RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 FGD1P98174 961 aa11.55□□□□□ -0.56
C2CD3-201ENST00000313663 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
C2CD3-201ENST00000313663 MPHOSPH9Q99550 1183 aa11.54□□□□□ -0.56
C2CD3-201ENST00000313663 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-201ENST00000313663 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
C2CD3-201ENST00000313663 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
C2CD3-201ENST00000313663 NCOA1Q15788 1441 aa11.54□□□□□ -0.56
C2CD3-201ENST00000313663 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
C2CD3-201ENST00000313663 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
C2CD3-201ENST00000313663 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.56
C2CD3-201ENST00000313663 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
C2CD3-201ENST00000313663 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.57
C2CD3-201ENST00000313663 MS4A1P11836 297 aa11.51□□□□□ -0.57
C2CD3-201ENST00000313663 KCNJ4P48050 445 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 C9orf84Q5VXU9 1444 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
C2CD3-201ENST00000313663 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 PNNQ9H307 717 aaKnown RBP11.5□□□□□ -0.57
C2CD3-201ENST00000313663 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
C2CD3-201ENST00000313663 MLECQ14165 292 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
C2CD3-201ENST00000313663 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
C2CD3-201ENST00000313663 SHANK2Q9UPX8 1470 aa11.49□□□□□ -0.57
C2CD3-201ENST00000313663 EFCAB2Q5VUJ9 269 aa11.49□□□□□ -0.57
C2CD3-201ENST00000313663 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
C2CD3-201ENST00000313663 KDM6BO15054 1643 aa11.48□□□□□ -0.57
C2CD3-201ENST00000313663 MIER1Q8N108 512 aa11.48□□□□□ -0.57
C2CD3-201ENST00000313663 CCDC141Q6ZP82 1450 aa11.47□□□□□ -0.57
C2CD3-201ENST00000313663 KIF15Q9NS87 1388 aa11.47□□□□□ -0.57
C2CD3-201ENST00000313663 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-201ENST00000313663 FOXD1Q16676 465 aa11.47□□□□□ -0.57
C2CD3-201ENST00000313663 NRDCO43847 1150 aa11.47□□□□□ -0.57
C2CD3-201ENST00000313663 PLEKHH2Q8IVE3 1493 aa11.46□□□□□ -0.57
C2CD3-201ENST00000313663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.46□□□□□ -0.57
C2CD3-201ENST00000313663 MBD5Q9P267 1494 aa11.46□□□□□ -0.57
C2CD3-201ENST00000313663 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.57
C2CD3-201ENST00000313663 PREX2Q70Z35 1606 aa11.45□□□□□ -0.58
C2CD3-201ENST00000313663 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
C2CD3-201ENST00000313663 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
C2CD3-201ENST00000313663 SOX12O15370 315 aa11.45□□□□□ -0.58
C2CD3-201ENST00000313663 ARHGEF5Q12774 1597 aa11.44□□□□□ -0.58
C2CD3-201ENST00000313663 PLCH2O75038 1416 aa11.44□□□□□ -0.58
C2CD3-201ENST00000313663 NUP155O75694 1391 aa11.44□□□□□ -0.58
C2CD3-201ENST00000313663 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
C2CD3-201ENST00000313663 KIAA1107Q9UPP5 1409 aa11.44□□□□□ -0.58
C2CD3-201ENST00000313663 DENND4BO75064 1496 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-201ENST00000313663 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
C2CD3-201ENST00000313663 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-201ENST00000313663 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 SAMD9LQ8IVG5 1584 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 KANK1Q14678 1352 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 ANKRD30BQ9BXX2 1392 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 PKD2Q13563 968 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 SENP3-EIF4A1A0A087X0R7 540 aa11.43□□□□□ -0.58
C2CD3-201ENST00000313663 DNTTIP2Q5QJE6 756 aaKnown RBP11.43□□□□□ -0.58
C2CD3-201ENST00000313663 SYCP2Q9BX26 1530 aa11.42□□□□□ -0.58
C2CD3-201ENST00000313663 ISY1Q9ULR0 285 aaKnown RBP11.42□□□□□ -0.58
C2CD3-201ENST00000313663 TPRNQ4KMQ1 711 aa11.42□□□□□ -0.58
C2CD3-201ENST00000313663 CROCC2H7BZ55 1655 aa11.42□□□□□ -0.58
C2CD3-201ENST00000313663 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
C2CD3-201ENST00000313663 TMF1P82094 1093 aa11.42□□□□□ -0.58
C2CD3-201ENST00000313663 WDR7Q9Y4E6 1490 aa11.41□□□□□ -0.58
C2CD3-201ENST00000313663 RGS3P49796 1198 aa11.41□□□□□ -0.58
C2CD3-201ENST00000313663 GGT6Q6P531 493 aa11.41□□□□□ -0.58
C2CD3-201ENST00000313663 L3MBTL2Q969R5 705 aa11.41□□□□□ -0.58
C2CD3-201ENST00000313663 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
C2CD3-201ENST00000313663 CDC42BPBQ9Y5S2 1711 aa11.4□□□□□ -0.58
C2CD3-201ENST00000313663 CHMP4AQ9BY43 222 aa11.4□□□□□ -0.58
C2CD3-201ENST00000313663 PZPP20742 1482 aa11.4□□□□□ -0.58
C2CD3-201ENST00000313663 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
C2CD3-201ENST00000313663 MYO5CQ9NQX4 1742 aa11.39□□□□□ -0.59
C2CD3-201ENST00000313663 RPRD2Q5VT52 1461 aaKnown RBP11.39□□□□□ -0.59
C2CD3-201ENST00000313663 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
C2CD3-201ENST00000313663 CSB-PGBD3P0DP91 1061 aa11.38□□□□□ -0.59
C2CD3-201ENST00000313663 DCAF11Q8TEB1 546 aa11.38□□□□□ -0.59
C2CD3-201ENST00000313663 ASXL2Q76L83 1435 aa11.37□□□□□ -0.59
C2CD3-201ENST00000313663 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
C2CD3-201ENST00000313663 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
C2CD3-201ENST00000313663 SAFB2Q14151 953 aaKnown RBP eCLIP11.37□□□□□ -0.59
C2CD3-201ENST00000313663 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
C2CD3-201ENST00000313663 CC2D1BQ5T0F9 858 aaKnown RBP11.36□□□□□ -0.59
C2CD3-201ENST00000313663 CLSTN1O94985 981 aa11.36□□□□□ -0.59
C2CD3-201ENST00000313663 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
C2CD3-201ENST00000313663 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
C2CD3-201ENST00000313663 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
C2CD3-201ENST00000313663 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
C2CD3-201ENST00000313663 ARID3AQ99856 593 aa11.35□□□□□ -0.59
C2CD3-201ENST00000313663 AFAP1Q8N556 730 aa11.35□□□□□ -0.59
C2CD3-201ENST00000313663 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
C2CD3-201ENST00000313663 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
C2CD3-201ENST00000313663 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
C2CD3-201ENST00000313663 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
C2CD3-201ENST00000313663 MCCP23508 829 aa11.34□□□□□ -0.59
C2CD3-201ENST00000313663 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
C2CD3-201ENST00000313663 FANCAO15360 1455 aa11.34□□□□□ -0.59
C2CD3-201ENST00000313663 TRAPPC8Q9Y2L5 1435 aa11.34□□□□□ -0.59
C2CD3-201ENST00000313663 MAST1Q9Y2H9 1570 aa11.34□□□□□ -0.59
C2CD3-201ENST00000313663 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
C2CD3-201ENST00000313663 ABCC1P33527 1531 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms