RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 FRMPD1Q5SYB0 1578 aa32.68■■■□□ 2.82
IRF3-201ENST00000309877 KIF3BO15066 747 aa32.68■■■□□ 2.82
IRF3-201ENST00000309877 TRHP20396 242 aaPredicted RBP32.68■■■□□ 2.82
IRF3-201ENST00000309877 TIMELESSQ9UNS1 1208 aa32.67■■■□□ 2.82
IRF3-201ENST00000309877 MAGI2Q86UL8 1455 aa32.66■■■□□ 2.82
IRF3-201ENST00000309877 ANKRD30BQ9BXX2 1392 aa32.66■■■□□ 2.82
IRF3-201ENST00000309877 EIF2AK4Q9P2K8 1649 aaKnown RBP32.66■■■□□ 2.82
IRF3-201ENST00000309877 ABCA6Q8N139 1617 aa32.65■■■□□ 2.82
IRF3-201ENST00000309877 ZMYM4Q5VZL5 1548 aa32.64■■■□□ 2.81
IRF3-201ENST00000309877 IQGAP3Q86VI3 1631 aa32.62■■■□□ 2.81
IRF3-201ENST00000309877 DIP2CQ9Y2E4 1556 aa32.6■■■□□ 2.81
IRF3-201ENST00000309877 KANK1Q14678 1352 aa32.6■■■□□ 2.81
IRF3-201ENST00000309877 TONSLQ96HA7 1378 aa32.59■■■□□ 2.81
IRF3-201ENST00000309877 YEATS2Q9ULM3 1422 aa32.58■■■□□ 2.81
IRF3-201ENST00000309877 DEPDC5O75140 1603 aa32.58■■■□□ 2.81
IRF3-201ENST00000309877 COL17A1Q9UMD9 1497 aaPredicted RBP32.55■■■□□ 2.8
IRF3-201ENST00000309877 PRDM15P57071 1507 aaPredicted RBP32.5■■■□□ 2.79
IRF3-201ENST00000309877 ATP10AO60312 1499 aa32.48■■■□□ 2.79
IRF3-201ENST00000309877 RPRD2Q5VT52 1461 aaKnown RBP32.48■■■□□ 2.79
IRF3-201ENST00000309877 RNF17Q9BXT8 1623 aaKnown RBP32.47■■■□□ 2.79
IRF3-201ENST00000309877 MROH1Q8NDA8 1641 aa32.47■■■□□ 2.79
IRF3-201ENST00000309877 GGT6Q6P531 493 aa32.46■■■□□ 2.79
IRF3-201ENST00000309877 VWDEQ8N2E2 1590 aa32.46■■■□□ 2.79
IRF3-201ENST00000309877 BCORL1Q5H9F3 1711 aa32.45■■■□□ 2.79
IRF3-201ENST00000309877 PPP1R15AO75807 674 aaPredicted RBP32.43■■■□□ 2.78
IRF3-201ENST00000309877 TET3O43151 1660 aa32.4■■■□□ 2.78
IRF3-201ENST00000309877 REREQ9P2R6 1566 aa32.36■■■□□ 2.77
IRF3-201ENST00000309877 ARHGEF40Q8TER5 1519 aa32.36■■■□□ 2.77
IRF3-201ENST00000309877 L3MBTL2Q969R5 705 aa32.35■■■□□ 2.77
IRF3-201ENST00000309877 LMTK2Q8IWU2 1503 aa32.35■■■□□ 2.77
IRF3-201ENST00000309877 WASHC2CQ9Y4E1 1318 aa32.35■■■□□ 2.77
IRF3-201ENST00000309877 CCDC144AA2RUR9 1427 aa32.34■■■□□ 2.77
IRF3-201ENST00000309877 E9PCH4 1651 aa32.34■■■□□ 2.77
IRF3-201ENST00000309877 PLA2R1Q13018 1463 aa32.33■■■□□ 2.77
IRF3-201ENST00000309877 AGLP35573 1532 aa32.3■■■□□ 2.76
IRF3-201ENST00000309877 EFCAB6Q5THR3 1501 aa32.29■■■□□ 2.76
IRF3-201ENST00000309877 CEP152O94986 1710 aa32.28■■■□□ 2.76
IRF3-201ENST00000309877 ABCC3O15438 1527 aa32.27■■■□□ 2.76
IRF3-201ENST00000309877 PTPRTO14522 1441 aa32.25■■■□□ 2.75
IRF3-201ENST00000309877 ZNF316A6NFI3 1004 aaPredicted RBP32.22■■■□□ 2.75
IRF3-201ENST00000309877 TRPM2O94759 1503 aa32.22■■■□□ 2.75
IRF3-201ENST00000309877 SPHKAPQ2M3C7 1700 aa32.2■■■□□ 2.75
IRF3-201ENST00000309877 PPP6R1Q9UPN7 881 aa32.2■■■□□ 2.74
IRF3-201ENST00000309877 ZC3H13Q5T200 1668 aaKnown RBP32.19■■■□□ 2.74
IRF3-201ENST00000309877 NPATQ14207 1427 aa32.17■■■□□ 2.74
IRF3-201ENST00000309877 CAMSAP1Q5T5Y3 1602 aa32.16■■■□□ 2.74
IRF3-201ENST00000309877 SIGLEC1Q9BZZ2 1709 aa32.15■■■□□ 2.74
IRF3-201ENST00000309877 MLECQ14165 292 aa32.15■■■□□ 2.74
IRF3-201ENST00000309877 ARID4BQ4LE39 1312 aaPredicted RBP32.14■■■□□ 2.74
IRF3-201ENST00000309877 RGL3Q3MIN7 710 aa32.12■■■□□ 2.73
IRF3-201ENST00000309877 ARHGAP31Q2M1Z3 1444 aa32.11■■■□□ 2.73
IRF3-201ENST00000309877 DCAF11Q8TEB1 546 aa32.09■■■□□ 2.73
IRF3-201ENST00000309877 CLTCL1P53675 1640 aa32.08■■■□□ 2.73
IRF3-201ENST00000309877 NBPF8Q3BBV2 869 aa32.08■■■□□ 2.73
IRF3-201ENST00000309877 KDM2AQ9Y2K7 1162 aa32.07■■■□□ 2.72
IRF3-201ENST00000309877 CNTLNQ9NXG0 1405 aa32.06■■■□□ 2.72
IRF3-201ENST00000309877 ESF1Q9H501 851 aaKnown RBP32.05■■■□□ 2.72
IRF3-201ENST00000309877 ZNF326Q5BKZ1 582 aaKnown RBP32.05■■■□□ 2.72
IRF3-201ENST00000309877 SPATA31E1Q6ZUB1 1445 aa32.04■■■□□ 2.72
IRF3-201ENST00000309877 NOS1P29475 1434 aa32.02■■■□□ 2.72
IRF3-201ENST00000309877 UGGT1Q9NYU2 1555 aa32.01■■■□□ 2.71
IRF3-201ENST00000309877 UHRF1BP1Q6BDS2 1440 aa32■■■□□ 2.71
IRF3-201ENST00000309877 CLTCQ00610 1675 aaKnown RBP31.98■■■□□ 2.71
IRF3-201ENST00000309877 CFAP65Q6ZU64 1925 aaKnown RBP31.98■■■□□ 2.71
IRF3-201ENST00000309877 NEURL4Q96JN8 1562 aa31.94■■■□□ 2.7
IRF3-201ENST00000309877 CHGAP10645 457 aaKnown RBP31.92■■■□□ 2.7
IRF3-201ENST00000309877 KIF1BO60333 1816 aa31.92■■■□□ 2.7
IRF3-201ENST00000309877 STAC3Q96MF2 364 aa31.91■■■□□ 2.7
IRF3-201ENST00000309877 SLC52A1Q9NWF4 448 aa31.91■■■□□ 2.7
IRF3-201ENST00000309877 SYNMO15061 1565 aa31.91■■■□□ 2.7
IRF3-201ENST00000309877 PREX1Q8TCU6 1659 aa31.9■■■□□ 2.7
IRF3-201ENST00000309877 FBXO31Q5XUX0 539 aaPredicted RBP31.9■■■□□ 2.7
IRF3-201ENST00000309877 PRAG1Q86YV5 1406 aa31.89■■■□□ 2.7
IRF3-201ENST00000309877 ERVK-7P63135 1459 aa31.89■■■□□ 2.69
IRF3-201ENST00000309877 ZMYM3Q14202 1370 aa31.88■■■□□ 2.69
IRF3-201ENST00000309877 EIF4G2P78344 907 aaKnown RBP eCLIP31.87■■■□□ 2.692e-7■■■■■ 34.3
IRF3-201ENST00000309877 RALGAPBQ86X10 1494 aa31.85■■■□□ 2.69
IRF3-201ENST00000309877 PIK3C2BO00750 1634 aa31.85■■■□□ 2.69
IRF3-201ENST00000309877 HIRIP3Q9BW71 556 aaPredicted RBP31.85■■■□□ 2.69
IRF3-201ENST00000309877 ADGRB3O60242 1522 aa31.85■■■□□ 2.69
IRF3-201ENST00000309877 IDI1Q13907 227 aa31.84■■■□□ 2.69
IRF3-201ENST00000309877 HSPA5P11021 654 aaKnown RBP31.82■■■□□ 2.68
IRF3-201ENST00000309877 DIEXFQ68CQ4 756 aaKnown RBP31.81■■■□□ 2.68
IRF3-201ENST00000309877 MROH2AA6NES4 1674 aa31.8■■■□□ 2.68
IRF3-201ENST00000309877 SPATA31D1Q6ZQQ2 1576 aa31.79■■■□□ 2.68
IRF3-201ENST00000309877 CARD11Q9BXL7 1154 aa31.78■■■□□ 2.68
IRF3-201ENST00000309877 ROCK2O75116 1388 aaKnown RBP31.78■■■□□ 2.68
IRF3-201ENST00000309877 RPGRIP1LQ68CZ1 1315 aa31.77■■■□□ 2.68
IRF3-201ENST00000309877 TRPM1Q7Z4N2 1603 aa31.74■■■□□ 2.67
IRF3-201ENST00000309877 MYOM2P54296 1465 aa31.73■■■□□ 2.67
IRF3-201ENST00000309877 MADDQ8WXG6 1647 aa31.72■■■□□ 2.67
IRF3-201ENST00000309877 STAG3Q9UJ98 1225 aa31.71■■■□□ 2.67
IRF3-201ENST00000309877 USP47Q96K76 1375 aa31.71■■■□□ 2.67
IRF3-201ENST00000309877 NBPF1Q3BBV0 1214 aa31.7■■■□□ 2.66
IRF3-201ENST00000309877 IFT172Q9UG01 1749 aa31.69■■■□□ 2.66
IRF3-201ENST00000309877 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
IRF3-201ENST00000309877 ADGRF5Q8IZF2 1346 aa31.68■■■□□ 2.66
IRF3-201ENST00000309877 TNRQ92752 1358 aa31.68■■■□□ 2.66
IRF3-201ENST00000309877 GPRASP1Q5JY77 1395 aa31.67■■■□□ 2.66
IRF3-201ENST00000309877 TMEM131LA2VDJ0 1609 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms