RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 UHRF1BP1LA0JNW5 1464 aa27.23■■□□□ 1.95
LRFN4-201ENST00000309602 FAM9BQ8IZU0 186 aa27.22■■□□□ 1.95
LRFN4-201ENST00000309602 PLCH2O75038 1416 aa27.21■■□□□ 1.95
LRFN4-201ENST00000309602 TSHZ2Q9NRE2 1034 aa27.21■■□□□ 1.95
LRFN4-201ENST00000309602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.2■■□□□ 1.94
LRFN4-201ENST00000309602 CCDC144AA2RUR9 1427 aa27.19■■□□□ 1.94
LRFN4-201ENST00000309602 PLA2R1Q13018 1463 aa27.19■■□□□ 1.94
LRFN4-201ENST00000309602 IQGAP3Q86VI3 1631 aa27.17■■□□□ 1.94
LRFN4-201ENST00000309602 DUOX2Q9NRD8 1548 aa27.17■■□□□ 1.94
LRFN4-201ENST00000309602 ST20-MTHFSA0A0A6YYL1 179 aa27.15■■□□□ 1.94
LRFN4-201ENST00000309602 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
LRFN4-201ENST00000309602 ABCC1P33527 1531 aa27.13■■□□□ 1.93
LRFN4-201ENST00000309602 ROCK2O75116 1388 aaKnown RBP27.13■■□□□ 1.93
LRFN4-201ENST00000309602 PRAG1Q86YV5 1406 aa27.12■■□□□ 1.93
LRFN4-201ENST00000309602 ERBINQ96RT1 1412 aa27.12■■□□□ 1.93
LRFN4-201ENST00000309602 MAGI2Q86UL8 1455 aa27.11■■□□□ 1.93
LRFN4-201ENST00000309602 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
LRFN4-201ENST00000309602 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
LRFN4-201ENST00000309602 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
LRFN4-201ENST00000309602 RGL3Q3MIN7 710 aa27.1■■□□□ 1.93
LRFN4-201ENST00000309602 TRPM1Q7Z4N2 1603 aa27.1■■□□□ 1.93
LRFN4-201ENST00000309602 ZBED9Q6R2W3 1325 aa27.09■■□□□ 1.93
LRFN4-201ENST00000309602 A2MP01023 1474 aa27.08■■□□□ 1.93
LRFN4-201ENST00000309602 ATP10AO60312 1499 aa27.03■■□□□ 1.92
LRFN4-201ENST00000309602 IRX6P78412 446 aaPredicted RBP27.02■■□□□ 1.92
LRFN4-201ENST00000309602 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
LRFN4-201ENST00000309602 GPRASP1Q5JY77 1395 aa27■■□□□ 1.91
LRFN4-201ENST00000309602 ARAP3Q8WWN8 1544 aa27■■□□□ 1.91
LRFN4-201ENST00000309602 E9PCH4 1651 aa26.98■■□□□ 1.91
LRFN4-201ENST00000309602 SPAG9O60271 1321 aaKnown RBP26.98■■□□□ 1.91
LRFN4-201ENST00000309602 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
LRFN4-201ENST00000309602 ZFYVE16Q7Z3T8 1539 aa26.96■■□□□ 1.91
LRFN4-201ENST00000309602 RTEL1-TNFRSF6BF6WH68 1400 aa26.95■■□□□ 1.9
LRFN4-201ENST00000309602 WDR7Q9Y4E6 1490 aa26.95■■□□□ 1.9
LRFN4-201ENST00000309602 LAMC1P11047 1609 aa26.94■■□□□ 1.9
LRFN4-201ENST00000309602 PRDM15P57071 1507 aaPredicted RBP26.93■■□□□ 1.9
LRFN4-201ENST00000309602 EIF2AK4Q9P2K8 1649 aaKnown RBP26.92■■□□□ 1.9
LRFN4-201ENST00000309602 PNISRQ8TF01 805 aaKnown RBP26.9■■□□□ 1.9
LRFN4-201ENST00000309602 TMC1Q8TDI8 760 aa26.88■■□□□ 1.89
LRFN4-201ENST00000309602 ABCA9Q8IUA7 1624 aa26.88■■□□□ 1.89
LRFN4-201ENST00000309602 KTN1Q86UP2 1357 aaKnown RBP26.87■■□□□ 1.89
LRFN4-201ENST00000309602 FANCAO15360 1455 aa26.87■■□□□ 1.89
LRFN4-201ENST00000309602 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
LRFN4-201ENST00000309602 ERICH6BQ5W0A0 696 aa26.87■■□□□ 1.89
LRFN4-201ENST00000309602 RALBP1Q15311 655 aa26.86■■□□□ 1.89
LRFN4-201ENST00000309602 TESK2Q96S53 571 aa26.86■■□□□ 1.89
LRFN4-201ENST00000309602 MYBBP1AQ9BQG0 1328 aaKnown RBP26.86■■□□□ 1.89
LRFN4-201ENST00000309602 DEPDC5O75140 1603 aa26.84■■□□□ 1.89
LRFN4-201ENST00000309602 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
LRFN4-201ENST00000309602 BRD4O60885 1362 aaPredicted RBP26.83■■□□□ 1.89
LRFN4-201ENST00000309602 ATP7AQ04656 1500 aa26.83■■□□□ 1.89
LRFN4-201ENST00000309602 INO80Q9ULG1 1556 aaPredicted RBP26.83■■□□□ 1.89
LRFN4-201ENST00000309602 SMG6Q86US8 1419 aaKnown RBP26.83■■□□□ 1.89
LRFN4-201ENST00000309602 TRPM2O94759 1503 aa26.82■■□□□ 1.88
LRFN4-201ENST00000309602 RNF17Q9BXT8 1623 aaKnown RBP26.82■■□□□ 1.88
LRFN4-201ENST00000309602 LRPPRCP42704 1394 aaKnown RBP26.8■■□□□ 1.88
LRFN4-201ENST00000309602 PTPRTO14522 1441 aa26.8■■□□□ 1.88
LRFN4-201ENST00000309602 PER1O15534 1290 aaPredicted RBP26.79■■□□□ 1.88
LRFN4-201ENST00000309602 PPP4R2Q9NY27 417 aa26.79■■□□□ 1.88
LRFN4-201ENST00000309602 SPHKAPQ2M3C7 1700 aa26.78■■□□□ 1.88
LRFN4-201ENST00000309602 ADGRL1O94910 1474 aa26.78■■□□□ 1.88
LRFN4-201ENST00000309602 PARD3Q8TEW0 1356 aa26.78■■□□□ 1.88
LRFN4-201ENST00000309602 ASXL2Q76L83 1435 aa26.78■■□□□ 1.88
LRFN4-201ENST00000309602 SCAPERQ9BY12 1400 aa26.78■■□□□ 1.88
LRFN4-201ENST00000309602 MADDQ8WXG6 1647 aa26.77■■□□□ 1.88
LRFN4-201ENST00000309602 SENP3-EIF4A1A0A087X0R7 540 aa26.77■■□□□ 1.88
LRFN4-201ENST00000309602 NUDCQ9Y266 331 aa26.77■■□□□ 1.88
LRFN4-201ENST00000309602 TET3O43151 1660 aa26.77■■□□□ 1.88
LRFN4-201ENST00000309602 CLTCL1P53675 1640 aa26.76■■□□□ 1.87
LRFN4-201ENST00000309602 CEP152O94986 1710 aa26.76■■□□□ 1.87
LRFN4-201ENST00000309602 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
LRFN4-201ENST00000309602 TMF1P82094 1093 aa26.74■■□□□ 1.87
LRFN4-201ENST00000309602 RBM19Q9Y4C8 960 aaKnown RBP26.74■■□□□ 1.87
LRFN4-201ENST00000309602 KANK1Q14678 1352 aa26.73■■□□□ 1.87
LRFN4-201ENST00000309602 KIF3BO15066 747 aa26.73■■□□□ 1.87
LRFN4-201ENST00000309602 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
LRFN4-201ENST00000309602 MYT1LQ9UL68 1186 aa26.72■■□□□ 1.87
LRFN4-201ENST00000309602 PANK3Q9H999 370 aa26.69■■□□□ 1.86
LRFN4-201ENST00000309602 MROH1Q8NDA8 1641 aa26.69■■□□□ 1.86
LRFN4-201ENST00000309602 IQGAP1P46940 1657 aa26.68■■□□□ 1.86
LRFN4-201ENST00000309602 WASHC2CQ9Y4E1 1318 aa26.67■■□□□ 1.86
LRFN4-201ENST00000309602 RNF123Q5XPI4 1314 aa26.65■■□□□ 1.86
LRFN4-201ENST00000309602 CC2D1BQ5T0F9 858 aaKnown RBP26.65■■□□□ 1.86
LRFN4-201ENST00000309602 STAC3Q96MF2 364 aa26.65■■□□□ 1.86
LRFN4-201ENST00000309602 B4GALNT3Q6L9W6 998 aa26.64■■□□□ 1.86
LRFN4-201ENST00000309602 KIDINS220Q9ULH0 1771 aa26.63■■□□□ 1.85
LRFN4-201ENST00000309602 SCAF11Q99590 1463 aaKnown RBP26.61■■□□□ 1.85
LRFN4-201ENST00000309602 UGGT1Q9NYU2 1555 aa26.59■■□□□ 1.85
LRFN4-201ENST00000309602 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
LRFN4-201ENST00000309602 NEURL4Q96JN8 1562 aa26.58■■□□□ 1.85
LRFN4-201ENST00000309602 ZNF518AQ6AHZ1 1483 aa26.57■■□□□ 1.84
LRFN4-201ENST00000309602 EFCAB6Q5THR3 1501 aa26.57■■□□□ 1.84
LRFN4-201ENST00000309602 NPM1P06748 294 aaKnown RBP eCLIP26.56■■□□□ 1.84
LRFN4-201ENST00000309602 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
LRFN4-201ENST00000309602 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
LRFN4-201ENST00000309602 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
LRFN4-201ENST00000309602 PPRC1Q5VV67 1664 aaKnown RBP26.54■■□□□ 1.84
LRFN4-201ENST00000309602 KIAA1210Q9ULL0 1709 aa26.53■■□□□ 1.84
LRFN4-201ENST00000309602 SALL2Q9Y467 1007 aaPredicted RBP26.51■■□□□ 1.83
LRFN4-201ENST00000309602 CD109Q6YHK3 1445 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms