RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 MYOM3Q5VTT5 1437 aa13.37□□□□□ -0.27
MSL3-201ENST00000312196 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
MSL3-201ENST00000312196 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
MSL3-201ENST00000312196 KDM5DQ9BY66 1539 aa13.35□□□□□ -0.27
MSL3-201ENST00000312196 ZC3H13Q5T200 1668 aaKnown RBP13.35□□□□□ -0.27
MSL3-201ENST00000312196 PZPP20742 1482 aa13.34□□□□□ -0.27
MSL3-201ENST00000312196 NLRP1Q9C000 1473 aa13.33□□□□□ -0.27
MSL3-201ENST00000312196 CPS1P31327 1500 aa13.33□□□□□ -0.28
MSL3-201ENST00000312196 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
MSL3-201ENST00000312196 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
MSL3-201ENST00000312196 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
MSL3-201ENST00000312196 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
MSL3-201ENST00000312196 MED14O60244 1454 aa13.31□□□□□ -0.28
MSL3-201ENST00000312196 DNMT1P26358 1616 aaKnown RBP13.3□□□□□ -0.28
MSL3-201ENST00000312196 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
MSL3-201ENST00000312196 LOC105371045A0A1W2PR82 267 aa13.29□□□□□ -0.28
MSL3-201ENST00000312196 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
MSL3-201ENST00000312196 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
MSL3-201ENST00000312196 TNRQ92752 1358 aa13.29□□□□□ -0.28
MSL3-201ENST00000312196 SPATA31D1Q6ZQQ2 1576 aa13.28□□□□□ -0.28
MSL3-201ENST00000312196 PTPN23Q9H3S7 1636 aa13.27□□□□□ -0.28
MSL3-201ENST00000312196 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
MSL3-201ENST00000312196 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
MSL3-201ENST00000312196 SOCS7O14512 581 aa13.26□□□□□ -0.29
MSL3-201ENST00000312196 KANK4Q5T7N3 995 aaPredicted RBP13.25□□□□□ -0.29
MSL3-201ENST00000312196 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
MSL3-201ENST00000312196 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
MSL3-201ENST00000312196 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
MSL3-201ENST00000312196 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
MSL3-201ENST00000312196 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
MSL3-201ENST00000312196 ABCC3O15438 1527 aa13.24□□□□□ -0.29
MSL3-201ENST00000312196 ABCC5O15440 1437 aa13.24□□□□□ -0.29
MSL3-201ENST00000312196 GGT6Q6P531 493 aa13.24□□□□□ -0.29
MSL3-201ENST00000312196 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
MSL3-201ENST00000312196 PRDM15P57071 1507 aaPredicted RBP13.24□□□□□ -0.29
MSL3-201ENST00000312196 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
MSL3-201ENST00000312196 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
MSL3-201ENST00000312196 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
MSL3-201ENST00000312196 APLP2Q06481 763 aa13.23□□□□□ -0.29
MSL3-201ENST00000312196 DAPK1P53355 1430 aa13.21□□□□□ -0.29
MSL3-201ENST00000312196 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
MSL3-201ENST00000312196 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.3
MSL3-201ENST00000312196 KIF3BO15066 747 aa13.21□□□□□ -0.3
MSL3-201ENST00000312196 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
MSL3-201ENST00000312196 ZNF335Q9H4Z2 1342 aaPredicted RBP13.2□□□□□ -0.3
MSL3-201ENST00000312196 SYNMO15061 1565 aa13.19□□□□□ -0.3
MSL3-201ENST00000312196 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
MSL3-201ENST00000312196 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
MSL3-201ENST00000312196 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
MSL3-201ENST00000312196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
MSL3-201ENST00000312196 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
MSL3-201ENST00000312196 TOM1O60784 492 aa13.17□□□□□ -0.3
MSL3-201ENST00000312196 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
MSL3-201ENST00000312196 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
MSL3-201ENST00000312196 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
MSL3-201ENST00000312196 SLIT1O75093 1534 aa13.16□□□□□ -0.3
MSL3-201ENST00000312196 KIF15Q9NS87 1388 aa13.16□□□□□ -0.3
MSL3-201ENST00000312196 IQGAP1P46940 1657 aa13.14□□□□□ -0.31
MSL3-201ENST00000312196 CEP152O94986 1710 aa13.14□□□□□ -0.31
MSL3-201ENST00000312196 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
MSL3-201ENST00000312196 ROCK1Q13464 1354 aa13.13□□□□□ -0.31
MSL3-201ENST00000312196 KANK1Q14678 1352 aa13.12□□□□□ -0.31
MSL3-201ENST00000312196 FBXO31Q5XUX0 539 aaPredicted RBP13.12□□□□□ -0.31
MSL3-201ENST00000312196 RPRD2Q5VT52 1461 aaKnown RBP13.11□□□□□ -0.31
MSL3-201ENST00000312196 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
MSL3-201ENST00000312196 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
MSL3-201ENST00000312196 UNC13BO14795 1591 aa13.1□□□□□ -0.31
MSL3-201ENST00000312196 EFCAB6Q5THR3 1501 aa13.09□□□□□ -0.31
MSL3-201ENST00000312196 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
MSL3-201ENST00000312196 ALKQ9UM73 1620 aa13.08□□□□□ -0.31
MSL3-201ENST00000312196 NOS1P29475 1434 aa13.08□□□□□ -0.32
MSL3-201ENST00000312196 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
MSL3-201ENST00000312196 TET3O43151 1660 aa13.07□□□□□ -0.32
MSL3-201ENST00000312196 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
MSL3-201ENST00000312196 ANKRD50Q9ULJ7 1429 aa13.04□□□□□ -0.32
MSL3-201ENST00000312196 HSPA1LP34931 641 aa13.03□□□□□ -0.32
MSL3-201ENST00000312196 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
MSL3-201ENST00000312196 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
MSL3-201ENST00000312196 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.32
MSL3-201ENST00000312196 EID1Q9Y6B2 187 aa13.02□□□□□ -0.32
MSL3-201ENST00000312196 TMEM2Q9UHN6 1383 aa13.02□□□□□ -0.32
MSL3-201ENST00000312196 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
MSL3-201ENST00000312196 STRCP1A6NGW2 1772 aa13.02□□□□□ -0.33
MSL3-201ENST00000312196 NCOA3Q9Y6Q9 1424 aa13.02□□□□□ -0.33
MSL3-201ENST00000312196 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
MSL3-201ENST00000312196 NWD1Q149M9 1564 aa13.01□□□□□ -0.33
MSL3-201ENST00000312196 SLC52A1Q9NWF4 448 aa13.01□□□□□ -0.33
MSL3-201ENST00000312196 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
MSL3-201ENST00000312196 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
MSL3-201ENST00000312196 TXNDC2Q86VQ3 553 aa12.98□□□□□ -0.33
MSL3-201ENST00000312196 KCNA6P17658 529 aa12.97□□□□□ -0.33
MSL3-201ENST00000312196 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
MSL3-201ENST00000312196 LTKP29376 864 aa12.96□□□□□ -0.34
MSL3-201ENST00000312196 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
MSL3-201ENST00000312196 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
MSL3-201ENST00000312196 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
MSL3-201ENST00000312196 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
MSL3-201ENST00000312196 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
MSL3-201ENST00000312196 E9PCH4 1651 aa12.94□□□□□ -0.34
MSL3-201ENST00000312196 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms