34
POLR2B-201ENST00000314595 SPAG9O60271 1321 aaKnown RBP6.65□□□□□ -1.34
POLR2B-201ENST00000314595 CCDC141Q6ZP82 1450 aa6.65□□□□□ -1.34
POLR2B-201ENST00000314595 MARF1Q9Y4F3 1742 aaKnown RBP6.65□□□□□ -1.34
POLR2B-201ENST00000314595 CSRNP3Q8WYN3 585 aa6.65□□□□□ -1.34
POLR2B-201ENST00000314595 PIK3C2BO00750 1634 aa6.65□□□□□ -1.34
POLR2B-201ENST00000314595 ADGRB3O60242 1522 aa6.64□□□□□ -1.35
POLR2B-201ENST00000314595 SETD5Q9C0A6 1442 aa6.64□□□□□ -1.35
POLR2B-201ENST00000314595 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
POLR2B-201ENST00000314595 EFCAB6Q5THR3 1501 aa6.64□□□□□ -1.35
POLR2B-201ENST00000314595 CROCC2H7BZ55 1655 aa6.63□□□□□ -1.35
POLR2B-201ENST00000314595 PRAG1Q86YV5 1406 aa6.63□□□□□ -1.35
POLR2B-201ENST00000314595 RSPH4AQ5TD94 716 aa6.63□□□□□ -1.35
POLR2B-201ENST00000314595 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.62□□□□□ -1.35
POLR2B-201ENST00000314595 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
POLR2B-201ENST00000314595 XRN1Q8IZH2 1706 aaKnown RBP6.62□□□□□ -1.35
POLR2B-201ENST00000314595 RGS12O14924 1447 aa6.62□□□□□ -1.35
POLR2B-201ENST00000314595 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
POLR2B-201ENST00000314595 SUPT5HO00267 1087 aaKnown RBP6.61□□□□□ -1.35
POLR2B-201ENST00000314595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.61□□□□□ -1.35
POLR2B-201ENST00000314595 HNRNPUL2Q1KMD3 747 aaKnown RBP6.61□□□□□ -1.35
POLR2B-201ENST00000314595 CCDC125Q86Z20 511 aa6.61□□□□□ -1.35
POLR2B-201ENST00000314595 DUOX2Q9NRD8 1548 aa6.6□□□□□ -1.35
POLR2B-201ENST00000314595 IQGAP3Q86VI3 1631 aa6.6□□□□□ -1.35
POLR2B-201ENST00000314595 KCNA6P17658 529 aa6.6□□□□□ -1.35
POLR2B-201ENST00000314595 TMEM2Q9UHN6 1383 aa6.59□□□□□ -1.35
POLR2B-201ENST00000314595 SETBP1Q9Y6X0 1596 aa6.59□□□□□ -1.35
POLR2B-201ENST00000314595 RPRD2Q5VT52 1461 aaKnown RBP6.59□□□□□ -1.35
POLR2B-201ENST00000314595 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.35
POLR2B-201ENST00000314595 P3H3Q8IVL6 736 aa6.59□□□□□ -1.35
POLR2B-201ENST00000314595 ERBINQ96RT1 1412 aa6.59□□□□□ -1.35
POLR2B-201ENST00000314595 ZFYVE9O95405 1425 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 PTCH1Q13635 1447 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 BCL9LQ86UU0 1499 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 ARID3CA6NKF2 412 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 ZEB1P37275 1124 aaPredicted RBP6.58□□□□□ -1.36
POLR2B-201ENST00000314595 PLPPR3Q6T4P5 718 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms