RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 DEPDC5O75140 1603 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 FRMPD1Q5SYB0 1578 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 SCAF1Q9H7N4 1312 aaKnown RBP10.55□□□□□ -0.72
CLCN5-201ENST00000307367 RAPGEF3O95398 923 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 SIN3AQ96ST3 1273 aa10.55□□□□□ -0.72
CLCN5-201ENST00000307367 ABCA6Q8N139 1617 aa10.54□□□□□ -0.72
CLCN5-201ENST00000307367 A2MP01023 1474 aa10.54□□□□□ -0.72
CLCN5-201ENST00000307367 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
CLCN5-201ENST00000307367 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
CLCN5-201ENST00000307367 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
CLCN5-201ENST00000307367 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.72
CLCN5-201ENST00000307367 PKD2Q13563 968 aa10.52□□□□□ -0.73
CLCN5-201ENST00000307367 FOXD1Q16676 465 aa10.51□□□□□ -0.73
CLCN5-201ENST00000307367 PRDM15P57071 1507 aaPredicted RBP10.51□□□□□ -0.73
CLCN5-201ENST00000307367 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
CLCN5-201ENST00000307367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.5□□□□□ -0.73
CLCN5-201ENST00000307367 TONSLQ96HA7 1378 aa10.5□□□□□ -0.73
CLCN5-201ENST00000307367 VWDEQ8N2E2 1590 aa10.5□□□□□ -0.73
CLCN5-201ENST00000307367 KIF3BO15066 747 aa10.5□□□□□ -0.73
CLCN5-201ENST00000307367 RPRD2Q5VT52 1461 aaKnown RBP10.5□□□□□ -0.73
CLCN5-201ENST00000307367 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
CLCN5-201ENST00000307367 KANK1Q14678 1352 aa10.49□□□□□ -0.73
CLCN5-201ENST00000307367 TET3O43151 1660 aa10.48□□□□□ -0.73
CLCN5-201ENST00000307367 YEATS2Q9ULM3 1422 aa10.48□□□□□ -0.73
CLCN5-201ENST00000307367 REREQ9P2R6 1566 aa10.47□□□□□ -0.73
CLCN5-201ENST00000307367 COL17A1Q9UMD9 1497 aaPredicted RBP10.47□□□□□ -0.73
CLCN5-201ENST00000307367 E9PCH4 1651 aa10.46□□□□□ -0.73
CLCN5-201ENST00000307367 ATP10AO60312 1499 aa10.46□□□□□ -0.74
CLCN5-201ENST00000307367 LMTK2Q8IWU2 1503 aa10.46□□□□□ -0.74
CLCN5-201ENST00000307367 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
CLCN5-201ENST00000307367 TRHP20396 242 aaPredicted RBP10.45□□□□□ -0.74
CLCN5-201ENST00000307367 CEP152O94986 1710 aa10.45□□□□□ -0.74
CLCN5-201ENST00000307367 ARHGEF40Q8TER5 1519 aa10.45□□□□□ -0.74
CLCN5-201ENST00000307367 EFCAB6Q5THR3 1501 aa10.43□□□□□ -0.74
CLCN5-201ENST00000307367 SPHKAPQ2M3C7 1700 aa10.43□□□□□ -0.74
CLCN5-201ENST00000307367 ZC3H13Q5T200 1668 aaKnown RBP10.43□□□□□ -0.74
CLCN5-201ENST00000307367 AGLP35573 1532 aa10.43□□□□□ -0.74
CLCN5-201ENST00000307367 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
CLCN5-201ENST00000307367 PLA2R1Q13018 1463 aa10.42□□□□□ -0.74
CLCN5-201ENST00000307367 GGT6Q6P531 493 aa10.42□□□□□ -0.74
CLCN5-201ENST00000307367 TRPM2O94759 1503 aa10.41□□□□□ -0.74
CLCN5-201ENST00000307367 PTPRTO14522 1441 aa10.41□□□□□ -0.74
CLCN5-201ENST00000307367 L3MBTL2Q969R5 705 aa10.41□□□□□ -0.74
CLCN5-201ENST00000307367 ABCC3O15438 1527 aa10.41□□□□□ -0.74
CLCN5-201ENST00000307367 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.74
CLCN5-201ENST00000307367 WASHC2CQ9Y4E1 1318 aa10.39□□□□□ -0.75
CLCN5-201ENST00000307367 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
CLCN5-201ENST00000307367 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
CLCN5-201ENST00000307367 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
CLCN5-201ENST00000307367 ARHGAP31Q2M1Z3 1444 aa10.37□□□□□ -0.75
CLCN5-201ENST00000307367 NPATQ14207 1427 aa10.37□□□□□ -0.75
CLCN5-201ENST00000307367 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
CLCN5-201ENST00000307367 CFAP65Q6ZU64 1925 aaKnown RBP10.36□□□□□ -0.75
CLCN5-201ENST00000307367 NEURL4Q96JN8 1562 aa10.36□□□□□ -0.75
CLCN5-201ENST00000307367 KIF1BO60333 1816 aa10.35□□□□□ -0.75
CLCN5-201ENST00000307367 CNTLNQ9NXG0 1405 aa10.35□□□□□ -0.75
CLCN5-201ENST00000307367 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
CLCN5-201ENST00000307367 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
CLCN5-201ENST00000307367 SPATA31E1Q6ZUB1 1445 aa10.34□□□□□ -0.75
CLCN5-201ENST00000307367 NOS1P29475 1434 aa10.33□□□□□ -0.76
CLCN5-201ENST00000307367 CLTCQ00610 1675 aaKnown RBP10.33□□□□□ -0.76
CLCN5-201ENST00000307367 NBPF8Q3BBV2 869 aa10.32□□□□□ -0.76
CLCN5-201ENST00000307367 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
CLCN5-201ENST00000307367 DCAF11Q8TEB1 546 aa10.32□□□□□ -0.76
CLCN5-201ENST00000307367 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
CLCN5-201ENST00000307367 RGL3Q3MIN7 710 aa10.31□□□□□ -0.76
CLCN5-201ENST00000307367 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
CLCN5-201ENST00000307367 UGGT1Q9NYU2 1555 aa10.31□□□□□ -0.76
CLCN5-201ENST00000307367 SYNMO15061 1565 aa10.3□□□□□ -0.76
CLCN5-201ENST00000307367 ARID4BQ4LE39 1312 aaPredicted RBP10.29□□□□□ -0.76
CLCN5-201ENST00000307367 RALGAPBQ86X10 1494 aa10.29□□□□□ -0.76
CLCN5-201ENST00000307367 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
CLCN5-201ENST00000307367 PRAG1Q86YV5 1406 aa10.29□□□□□ -0.76
CLCN5-201ENST00000307367 MLECQ14165 292 aa10.29□□□□□ -0.76
CLCN5-201ENST00000307367 MROH2AA6NES4 1674 aa10.29□□□□□ -0.76
CLCN5-201ENST00000307367 ESF1Q9H501 851 aaKnown RBP10.28□□□□□ -0.76
CLCN5-201ENST00000307367 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
CLCN5-201ENST00000307367 IFT172Q9UG01 1749 aa10.28□□□□□ -0.76
CLCN5-201ENST00000307367 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
CLCN5-201ENST00000307367 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
CLCN5-201ENST00000307367 SLC52A1Q9NWF4 448 aa10.28□□□□□ -0.76
CLCN5-201ENST00000307367 ERVK-7P63135 1459 aa10.27□□□□□ -0.76
CLCN5-201ENST00000307367 SPATA31D1Q6ZQQ2 1576 aa10.27□□□□□ -0.77
CLCN5-201ENST00000307367 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLCN5-201ENST00000307367 MADDQ8WXG6 1647 aa10.26□□□□□ -0.77
CLCN5-201ENST00000307367 MYOM2P54296 1465 aa10.25□□□□□ -0.77
CLCN5-201ENST00000307367 DIEXFQ68CQ4 756 aaKnown RBP10.25□□□□□ -0.77
CLCN5-201ENST00000307367 PPLO60437 1756 aa10.25□□□□□ -0.77
CLCN5-201ENST00000307367 ZMYM3Q14202 1370 aa10.25□□□□□ -0.77
CLCN5-201ENST00000307367 LAMC1P11047 1609 aa10.25□□□□□ -0.77
CLCN5-201ENST00000307367 FER1L4A9Z1Z3 1794 aa10.24□□□□□ -0.77
CLCN5-201ENST00000307367 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
CLCN5-201ENST00000307367 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
CLCN5-201ENST00000307367 KIAA1210Q9ULL0 1709 aa10.24□□□□□ -0.77
CLCN5-201ENST00000307367 HSPA5P11021 654 aaKnown RBP10.24□□□□□ -0.77
CLCN5-201ENST00000307367 IDI1Q13907 227 aa10.24□□□□□ -0.77
CLCN5-201ENST00000307367 FBXO31Q5XUX0 539 aaPredicted RBP10.24□□□□□ -0.77
CLCN5-201ENST00000307367 ROCK2O75116 1388 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms